Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g01422 ATGAGGACTGGAAACCGGAAGAGGAAGCTGCGGCTAAGCAAGATCTACTCATTTGCTTGTGGAAAATCATCATTGAAAGATGAAGATCATTCACAAATTGGGATGCCCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCGGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAATAACTCCATCAGCTCTACAAAGTATACACCCATCACTTTTTTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGAATATTAGCCTTCACCCCTCTTGCTCCTTATACTGCTGTCAGTGCAATTATCCCTCTTATTGCAGTCATTATTGCGACAATGGTTAAAGAAGGTATTGAAGATTGGCGACGGAAGGCACAGGATATTGAGGTCAATAATAGAAAGGTTAAGGTTCATCAAGGCAATGGAGTCTTTGATTATACTGAATGGAAATCTTTGCGGGTCGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCAGACCTTCTGTTGATGTCATCCTGCTATGAGGATGGATTCTGTTATGTAGAAACGATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCCTTGGATGCAACTGCATTTGCAAATGAGGATTCTAACTTCCGTGACTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGGAGCATGGACTTTGAAGAGCAACAATATCCACTTTCACCACAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGTCATGACTCAAAGGTTATTCAAAATTCTACTGATCCGCCTTCAAAAAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTGTTATTAGGCATTCTATTTGTGCTGGCATTTCTTGGATCTATAGTCTTTGGCGTCATGACTAAGGATGATCTGAAAAATGGGAGGTCAAAAAGATGGTATCTTCGACCAGATGACTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCAATTTTTCACTTTCTGACGGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATTCACATGTACTACGAAGAAGGTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACTATACTCTCTGACAAGACTGGCACTTTGACCTGCAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACAGCTTATGGCAGTGGTGTCACTGAAACTGAGAGATCTATGGAAGGCAGAAATGGTTTGCCAATGCTTAATGGCAATGGCAATGGAAATGTCTATAAGCACAATGAGAATGCTACAGATACAAATCCCCCTGTCAAAGGCTTTAATTTTAAGGACAGAAGAATTATGAACGGAAACTGGGTTAAGGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCCGATGTCGATGAAAACACAGGAAAGATTTCATATGAAGCTGAATCGCCGGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAGTTGGTTTTGAATTCTATCAGAGGACACAGACAAGTATATCAGTTCGTGAATTGGATCCTAGGTCTGGAAGTAAAGTCGAAAGGTCATACAAGCTTTTAAATGTTTTGGAGTTTAATAGCGCCCGGAAGAGAATGTCTGTCATAATAAGAGATGAAGATGGAAAAGTATTATTGCTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGCAGATTTGAAGAGAAAACGAAGGAGCATATCAATGAGTATGCTGATGCAGGCTTACGGACATTGGTACTTGCTTATCGTGAACTTGATGAGGAGGAATACAAGGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAGTTAGTGCAGAGAGGGAGTCATTGATTGATAAAGTAACTGATCGCATTGAAAGGGATTTAATTCTTCTTGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGCGACAAGATGGAGACTGCGATAAATATTGGTTTTGCATGTAGTTTGCTTCGTCAAGGGATGAAACAGATTATTATAACTCTGGAAACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGCATCAAAAGAAAGCATCGTGCACAAGATCACTCGGGCAAGGTCTCAGCTCACTGCCTCAAGTGGAAGTTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACTTATGCTCTAGAGGATGATGTGAAAAATGCATTCCTTGAGCTTGCCATTGGATGTGCGTCTGTTATTTGCTGTCGCTCATCTCCAAAGCAAAAGGCAATGGTCACTAAGTTGGTTAAACTTACAACGGGAAAAACAACATTAGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGTCATGTCGAGTGATATTGCAATCGCTCAGTTCAGATATTTGGAGCGTCTACTACTCGTGCATGGACATTGGTGTTACAGGAGATTATCATCAATGATATGCTACTTTTTTTACAAGAATTTCACATTTGGCTTTACGATTTTCTTATATGAGGCATACACTTCGTTCTCTGCACAACCTGCATATAACGACTGGTTTATGTCTCTCTACAATGTCGTGTTCTCTGCTCTGCCCGTTGTGGCTCTCGGGGTGTTTGACCAAGACGTATCTGCAAGATACTGCCTTAAGTTTCCTATGTTGTATCAACAAGGTGTGCAGAACGTCCTCTTCAGCTGGCTTCGGATAATCGGCTGGATGTTTAATGGTCTGTGCAGTGCGTTGATCATTTTCTTTTTCTGCACAAGTGGAATGCAGCATCAAGCATTTAATCCCGAGGGGAAGACCGTAGGGAGGGATATTCTCGGGGCGACGATGCTGTCGTGTGTTGTTTGGGTTGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACAATGTTGCAAGTTATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTTTTTCTGATGATATATGGAGCCTTCCCTGCCAGCATTTCGACAAATGCATATCGCGTGTTCCTCGAAGCCCTTGCTCCTGCAGGGTCTTATTGGGTTCTGCTGATATTTGTGGTGATCTCTACCCTCATTCCATTCTTTGTATACTCAGCATTGCAGATGAATTTCTTCCCCATGTACCATGAAAAAATACAGTGGATAAGGCACGATGGTCAGGGTCAGATAGACGATCCCGAGTTTGTCAATATGGTCAGGCAAAGCTCGATAAGACCGAGTACTGTGGGATTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGAAAAACCATAG 3555 41.6 MRTGNRKRKLRLSKIYSFACGKSSLKDEDHSQIGMPGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFLPKSLFEQFRRVANFYFLIAGILAFTPLAPYTAVSAIIPLIAVIIATMVKEGIEDWRRKAQDIEVNNRKVKVHQGNGVFDYTEWKSLRVGDIVKVEKDQYFPADLLLMSSCYEDGFCYVETMNLDGETNLKVKQALDATAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLLGILFVLAFLGSIVFGVMTKDDLKNGRSKRWYLRPDDSTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEGDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERSMEGRNGLPMLNGNGNGNVYKHNENATDTNPPVKGFNFKDRRIMNGNWVKEPHADVIQKFFRLLATCHTAIPDVDENTGKISYEAESPDEAAFVIAAREVGFEFYQRTQTSISVRELDPRSGSKVERSYKLLNVLEFNSARKRMSVIIRDEDGKVLLLCKGADSVMFERLAKNASRFEEKTKEHINEYADAGLRTLVLAYRELDEEEYKEFDRKFYEAKNSVSAERESLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLETPEIQALERTGEKDMITKASKESIVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDDVKNAFLELAIGCASVICCRSSPKQKAMVTKLVKLTTGKTTLAIGDGANDVGMLQEADIVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTIFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWLRIIGWMFNGLCSALIIFFFCTSGMQHQAFNPEGKTVGRDILGATMLSCVVWVVNLQMALSVSYFTMLQVIFIWASIFIWYLFLMIYGAFPASISTNAYRVFLEALAPAGSYWVLLIFVVISTLIPFFVYSALQMNFFPMYHEKIQWIRHDGQGQIDDPEFVNMVRQSSIRPSTVGFTARLAAKIRREKP 1184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8999195 9005969 + CmaCh15G014220.1 Cma15g01422 310572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g01422 1184 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Cma15g01422 1184 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Cma15g01422 1184 Gene3D - 115 288 - -
Cma15g01422 1184 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cma15g01422 1184 SFLD p-type atpase 408 906 IPR044492 -
Cma15g01422 1184 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1132 IPR023298 -
Cma15g01422 1184 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 704 IPR023299 GO:0000166
Cma15g01422 1184 Pfam Cation transport ATPase (P-type) 539 629 - -
Cma15g01422 1184 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Cma15g01422 1184 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 1181 - -
Cma15g01422 1184 Gene3D - 549 677 IPR023299 GO:0000166
Cma15g01422 1184 CDD P-type_ATPase_APLT_Dnf-like 59 1015 - -
Cma15g01422 1184 Gene3D - 699 893 IPR023214 -
Cma15g01422 1184 SFLD Haloacid Dehalogenase 408 906 - -
Cma15g01422 1184 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Cma15g01422 1184 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Cma15g01422 1184 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Cma15g01422 1184 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1181 - -
Cma15g01422 1184 SUPERFAMILY HAD-like 421 910 IPR036412 -
Cma15g01422 1184 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 833 939 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma15g01422 Cma18g01061 CCT
Cma15g01422 Cma18g01061 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g01049 Cma-Chr13:7987560 Cma15g01422 Cma-Chr15:8999195 0 dispersed
Cma15g01422 Cma-Chr15:8999195 Cma18g01061 Cma-Chr18:8794419 0 dispersed
Cma15g01422 Cma-Chr15:8999195 Cma04g01553 Cma-Chr4:7868099 0 wgd
Cma15g01422 Cma-Chr15:8999195 Cma04g00969 Cma-Chr4:4960347 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g01422 K01530 - csv:101205800 2213.34