Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00757 ATGGAGATGGACAAGAACCAGCCTGAGAATCAACACCTTCTTCAAGAGACCACTAGCTTCACTACAAATGATGACGCCCCCCGATTGGACGGCGCTGATGATGCCAATGTTACTGTTCCTGATCCTGATGCTGCTGTAGAAACCGACGCCGATGTAAAATCTGCAGAGAAATTGGAGAATCAGGAGAACGAGGAGGAGGAGACGCAAAAGGAGGAGGAGACGCAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAACAAGGAGGATGAACCGGATCTTCATTATAATCTCCACACGATTCTTGCGGATGTCGATCAGTTTCTGTTAACTCCTCACGGTTCTCGTGATCGAGAGGAAGATTCCGCTGTTGAGATTCCGCACTTCATTGACAAATTCTTGGATCTTGTGGATGCGAAGATTGAGCAATACAATAACGCGGAATCGAATGCGAAGGAGAAACAGTGTCGAGTGCCGGAGGACGAGTCGTCGTTTCTCGAAGCGGTTGATCGGATATCGAAGATGAAAACTGCGATTCACGAAATGAAATTGGAAGAGGAGAAGAATTCGTTGATCAATCGCATAGGGAGTACTCAACAGCGAGCGATTTCTTATTTAGAAGAAGAGTTCAGGTTCTTTCTCGAGGAATCCAAAAATAGAGATGTGGATGTTGACGATACGAAAGGAGAAGGTTGTGTAGTACCAGAAGCTGAACCCGATCATCAACAGATTCCAGTTTACTCCAACGAGATCTTGAGCTATTTGAAAAAAATCGCCAATCAAATGATTTCCGGTGGATACGCATCGGAATGCTACCATGTCTACATCGTTGCGAGAAGAAACAAATTCGAAGAGGCCTTGTTGAACCTAGGGTTCGAGAAACACAGCATCGATGATATCCAGAAGATGAGTTGGGAATCAATGGAGTGTGAGATCGGCACATGGATCAGAACCTTCGAGCAATGCGCCATCGTTTTGTTCTCCGGCGAACGGAATCTCGCCGAATCTATATTTTCAGCGCATCCTACGATTTCCGCCAATCTGTTCAACAACCTAACTCACAGCATTGTGCTTCAACTGCTAAATTTCTCAGAAGGTGTTGCAATGACGAAACGCTCCGCCGAGAAGTTGTTCAAGCTTCTTGATATGTACGAAGCTCTTCGCGATATGCTCCCAAAAATGGAAAGCTTATTTCCAGAAAAATACGCCGAGGAGCTCAGAACAGAGATCGCAACCACTCGAACTCGTCTAGGCGAAGCGGCGATATGCATATTTTGCGATCTCGAAAACTCGATCAGAGCGGACACCGGAAAAATCCCGGTACCAGGCGGCGCCGTTCATCCATTGGCTCGATACACCATTAACTACTTGAAATACGCTTGCGAGTACAGAACCACACTGGAACAGATATTCAAAGAACACGCAAAGATCGAGCGAGCCGATTCAACAAGTCGACCACGTTACGAAGGCGAACAAGCACCGACTTACAACCCTAACTCTGACAATCAATCACCATTCTCCGTGGAACTGATGCGGGTAATGGAGCTCCTGGACTCAAATCTGGAAGCAAAATCAAAGCTATACAGAGACATAGCACTGAGTTCGATTTTCATGATGAACAACGGTCGATACATCTTGCAGAAGATCAAAGGATCTCCAGATATCCACGAACTGGTAGGCGATACGTGGTACAGGAAGAGATCTTCGGATCTTCGTCAATACCACAAGAACTACCAGAGAGAGACGTGGGGGAAATTACTGGGTTATTTGAACCACGAGGGATTGACCTGGCACGGGAAAGTGAATAAGCCAGTGCTGAAGGAGAGGTTTAAAGGATTCAACGCCCTGTTCGAAGAGATTCACAAAACACAGAGCTCGTGGATCATAAGCGACGAACAGCTTCAATCGGAGCTCCGAGTATCAATATCGGCGGTGATGATTCCGGCGTACAGATCATTCCTGGCTAGGTTTTCGCAGTACTTGGATCCGGGGAGACAAACAGAGAAATACATTAAGCTTCAGCCTGAAGACATAGAAACCTACATAGATGAACTATTCGACGGGAATCCAACCTCCATGGCAAGAAGGAGAACATAA 2103 46.55 MEMDKNQPENQHLLQETTSFTTNDDAPRLDGADDANVTVPDPDAAVETDADVKSAEKLENQENEEEETQKEEETQKEEEEEEEEEEEENKEDEPDLHYNLHTILADVDQFLLTPHGSRDREEDSAVEIPHFIDKFLDLVDAKIEQYNNAESNAKEKQCRVPEDESSFLEAVDRISKMKTAIHEMKLEEEKNSLINRIGSTQQRAISYLEEEFRFFLEESKNRDVDVDDTKGEGCVVPEAEPDHQQIPVYSNEILSYLKKIANQMISGGYASECYHVYIVARRNKFEEALLNLGFEKHSIDDIQKMSWESMECEIGTWIRTFEQCAIVLFSGERNLAESIFSAHPTISANLFNNLTHSIVLQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMLPKMESLFPEKYAEELRTEIATTRTRLGEAAICIFCDLENSIRADTGKIPVPGGAVHPLARYTINYLKYACEYRTTLEQIFKEHAKIERADSTSRPRYEGEQAPTYNPNSDNQSPFSVELMRVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSPDIHELVGDTWYRKRSSDLRQYHKNYQRETWGKLLGYLNHEGLTWHGKVNKPVLKERFKGFNALFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLARFSQYLDPGRQTEKYIKLQPEDIETYIDELFDGNPTSMARRRT 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3697182 3699284 + CmaCh15G007570.1 Cma15g00757 309907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00757 700 MobiDBLite consensus disorder prediction 10 25 - -
Cma15g00757 700 Pfam Exo70 exocyst complex subunit 316 686 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cma15g00757 700 MobiDBLite consensus disorder prediction 1 94 - -
Cma15g00757 700 SUPERFAMILY Cullin repeat-like 162 689 IPR016159 -
Cma15g00757 700 MobiDBLite consensus disorder prediction 483 505 - -
Cma15g00757 700 MobiDBLite consensus disorder prediction 46 64 - -
Cma15g00757 700 PANTHER EXOCYST COMPLEX PROTEIN EXO70 82 699 IPR004140 GO:0000145|GO:0006887
Cma15g00757 700 Gene3D Exocyst complex component Exo70 142 698 - -
Cma15g00757 700 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 82 699 - -
Cma15g00757 700 Coils Coil 136 159 - -
Cma15g00757 700 MobiDBLite consensus disorder prediction 65 92 - -
Cma15g00757 700 MobiDBLite consensus disorder prediction 490 505 - -
Cma15g00757 700 Coils Coil 52 93 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g01676 Cma-Chr6:10336286 Cma15g00757 Cma-Chr15:3697182 0 dispersed
Cma14g01446 Cma-Chr14:11058970 Cma15g00757 Cma-Chr15:3697182 0 dispersed
Cma15g00757 Cma-Chr15:3697182 Cma18g00319 Cma-Chr18:1702191 3.56E-110 dispersed
Cma15g00757 Cma-Chr15:3697182 Cma04g02280 Cma-Chr4:15904894 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00757 K07195 - csv:101206040 1038.1