Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma15g01248 | ATGGCTACTAAAGAGTCCAGCTCTGCGGCTGCCACTGAGGGGAAGATTAAAGGGGTTCTTACCCATGGCGGCCGATATGTTCAGTATAATGTTTATGGTAACTTGTTTGAGGTTTCTGCTAAGTATGTTCCTCCTTTGCGACCCATTGGTAGAGGTGCTTATGGTCTTGTTTGTGCTGCTGTAAATTCTGAGACACATGAAGAGGTTGCCATCAAGAAAATTGGGAATGCTTTTGATAACATAATCGATGCCAAGAGGACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACATGAAAATATTATAGCCATCAGAGACATCATTCGGCCACCAAAAAGAGAGGTTTTTAATGATGTTTATATCGTTTACGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCTGACCAATCACTGACCGACGATCATTGCCAGTACTTTTTGTATCAGTTATTGCGTGGGCTGAAGTATGTACATTCAGCCAAGGTCCTGCACCGTGATCTCAAGCCAAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGCGATTTTGGATTAGCAAGAACGACTTCTGAAACCGACTTCATGACTGAATATGTGGTTACTCGTTGGTACCGAGCACCGGAATTGCTGCTCAATTGTTCGGAGTACACTGCTGCTATCGATGTTTGGTCTGTCGGATGCATTCTTGGTGAGATCATGACCAGAGAACCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTCAGACTTATAACTGAGCTACTAGGATCACCGGATGACGCCAGCCTAGGATTTCTCCGAAGCGATAATGCTCGAAGATACGTCAAGCAGCTTCCACAGTACAGGAAACAACAATTCTCAGCTAGATTTCCCAACATGTCTCCAGCTGCTCTTGATCTTCTAGAAAAGATGCTCGTATTCGATCCAAACAAACGCATTACAGTGGAGGAGGCACTTTGTCATCCATACTTGCAATCTCTTCACGACATCAACGACGAGCCACTCTGTGTCAGGCCCTTCAGTTTCGATTTCGAGCAACCGTCGTGCACTGAAGAGCATATTAAAGAACTCATCTGGAAAGAATCCGTTCGGTTCAACCCCGACGAATCAGGCAGAAGGACGACTCTTTGCGTCTAA | 1152 | 44.1 | MATKESSSAAATEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQSLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSARFPNMSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPLCVRPFSFDFEQPSCTEEHIKELIWKESVRFNPDESGRRTTLCV | 383 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 7927658 | 7932191 | - | CmaCh15G012480.1 | Cma15g01248 | 310398 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma15g01248 | 383 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 165 | 177 | IPR008271 | GO:0004672|GO:0006468 | |
Cma15g01248 | 383 | Gene3D | Phosphorylase Kinase; domain 1 | 26 | 366 | - | - | |
Cma15g01248 | 383 | ProSiteProfiles | Protein kinase domain profile. | 43 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma15g01248 | 383 | SMART | serkin_6 | 43 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma15g01248 | 383 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 337 | IPR011009 | - | |
Cma15g01248 | 383 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 18 | 374 | - | - | |
Cma15g01248 | 383 | Pfam | Protein kinase domain | 47 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma15g01248 | 383 | CDD | STKc_TEY_MAPK | 36 | 372 | - | - | |
Cma15g01248 | 383 | Gene3D | Transferase(Phosphotransferase) domain 1 | 127 | 356 | - | - | |
Cma15g01248 | 383 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED | 18 | 374 | - | - | |
Cma15g01248 | 383 | ProSitePatterns | MAP kinase signature. | 78 | 181 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cma15g01248 | 383 | ProSitePatterns | Protein kinases ATP-binding region signature. | 49 | 73 | IPR017441 | GO:0005524 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma02g01429 | Cma15g01248 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g00554 | Cma-Chr1:2885039 | Cma15g01248 | Cma-Chr15:7927658 | 5.13E-140 | dispersed | |
Cma05g00431 | Cma-Chr5:1956044 | Cma15g01248 | Cma-Chr15:7927658 | 0 | dispersed | |
Cma08g00890 | Cma-Chr8:5512522 | Cma15g01248 | Cma-Chr15:7927658 | 0 | dispersed | |
Cma12g00088 | Cma-Chr12:338930 | Cma15g01248 | Cma-Chr15:7927658 | 0 | dispersed | |
Cma13g00166 | Cma-Chr13:1268019 | Cma15g01248 | Cma-Chr15:7927658 | 0 | dispersed | |
Cma15g01248 | Cma-Chr15:7927658 | Cma17g00451 | Cma-Chr17:2685984 | 0 | dispersed | |
Cma16g00631 | Cma-Chr16:3258541 | Cma15g01248 | Cma-Chr15:7927658 | 3.52E-146 | dispersed | |
Cma15g01248 | Cma-Chr15:7927658 | Cma02g01429 | Cma-Chr2:8238896 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69160 | PF00069 | Pkinase | 4.30E-71 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma15g01248 | - | - | csv:101214254 | 761.911 |