Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g01247 ATGGCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGAATAATTCAACGACCGGCGAAAGCTCCAGCTCCGGCGAACCGTGTTCCATGGCGGTGCTTTGCAAAACAGAGCACGAGAAGATTGTCGACAGTGAAGAAGAAATGTGGGGTGAGTGAAGTTGAAATGGTTAGGGATTTGAAGGTAATCGTGGAGGAGAAAATGGGGAGGAAGAAAGCGGAAAGGGATGCTTATCTTGTTGCTGCAATTGTGTCGAGCTTCGGGATCACGTCCATGGCTGCCATCGCTGTCTATTACAGATTCTCCTGGCAACTCGAGGGTGGAGATTTTCCGGTTTTGGAAATGTTTGGTACTTTCGCACTATCGGTTGGAGCTGCTGTGGGGATGGAATTCTGGGCGAGATGGGCACATAAACAACTGTGGCATGATGCGCTATGGAATATGCACAAGTCTCATCATAGGGCGAGGGATGGAGCGTTTGAATTGAACGATGTGTTCGCAATCATCAACGCGGTGCCTGCCATTGCTCTTCTTTCTTTCGGCTTCTTCAATCAGGGCTTCTTCCCCGGTCTATGTTTTGGTGCTGGTTTGGGAATTACGGTGTTTGGGATGGCCTACATGTTCGTCCATGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCCATAGCTGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATATCCATCATACGGACAAATTCGATGGCGTCCCGTACGGGTTGTTTTTAGGACCCAAGGAACTGGAAGACGTGGATGGCGAGGAAGAGCTGCAGAATGAAATTAAAAAGAGAAGCAAAGTTTACAGAAATTAA 849 50.65 MATGISAVATAAPYRRIIQRPAKAPAPANRVPWRCFAKQSTRRLSTVKKKCGVSEVEMVRDLKVIVEEKMGRKKAERDAYLVAAIVSSFGITSMAAIAVYYRFSWQLEGGDFPVLEMFGTFALSVGAAVGMEFWARWAHKQLWHDALWNMHKSHHRARDGAFELNDVFAIINAVPAIALLSFGFFNQGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFDGVPYGLFLGPKELEDVDGEEELQNEIKKRSKVYRN 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7922649 7924937 - CmaCh15G012470.1 Cma15g01247 310397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g01247 282 Pfam Fatty acid hydroxylase 127 254 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cma15g01247 282 PANTHER HYDROXYLASE, PUTATIVE, EXPRESSED-RELATED 10 278 - -
Cma15g01247 282 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 10 278 IPR045019 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g01247 Cma-Chr15:7922649 Cma16g00100 Cma-Chr16:447168 1.77E-119 wgd
Cma15g01247 Cma-Chr15:7922649 Cma18g01268 Cma-Chr18:9855086 1.27E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g01247 K15746 - csv:101214325 452.21