Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g01159 ATGGAACCCACCTCCAACCCTCTTCAAATTTTCATAGATTCCCTCAATTTCTTGCTCCCATGGCGGTGGATTGACGCCGCCGATAACCAATCCCGTCTCCTCTTCACCGTCTTCTTCGCCGGTCTACTAATTTTCCTCTATACTAAAGTTACGCGTCGGCGCGTGCCTCTACCACCAGGTCCTCTGGGAGTTCCCCTGCTCGGAAACCTGCCGTTTCTCGACCCCGAACTTCACACCTATTTCAGAGACTTGGGGCAGAAATACGGCCCAATTGTAAAGCTCCAATTGGGTAATAAGGTGGGTATAATCGTCAATTCACCCTCCGTGGCACGCGAGATTTTGAAAGACAACGATGTCACGTTCGCCAATCGTGACGTTCCTCAGGCTGGGAGAGCCGCCTCGTACGGTGGTTCCGACATAGCTTGGACCCCGTATGGAGCCGAGTGGCGCATGTTGAGAAAAGTTTGTGTGCTCAAGATGCTCAGCAACGCCACTTTGGAGTCCGTATACGATCTCCGCCGTAGAGAGGTCAGAAACACCGTCGCTATCCTGTACGGGCGAGCCGGGTCGGCGGTGAATGTTGGAGAGCAGAGTTTTTTGACGATTTTCAATGTGGTTACGAGCATGTTGTGGGGTGGGACAGTGGAGGGGGACCAGAGGGATAGCCTTGCAGCTGAGTTCAGAGAGACAGTTTCTGACTTGACTGAGCTACTTGGAAAGCCTAATGTTTCTGACTTTTTTCCATGCTTGGCTCGTTTCGATCTCCAAGGCATTGAAAAGAAGATGCATAAGCTTGCTCACAAATTTGATACCATTTTCGAGAACATGATCAATCAACGATTGAAAATTTCCGGTGGGGAGGACGGCGAGAGTGCCAAGAATAAAGATTTCTTGCAGTTCTTACTTGAGGTGAAAGATTCCGGCGACTCCAAAACTCCTCTCACCATCACACACCTCAAAGCCTTGCTCATGGATATGGTGACTGGGGGGACAGACACAACGTCAAACACCATAGAGTTTGCGCTGGCAGAGATGATAAACAACCCTGCAACTCTGAAGAAAGCACAGGAAGAGGTAGCCGCCGTGGTGGGAGAAGACAACATGGTGGAGGAGTGCCACATTCATAGTTTGCCATATTTAAAAGCCGTAATGAAAGAAACATTGCGTTTGCACCCAATTCTACCGCTGTTAGTGCCACACTCCCCAAGTGAGACTACCACCATCTCCAAATACACAATCCCAAAGGGCTCTCGAGTGTTCATCAACGTCTGGGCCATTCAGCGACACCCCAACCAATGGGAAAATCCATTGGTGTTCGATCCGGAGAGGTTTCTGAACAACCAGAAGTGGGATTTTGGCGGGAGTGATTTTCGTTACTTCCCATTCGGATCCGGCAGAAGAAACTGTGCAGGAATTGCCATGGCGGAAAGAACGTTCATGTACTTGCTTGCTACGCTCTTGCATTCCTTTAATTGGAAGGTGGAAGAGGGTAAGAAACTGGAAATTGAGGAGAAATTTGGGATTGTTTTGAAGATGAAGACGCCTCTTGTTCTCATCCCGACGCCTAGACTATCCGACCCTACTCTGTATCAGTAA 1596 49.31 MEPTSNPLQIFIDSLNFLLPWRWIDAADNQSRLLFTVFFAGLLIFLYTKVTRRRVPLPPGPLGVPLLGNLPFLDPELHTYFRDLGQKYGPIVKLQLGNKVGIIVNSPSVAREILKDNDVTFANRDVPQAGRAASYGGSDIAWTPYGAEWRMLRKVCVLKMLSNATLESVYDLRRREVRNTVAILYGRAGSAVNVGEQSFLTIFNVVTSMLWGGTVEGDQRDSLAAEFRETVSDLTELLGKPNVSDFFPCLARFDLQGIEKKMHKLAHKFDTIFENMINQRLKISGGEDGESAKNKDFLQFLLEVKDSGDSKTPLTITHLKALLMDMVTGGTDTTSNTIEFALAEMINNPATLKKAQEEVAAVVGEDNMVEECHIHSLPYLKAVMKETLRLHPILPLLVPHSPSETTTISKYTIPKGSRVFINVWAIQRHPNQWENPLVFDPERFLNNQKWDFGGSDFRYFPFGSGRRNCAGIAMAERTFMYLLATLLHSFNWKVEEGKKLEIEEKFGIVLKMKTPLVLIPTPRLSDPTLYQ 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7350358 7353012 + CmaCh15G011590.1 Cma15g01159 310309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g01159 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Cma15g01159 531 PANTHER OS08G0547900 PROTEIN 30 531 - -
Cma15g01159 531 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 30 531 - -
Cma15g01159 531 Gene3D Cytochrome P450 44 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 SUPERFAMILY Cytochrome P450 58 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma15g01159 531 Pfam Cytochrome P450 58 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01521 Cma-Chr2:8661101 Cma15g01159 Cma-Chr15:7350358 0 dispersed
Cma15g01159 Cma-Chr15:7350358 Cma18g00200 Cma-Chr18:1079299 3.08E-108 dispersed
Cma15g01159 Cma-Chr15:7350358 Cma15g01161 Cma-Chr15:7359367 6.57E-120 proximal
Cma15g01158 Cma-Chr15:7346779 Cma15g01159 Cma-Chr15:7350358 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g01159 - - bhj:120067210 815.839