Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g01355 ATGCTGAAATTCATTCTTCTCGTAGCTTCGGCCGCCATTTTTGTTCTTCTCCTAATTTCCATCTTTTTCTTCTTCTTCTTCCGCCATAAGCTCTCACTAACAGAGCATCGACACGACGTCGAGAGGCCCTGCACCGACCAAAACAAGAAAAAGGAACACACGCCGCCGCCGTCGCCGCCGTCGCTGGCAACTTTCGAGGGCGGCGAGGATTTGACGATCGATGAGATTCTAGAAGCTCCGGGGGAAGTGATTGGCAAATCCCACTATGGAACTCTGTACAAAGCTTCGTTACAGAGCACCCAATCGACCCGGCTACTTAGATTCCTCCGGCCGGGTGCCGGTGGAGGAGAGTACGACGTCGTGCGGTTTCTGGGTTCGATTAGGCATAGGAATTTAGTGCCGATGCTGGGATTCTACGCCGGCGGGAGGGGTGAGAGGCTTCTGGTTCACCCGTTTTATGGGCAGGGGAATTTGGCGGATTTGATTAGAGTAGGAGAATCAGAGACAAAAAATTGGGAGGTCATTAACAAAATCTCCCTCGGAATCGCAAGAGCCCTAGATCATCTCCACAACGGATTACAGAAACCAATACCTCATGGAAATCTTAAATCCAAGAACATTCTTCTCGATTCAAACTTTGAGCCGCACGTCTCCGATTTCGGCCTCCATCTCCTCCTCAACGCCGCCGCAACTCGAGAAATGCTCCAAGTTTCCGCCGCCTCCGGCTACAAGGCGCCGGAACTGATTAATATGAACGACGCTGATGAACGGACAGACATCTTCAGCTATGGCAAGATCTTACTCGAGTTGCTTTCTGCCAAAGAGACTGGCGGAGACGGCGGCGATTGCGGTGTTTCTGAAGAGCGGACTCTCCGATGCATTCTTCAGATCGGTGAGGCCTGTTCTTCTTCTTCGCCGGATCTTCGGCCGAATTTCAAGGAAGTGATCGCGAAGATTGCAGAAATCGGAAGGATTGAGATGGATTCAGATGAATTGGATTGCAGCAGAAAGGGATGA 1017 51.03 MLKFILLVASAAIFVLLLISIFFFFFFRHKLSLTEHRHDVERPCTDQNKKKEHTPPPSPPSLATFEGGEDLTIDEILEAPGEVIGKSHYGTLYKASLQSTQSTRLLRFLRPGAGGGEYDVVRFLGSIRHRNLVPMLGFYAGGRGERLLVHPFYGQGNLADLIRVGESETKNWEVINKISLGIARALDHLHNGLQKPIPHGNLKSKNILLDSNFEPHVSDFGLHLLLNAAATREMLQVSAASGYKAPELINMNDADERTDIFSYGKILLELLSAKETGGDGGDCGVSEERTLRCILQIGEACSSSSPDLRPNFKEVIAKIAEIGRIEMDSDELDCSRKG 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8513992 8517177 - CmaCh15G013550.1 Cma15g01355 310505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g01355 338 ProSiteProfiles Protein kinase domain profile. 78 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01355 338 Gene3D Transferase(Phosphotransferase) domain 1 73 336 - -
Cma15g01355 338 SUPERFAMILY Protein kinase-like (PK-like) 81 319 IPR011009 -
Cma15g01355 338 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 277 - -
Cma15g01355 338 Pfam Protein kinase domain 83 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01355 338 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 3 277 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g00355 Cma15g01355 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g01355 Cma-Chr15:8513992 Cma16g00213 Cma-Chr16:967058 2.79E-103 dispersed
Cma15g01355 Cma-Chr15:8513992 Cma02g00977 Cma-Chr2:5836545 2.84E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69166 PF00069 Pkinase 1.80E-22 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g01355 - - cmax:111468894 640.958