Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g01310 ATGAGTTGCGGTTCGGATTTGATGTCTGGGAACTCCGAGGCTGATGATCGTGAGATTGTAGAGAAGGATCCAACAGGACGATACATACGGTACGATGAGATTTTGGGTAAAGGGGCATTCAAGACAGTATACAGAGCATTTGACGAAGTCGGCGGAATCGAAGTTGCTTGGAGCCAAGTTGACATTGAAGATGTTTTGCAGTCACCAGAACAGCTTCAAAGATTATATTCTGAGGTTCATCTGCTGAAGTCGCTGAAACATGAAAATATAATCAAATTCTATTGCTATTGGGTTGATGATAAGAACAAGACTATCAACATGATTACAGAATTGTTCACTTCTGGGAGTTTGAGGCAATATCGAAAGAAGCATAGGAAAGTTGATTTGAAAGCCTTCAAGAATTGGGCGAGGCAGATACTGCGAGGTTTGACGTATTTACATACTCACAACCCTCCAATTATTCATAGGGATTTGAAATGTGATAATATATTTGTCAATGGAAATACGGGAGATGTTAAAATTGGAGACCTCGGTTTGGCGATTGTCATGCAGCAGCCTACTGCTCGAAGTGTAATTGGCACTCCAGAGTTCATGGCTCCAGAACTTTATGATGAGGAGTATAATGAGCTTGTTGATATCTATTCTTTTGGCATGTGCATGTTGGAAATTGTGACTTGTGAATACCCATATAGTGAGTGCAAAAATTCTGCCCAAATATTCAAGAAGGTTACTTCTGGTATAAAGCCTGCTTCCCTCGAAAAGGTGCTGGATCCCCAAGTTAAGCAGTTCATAGAGAAGTGTCTGGTTCCAGCATCCATGAGACTACCTGCAAGTGAACTCTTGAAAGATCCATTCCTTGCAACTGAAAGTCCCAAGGAGCATAGTTTTGAACCTTTAAGGTTATCGAATGAGCAGTTCAAATCTGAAAATCCTCCTGGGCTAGCTTCTCATTCAATGGACACAGACCATAACTGCAGCAAATTCTCAGGCTCAGTGGTCTCATCTGTCAAAAGCGATAACGACATTTCTCAGTTTTCAACTCTCGAACTTCAGAGGCTCACTGAGACTAATGAATTGACACTGAAAGGGGACATGACTGATCATAATACAATTTCGTTCCATTTGCGCATTGCTGAATTATGCGGTAAGTCTAAGAATATCCATTTTGCCTTCTATCTCGACTCTGATACTTCATTGGCTATTGCTTTGGAGATGGTTGAACAACTCGAACTGTCGAATGAAGACGCGACTGTCATAGCAAAATTAATCGATGAATTAATTGCCAAGTTTGTTCCCGACTCGAAACCATGTCCAAACTATTATCACGGACAAAACACTACACACAGTTCTTCTGAAAGTGAAACTCAAGAGGATAAGACCTTCATTCCTCCTTTCTTCTCTGAGATGGTACTGTCATCTCCCATGGTGGCTGGTGCAGGGAATAACCCGATGCATTTCACCAAGGTGGAAGATCAAGAAAACCTGCAGTCGATCATTTCGTGTGCATCGCTTGACTTCAATCACTCAACTATCTCAGATTACAGCACAGGAAAAGGAACAATGGATTTCGATGCTGTTGGATCGATTTCGACGATGATCGATTTTGCAAACCCATCTCTAATTTCCTCCTGCTCGGGAATGTCGAAAGAAATGAGTTCGTCGAACTTTTCGAGTCTTTCTCTGGAAGAAAGAGATCACCAAGATGAACTGAAGATGGAGATTGATGCCATTGACTTACAGTACCATCAGTGCCTTTGTGAACTGTCAAGAATGAGAGAGGAAGCAATAGAGAGTGCGAAGAAGAGGTGGATGTCAAAGAAGAAAGCTCCTGCTTTTTGA 1839 41.71 MSCGSDLMSGNSEADDREIVEKDPTGRYIRYDEILGKGAFKTVYRAFDEVGGIEVAWSQVDIEDVLQSPEQLQRLYSEVHLLKSLKHENIIKFYCYWVDDKNKTINMITELFTSGSLRQYRKKHRKVDLKAFKNWARQILRGLTYLHTHNPPIIHRDLKCDNIFVNGNTGDVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEIVTCEYPYSECKNSAQIFKKVTSGIKPASLEKVLDPQVKQFIEKCLVPASMRLPASELLKDPFLATESPKEHSFEPLRLSNEQFKSENPPGLASHSMDTDHNCSKFSGSVVSSVKSDNDISQFSTLELQRLTETNELTLKGDMTDHNTISFHLRIAELCGKSKNIHFAFYLDSDTSLAIALEMVEQLELSNEDATVIAKLIDELIAKFVPDSKPCPNYYHGQNTTHSSSESETQEDKTFIPPFFSEMVLSSPMVAGAGNNPMHFTKVEDQENLQSIISCASLDFNHSTISDYSTGKGTMDFDAVGSISTMIDFANPSLISSCSGMSKEMSSSNFSSLSLEERDHQDELKMEIDAIDLQYHQCLCELSRMREEAIESAKKRWMSKKKAPAF 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8251622 8255167 + CmaCh15G013100.1 Cma15g01310 310460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g01310 612 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01310 612 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01310 612 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Cma15g01310 612 Gene3D - 369 463 - -
Cma15g01310 612 Gene3D Phosphorylase Kinase; domain 1 12 110 - -
Cma15g01310 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Cma15g01310 612 PANTHER WNK KINASE 11 607 - -
Cma15g01310 612 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 607 - -
Cma15g01310 612 Gene3D Transferase(Phosphotransferase) domain 1 112 292 - -
Cma15g01310 612 CDD STKc_WNK 27 286 - -
Cma15g01310 612 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01310 612 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 384 428 IPR024678 GO:0004674|GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00935 Cma15g01310 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g02124 Cma-Chr14:14602846 Cma15g01310 Cma-Chr15:8251622 0 dispersed
Cma15g01310 Cma-Chr15:8251622 Cma18g00193 Cma-Chr18:1004778 1.61E-155 dispersed
Cma15g01310 Cma-Chr15:8251622 Cma02g00935 Cma-Chr2:5561683 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69163 PF00069 Pkinase 1.40E-50 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g01310 K08867 - csv:101207748 1002.28