Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma15g01381 | ATGGAGGAGAAAGAGGGAGTGGATTTCGGATTTGCAGTAGAAGTGAGCCAAGCTCCAGAGAGCTTAGGAATGATGGATTTGAGACCTGAAAATACAAGCACAGATAGTGAGTCACCGCCGCCGCAGCCGCAGTCGCAGTCGCAGTCACAGCCGCTGGCGAGTGTTCCAACGGTGGCGGCTACAGATGGGAAGAAGAAAAGAGGGAGGCCGAGAAAGTACGGTCCCAATGGGACTGTAGCTCCAACTTTGTCGCCAATGCCGATTTCGTCTTCGATTCCGCTGAGTGGAGAATTTCCGGTTTGGAAACGGGGAAGAGGGCGGTCAGTAGAGTCGATTAAGAAGCCGCGACGAGGGTACGAATTTGAGATTCCAGGTAACAAGGTTGCCTTCATTGCTGGGGCAGATTTCACACCTCACGTGATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAATCATGTCATTTTCTCAACAAGGATCTCGGGCAATTTTTATACTCTCTGCTAATGGTATGGTTTCGAATGTTACACTTAGGCAGTCAACATCTTCTGGGGGCACTCTTACGTATGAGGGTCGATTTGAGATACTTTCATTGTCTGGATCATATATGCCTTCTGAGAGCGGTGGAACAAAGAGCCGATCTCGAGGGGTGAGTGTTTCTTTGGCTGGCTCAGATGGCCGAGTGATGGGTGGAGAACTTGCCGGCAGGCTGATAGCAGCTGGTCCAGTACAGGTGGTGGTGGGCAGTTTCCTACCACCAGTTCACCAGAAGGAACATAAACCAAAGAAGAGTAGGATGGAACCTAAATCGAACGCAATTTTACCTCCAGCCGATGTTCTTTCTGGCGAAGGGACGAACGGAGTCCTTGGCGGAGTGGAGGCCATAGTCCCATCTACTCTAATTGAAGATAAACCAGCCTCTTTAGACCAAAATCCAGCTTTTAAAACTCCACAAGTCAACGAAAAGTTACCTTTTCCACAAGAATCAAGAGGTGTACTCAACCATTCAAACCATGAGGTTTCTTGTTGA | 1032 | 48.45 | MEEKEGVDFGFAVEVSQAPESLGMMDLRPENTSTDSESPPPQPQSQSQSQPLASVPTVAATDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPGNKVAFIAGADFTPHVITVNIGEDVNLKIMSFSQQGSRAIFILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSESGGTKSRSRGVSVSLAGSDGRVMGGELAGRLIAAGPVQVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIEDKPASLDQNPAFKTPQVNEKLPFPQESRGVLNHSNHEVSC | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 8645120 | 8651564 | + | CmaCh15G013810.1 | Cma15g01381 | 310531 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma15g01381 | 343 | MobiDBLite | consensus disorder prediction | 256 | 280 | - | - | |
Cma15g01381 | 343 | Gene3D | - | 138 | 269 | - | - | |
Cma15g01381 | 343 | ProSiteProfiles | PPC domain profile profile. | 133 | 272 | IPR005175 | - | |
Cma15g01381 | 343 | MobiDBLite | consensus disorder prediction | 27 | 56 | - | - | |
Cma15g01381 | 343 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 | 8 | 327 | - | - | |
Cma15g01381 | 343 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 135 | 265 | - | - | |
Cma15g01381 | 343 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 8 | 327 | IPR039605 | GO:0003680 | |
Cma15g01381 | 343 | MobiDBLite | consensus disorder prediction | 1 | 90 | - | - | |
Cma15g01381 | 343 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 138 | 251 | IPR005175 | - | |
Cma15g01381 | 343 | CDD | DUF296 | 137 | 251 | IPR005175 | - | |
Cma15g01381 | 343 | MobiDBLite | consensus disorder prediction | 307 | 343 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma15g01381 | Cma18g01194 | CCT | |
Cma15g01381 | Cma18g01194 | ECH | |
Cma02g01007 | Cma15g01381 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma14g01978 | Cma-Chr14:13908339 | Cma15g01381 | Cma-Chr15:8645120 | 8.08E-70 | dispersed | |
Cma15g01381 | Cma-Chr15:8645120 | Cma18g01194 | Cma-Chr18:9477137 | 7.04E-101 | dispersed | |
Cma15g01381 | Cma-Chr15:8645120 | Cma02g01007 | Cma-Chr2:5983347 | 3.40E-166 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma15g01381 | - | - | csv:101211908 | 510.375 |