Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g01387 ATGTCCCAACCACCTCCCTCCGATCATGATTCATCCTCCTCTGTCGCCAAGCTTCGCAAGATTCCCGCCATTCCTCTTCTCCGCGATTCCATATCCAATGCCGGAGACTCCGATTCCGATGAAGAATATGACCTTGACGAGGATTTTCCTTATGAAACTGACGATTCCTCCATCATTATGGCCTCCTCTCTCGGGTTGAACCACATTCGGACGCGGTCTGGTCCTTTGCCGCAACGGACCTTGGCCGCTGGCACGCCCTCCAATTTGGGAGAAACTTCCAGGACTAATGCCACCGCGGGGACCAATTCCGAGCCAAAACATTCCTCCACTGATCATGGGAAAAAAGTTCTGTGGAGTCAATCGAAATCGTTTAGATATCCAACAGCTCTGAATCATGATTTTGAGGTTAATCATGTAGCGTTTGGAAAGGAAATTCAGTCTCCACGATTCCGTGCCATACTGCGTGTTACTAGTGGAAAAAAGAAGAGAACTCTGGATATCAAAAGCTTCTCTCACGAGCTTAATTCCAAGGGAGTTCGCCCTTTTCCAGTTTGGAAGCCTCGGGCCTTTGGATATCTGGAAGAGATCATGGTGGCTATCAGAGCAAAATTTGACAGATTGAAGGATGATGTTAATTACGAACTGGGTATTTTTGCTGGAGATCTGGTAGATACACTTGAAAAGACAGACCGGTCTCTGCCTGAAATAAGAGAAGGTTTGGAGGACCTATTGGTGGTTGCTCGGAAATGTGCAACAATGTCACCTACTGATTTTTGGGCGAAAGGTGAAGGGATTGTCCAAAATCTAGACGACCGGCGGCAGGAGCTGCCATTAGGGGTTCTTAAGCAAGCCCATACCCGCCTTCTTTTCATCTTGACACGATGTACTAGGCTTATTCAGTTTAGAAAGGAAAGTGGTTATGAAAATGAGCACATTTTGGGTCTTCATCAACTTAATGATCCAGGAATTTATCCAGAGAAAATTAGGAAGCTCGAACAACTTGACTTTGGCGATCCATTGACTACGAAAGAAGATATTGAGCAGCAGCTGAACTTGGTTGGGAAGGATCGAGCCAGTCGCATGGTGAAGCACCATTCAGGTCCAAGTTTTAGTAGTAGTGCTGGAAATGTTGATCTGGACTCTGCCATAAGTAATGATTCATCTACAAGCACATATAGGATGTCATCCTGGAAAAAGCTACCATCAGCAGTTGCCAAGAACCGGAAAGACTCTGACACTACTGAAACACCTTCTAAGGATAAACTTGAAACGTTGCATGTACATGAAGCTAAGACTGGGAGCATCAATCAATTAGATACCCCATCTATTCCTATTGCGCATTCTGAAGCACCTCCTAAAGAACAAAAACTATCTTGGGGAATATGGGGTTATCAAAATGCTACTTTTGAGAATCTGATGATATGTCGGATTTGTGAGGTTGAAATTCCTACCATTCATGTTGAGGAGCATTCTCGAATATGTACGATTGCCGATAGGTGTGATTTGAAAGGTTTAACTGTGAACGAGCGCCTTGCACGGGTTGCTACAGCTCTTGAAAAAATACTAGAGTCTTGGACGCCTAAAAGTACACCGAGAAGTAGCAATGTTTCCTGTGGAAATTTCGATACTGTTAAGGTTTCTACATCAAGTATGCAAGAAGATTTTTTTGAGATATCATCTAAAGGAATCAATTTGTCTTATCAAAACTCAGAAGATTTGCTTGATTCCCTCCCTGTTACTGGCAACTCTTTTTGTATGGAAAGTCAGGATACCTTTCCTGATCCATCATACAATCGACCATTTAATTTCACACCAGAACACAGTACAAAATCACTGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCCAGATCCAGCCAGATTGAGTTGGCGTTGCATGGGCGAAGAACAATATCTGAACTTGAAAATTATCAGCAGATTTACAAATTATTGGATATTGTTCGTTCCATTGCAAACGTTAACAACTCTGGCTATGGTGCATTGGAGTCTATGCTTGATCGATTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCTCTTGTCGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAAATGGAATCGTCGATGAAGAGAGTTCAGTGGAAGATGATGCTGTTCGTAGTTTACGTGCAAGTCCTGTTAACACATGTTCAAAAGATCGAACATCGATTGAAGATTTTGAAATAATTAAACCAATTAGTAGAGGTGCATATGGTCGAGTTTTCCTTGCCAGAAAACGAGCAACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGTAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATTTGTATCTGGTCATGGAATACTTAAATGGTGGCGATATTTATTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGAATTTATATCGCTGAAATTGTTCTTGCTTTGGAATATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTGTTGATTGGTCAAGATGGTCACATTAAGGAGGTATTCTTTGTCATTGGAAGGAAAGGCTTTCTCAAGTATTCTATTGAGAAGTTATTTGGGGATTTTAGGCAGTTAACAGATTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCACAGGTCCATCAATCAATGGAACTGCTTCACTTGGAGACAATGGTCCAACATCTCAATCTTTGTCAAAAAGAGAACACAGACAGAAGCATTCTGTCGTTGGTACTCCAGATTATTTGGCCCCTGAGATACTTCTAGGCATGGGACATGGTGTAACTGCTGATTGGTGGTCTGTTGGTGTAATCCTTTTCGAGATGCTTGTAGGATTACCGCCGTTCAATGCAGAAAGTCCACAGAAAATTTTTGATAATATCATTAATAGAGACATACCATGGCCCAAGATACCAGACGAGATGAGTTATGAAGCCCATGATTTGATTGACAAATTGCTGACTGAAAATTCTGTTCAAAGACTGGGAGCTACTGGAGCCGGAGAGGTGAAGCAGCATCTTTTCTTCAAAGATATTAACTGGGATACACTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACAGGATACAAGTTATTTCATGAGCCGCTATGTATGGAATCCAGAAGATGAGGATTTTAACTGTGGAAGTGACTTTGATGATCATGATTTGACAGATACTTGCAGCAGTAGTTCACTTAGTAACCAACAAGATGAAGATGGAGACGAATGTGGCAGTTTGGCTGACTTCGGTACATCATCAGCCCTTTCTGTGAAGTATTCGTTCAGCAATTTCTCTTTCAAGAATTTATCACAATTGGCTTCCATCAATTATGACTTGGTGGTGAAGAGCAGTCAAAACTCACCAGATGTATCCAAGCCATCCATTCCTTGA 3597 41.78 MSQPPPSDHDSSSSVAKLRKIPAIPLLRDSISNAGDSDSDEEYDLDEDFPYETDDSSIIMASSLGLNHIRTRSGPLPQRTLAAGTPSNLGETSRTNATAGTNSEPKHSSTDHGKKVLWSQSKSFRYPTALNHDFEVNHVAFGKEIQSPRFRAILRVTSGKKKRTLDIKSFSHELNSKGVRPFPVWKPRAFGYLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDTLEKTDRSLPEIREGLEDLLVVARKCATMSPTDFWAKGEGIVQNLDDRRQELPLGVLKQAHTRLLFILTRCTRLIQFRKESGYENEHILGLHQLNDPGIYPEKIRKLEQLDFGDPLTTKEDIEQQLNLVGKDRASRMVKHHSGPSFSSSAGNVDLDSAISNDSSTSTYRMSSWKKLPSAVAKNRKDSDTTETPSKDKLETLHVHEAKTGSINQLDTPSIPIAHSEAPPKEQKLSWGIWGYQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLARVATALEKILESWTPKSTPRSSNVSCGNFDTVKVSTSSMQEDFFEISSKGINLSYQNSEDLLDSLPVTGNSFCMESQDTFPDPSYNRPFNFTPEHSTKSLSAGTLTPRSPLLTPRSSQIELALHGRRTISELENYQQIYKLLDIVRSIANVNNSGYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSNGIVDEESSVEDDAVRSLRASPVNTCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKEVFFVIGRKGFLKYSIEKLFGDFRQLTDFGLSKIGLINSTDDFTGPSINGTASLGDNGPTSQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQKIFDNIINRDIPWPKIPDEMSYEAHDLIDKLLTENSVQRLGATGAGEVKQHLFFKDINWDTLARQKAMFIPSAEPQDTSYFMSRYVWNPEDEDFNCGSDFDDHDLTDTCSSSSLSNQQDEDGDECGSLADFGTSSALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPSIP 1198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8686996 8696167 + CmaCh15G013870.1 Cma15g01387 310537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g01387 1198 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 912 - -
Cma15g01387 1198 PANTHER SERINE/THREONINE-PROTEIN KINASE 924 1198 - -
Cma15g01387 1198 MobiDBLite consensus disorder prediction 1 47 - -
Cma15g01387 1198 CDD STKc_MAST_like 767 1079 - -
Cma15g01387 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672|GO:0006468
Cma15g01387 1198 SMART serkin_6 761 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01387 1198 MobiDBLite consensus disorder prediction 947 972 - -
Cma15g01387 1198 Gene3D Phosphorylase Kinase; domain 1 759 1101 - -
Cma15g01387 1198 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 13 912 - -
Cma15g01387 1198 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 924 1198 - -
Cma15g01387 1198 MobiDBLite consensus disorder prediction 70 113 - -
Cma15g01387 1198 MobiDBLite consensus disorder prediction 947 961 - -
Cma15g01387 1198 SUPERFAMILY Protein kinase-like (PK-like) 745 1101 IPR011009 -
Cma15g01387 1198 ProSiteProfiles AGC-kinase C-terminal domain profile. 1075 1178 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cma15g01387 1198 Gene3D Transferase(Phosphotransferase) domain 1 845 1092 - -
Cma15g01387 1198 Pfam Protein kinase domain 761 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01387 1198 ProSiteProfiles Protein kinase domain profile. 761 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01387 1198 MobiDBLite consensus disorder prediction 78 106 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01015 Cma15g01387 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00745 Cma-Chr1:3970817 Cma15g01387 Cma-Chr15:8686996 0 dispersed
Cma15g01387 Cma-Chr15:8686996 Cma08g01079 Cma-Chr8:6729107 1.25E-79 dispersed
Cma15g01387 Cma-Chr15:8686996 Cma02g01015 Cma-Chr2:6025152 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69169 PF00069 Pkinase 5.30E-56 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g01387 - - csv:101210442 1936.0