Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00759 ATGGAGCGCCGGAATCCGCTCCGGCTTTGGTTTACGTCAGCGGTTTTTGTTGTTTTGATGCTCTTTACTGTAGGAGAGGCGGATCTTGCGTCGGACACGGCGGCGCTGGTGGTGCTTCAGAAAGCTATGGGCGTTCTGAGTCGGACTCGCCGTTGGAACCTTTCCGATGAGACTCCATGTTTGTGGCTTGGCGTCACTTGCCGCGGCGGGAGGGTTGCTGAACTGCGGCTTCCTGGCGTTGGACTCGTCGGGCAACTTCCTTTAGGGTTTGGAAATTTGACTCAACTTGAAACCCTATCTCTTCGCTCTAACTTGCTTGCAGGTTCTATTCCATCTGATTTTGCAAACCTCCGCTCCCTCCGGAATCTATACTTGCATCGGAACTTGTTTTCCGGCGAGATTTCTCCGGTTCTGTTCAGTATTCAGAGTCTTGTTCGCCTGAATTTGGCGCACAACAAGTTTGACGGTTCAATTCCTTCTGGATTCGATAATCTCACGAACTTGAAGGTTCTCAACTTGGAAGAGAATCAACTCGATGGATTCATTCCTGATTTCAACCTTCCCTCTCTCAAGGCTCTCAATGTTTCTTTCAATCGTCTCAACGGCTCAATCCCTACGCAGTTTTCCGATCAACCAGCCAGCGCCTTCGATGGCAATTCGCTCTGCGGGAAGCCACTGAGCCCTTGCGACGGCGAGGAGAAGAAATTATCCACAGGAGCAATCATCGGAATAGTTATCGGAAGTTTGGTTGCATTCTTGATTATAGTTCTGATTTTAATCTTTCTGTACCGAAAGACGAACAGGACTAATCGGTCAGCTGGTGCTCAGACGACGACCTCCGAGAGATTGTCGTCGGAGGTTGATAATGCCGGCGGCGGAAGCGGAGGAATTGGGAGTGAGAGGAATTTGGTGTTCTGTGGGAATGGAGAAAGAACGTTTGATTTGGAGGAACTGTTGAAAGCTTCAGCAGAGGTGCTGGGGAAGGGTTCTTTTGGATCAACTTACAAGGCATCTCTTGATGTAGGGATGACTGTGGCGGTTAAGAGGTTGAGAGATGTCATAGTTTCAGAGAAGGAATTCAAGGAGAAGATTGAAAGCTTGGGGATGATGAACCATCAGAACTTGGTTTCCATTAATGGTTACTATTATGGCGGAGATGAGAAGCTGCTGCTGTGTGATTATGTCTCCATGGGAAGCTTATCTGTACACTTACATGGCAACAAAAGTCCGGGCAGGACTCCATTGAAATGGGAAGCAAGGGCGGGCATTGCGCTCGCAGCCGCTCGGGGGATAACATATCTACATTCTCGACGACCTCCGACCTCCCATGGCAATATAAAGTCTTCAAACATTCTCCTCAATCGATCCCGGACAGCTTGTGTTTCCGACTTCGGCCTCATTCAGATTGCAGGTCCTACATCCACTCCAAACCATATTGCAACCTACCGTGCCCCTGAAGTCACTGATCCTCGAAAAGTATCCTTAAAAGCAGATGTTTATAGTTTCGGTGTAGTAATTCTAGAGCTTCTAACAGGGAAGGCTCCGAACTCACCAATGCTCAATGACGATGGCATAGACCTACCACGATGGGTGCACTCGAAGATCGAAGAGAAGAAAACGGCCGAAGTGTTCGACGAGGAGCTGTTAGAATACAAGAATGGCTTGGACGAAATGGTTCAACTTCTACATCTTGCCATGTTGTGTACAGCACCACACCCCGATAGTCGTCCATCGATGGCAAAGGTGACGAGTCGAATTGACGAAATATATCATTCGATCTTACTGAAAGAACAAGAGACGAGCAACGATAAATTTTATGATGTGGATAGTACTGTTTCTCAGCAATTTTACTCGGCTGATTCAATCATGGTTCCACCTTCAATCTAG 1887 47.85 MERRNPLRLWFTSAVFVVLMLFTVGEADLASDTAALVVLQKAMGVLSRTRRWNLSDETPCLWLGVTCRGGRVAELRLPGVGLVGQLPLGFGNLTQLETLSLRSNLLAGSIPSDFANLRSLRNLYLHRNLFSGEISPVLFSIQSLVRLNLAHNKFDGSIPSGFDNLTNLKVLNLEENQLDGFIPDFNLPSLKALNVSFNRLNGSIPTQFSDQPASAFDGNSLCGKPLSPCDGEEKKLSTGAIIGIVIGSLVAFLIIVLILIFLYRKTNRTNRSAGAQTTTSERLSSEVDNAGGGSGGIGSERNLVFCGNGERTFDLEELLKASAEVLGKGSFGSTYKASLDVGMTVAVKRLRDVIVSEKEFKEKIESLGMMNHQNLVSINGYYYGGDEKLLLCDYVSMGSLSVHLHGNKSPGRTPLKWEARAGIALAAARGITYLHSRRPPTSHGNIKSSNILLNRSRTACVSDFGLIQIAGPTSTPNHIATYRAPEVTDPRKVSLKADVYSFGVVILELLTGKAPNSPMLNDDGIDLPRWVHSKIEEKKTAEVFDEELLEYKNGLDEMVQLLHLAMLCTAPHPDSRPSMAKVTSRIDEIYHSILLKEQETSNDKFYDVDSTVSQQFYSADSIMVPPSI 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3708343 3711303 - CmaCh15G007590.1 Cma15g00759 309909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00759 628 MobiDBLite consensus disorder prediction 271 295 - -
Cma15g00759 628 Pfam Protein tyrosine and serine/threonine kinase 324 585 IPR001245 GO:0004672|GO:0006468
Cma15g00759 628 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Cma15g00759 628 PANTHER OS05G0588300 PROTEIN 14 590 - -
Cma15g00759 628 Gene3D Ribonuclease Inhibitor 34 141 IPR032675 -
Cma15g00759 628 Gene3D Ribonuclease Inhibitor 142 229 IPR032675 -
Cma15g00759 628 MobiDBLite consensus disorder prediction 271 287 - -
Cma15g00759 628 Gene3D Transferase(Phosphotransferase) domain 1 395 601 - -
Cma15g00759 628 ProSiteProfiles Protein kinase domain profile. 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00759 628 Pfam Leucine rich repeat 90 129 IPR001611 GO:0005515
Cma15g00759 628 Pfam Leucine rich repeat 143 200 IPR001611 GO:0005515
Cma15g00759 628 PANTHER LRR RECEPTOR-LIKE KINASE 14 590 - -
Cma15g00759 628 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Cma15g00759 628 SUPERFAMILY L domain-like 47 209 - -
Cma15g00759 628 Gene3D Phosphorylase Kinase; domain 1 299 394 - -
Cma15g00759 628 SUPERFAMILY Protein kinase-like (PK-like) 324 584 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00829 Cma-Chr14:4231658 Cma15g00759 Cma-Chr15:3708343 0 dispersed
Cma15g00759 Cma-Chr15:3708343 Cma18g00081 Cma-Chr18:358045 0 dispersed
Cma15g00759 Cma-Chr15:3708343 Cma04g02279 Cma-Chr4:15899495 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69151 PF07714 PK_Tyr_Ser-Thr 3.00E-34 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00759 - - mcha:111012024 964.526