Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma15g01427 | ATGAACCTCAATGTTTTTGTGTTCTGGATCATACAGATCTCCATCCATGCCGTTTCAGTTGTTTCTGAAACCAAGGCGTCCGACGTTTCTGCATTGAATGTGATGTTTAGCAGTTTAAATTCACCTTCACAACTCTCTCGTTGGAAGTCAAGTGGGGGAGACCCATGTGGGGATTCTTGGGAAGGGATCAAATGCTCAGGATCATCCATCACTGAAATAACTTTATCAAACTTTGAACTGAGTGGAACATTAGGCTACCAGCTTGCAAATTTGGCTTCTGTCACCTCCTTTGATTTGAGCAATAACAACCTGAATGGCGATATCCCTTATCAGCTTCCCCCTAATGCAGTTTCCATCGATCTTTCCACGAACAGCTTCACCGGTAGCGTGCCATATTCAATATCTCAGATGTCTAATCTTCAAGTTTTAAATCTTGGGCATAATCAGCTGAGCAACCAATTGAGTGACATGTTTGGCAACGTTTCTAAACTCAACAGGATGCATATACAAAATAATGGATTTACAGGTTCCATTAATGTTCTTGCTGATCTTCCACTCAAAGATTTGAGAGTCACAAATAACAAGTTCACTGGATGGATTCCTGATAGCCTTCAGGACATAGATAATTTGGAAACTGGAGGCAATTCATGGTCATCTGGACCAGCTCCTCCTCCACCACCAGGAGATAGGGCAAAGAAAAACAAGAACAAAAACGGGTCAAGCAACTCATCCCCAAAAGTAAGTGGAATGGCCATAGCAGGAATTGTGATGGGAGTATTAGCAGTAATCGCCATAATCATAGCATTGTTCTCAAGAAGGTCACCTCCTTCCCACTTTCTTGATGAAGATACAAACCAACACAGCGGCTCCTTGACTCCACGCACACCCCATCAACCGTCCAAAGACTTGCACAATAACACTAATAATAATAATGCCATTGAAAGAAAATCATGCAACTCAGATGTCTCTGTTGACATAAAGCCTCTTAGTGGGCTTAGGCCTCCTCCACCCTTTGATCCTGTTAAGCCCTCCGGTGATGCTCAGCTTGCAAGCCGCCTCAGTTCCAGGAGGAGCACTTCCGTGCGTGTCATTTCCTACTCATTGGCTGATTTGCAGACTGCTACTGCTAACTTTGCTACTGGTCGCCTTCTTGGTGAGGGCTCAATTGGACGTGTTTACAAGGCCAAGTATGGAGATGGGAAGGTGTTAGCAGTGAAGAAGATTGATTCATCAGTTTTTCAAGGAAGAACAGAGGAGTTTTCTTCAGTAGTTGCTGTCATTTCAAAGCTTCATCACACAAACATTACAGAAGTTGTTGGGTTCTGTTCAGAGCAGGGACAGCACATGCTGGTTTATGAATATTTCATGAATGGCTCACTTTATGAGTTTCTTCATATGTCAGATGACTTCAGTAAGCCACTCACATGGAACACTAGAGTCAAAATTGCTTTGGGGACTGCAAAAGCTCTTCAGTACCTTCACGAGGTTTGCTCGCCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTGCTCGACACGGAACTCAATCCCCATCTCTCGGACTACGGTTTAGCAGCATTTTACAAGCTAAGAAGTGGAAGGCCTGGAGGTGGATATGATGCACCAGAATGCACACAGGGTTCAAGTTACACAATGAAGAGTGACATTTACAGTTTGGGAGTGGTGATGTTGGAGCTGTTGACCGGGCGGATGCCTTATGACTCTGGGAAGGCAAAGGTGGAGCAATGTCTAGTCCGATGGGCAACCCCACAGCTGCATGACATAGATGCACTGGACAAAATGGTAGATCCTGCATTGCGTGGGCTATATCCGCCAAAGTCCGTGTCTAGATTTGCCGATATCATCGCCCTTTGCGTGCAATCGGAGCCTGAATTTCGGCCTCCCATGTCGGAGGTGGTGCAGGCCTTGGTGACTTTGGTTCAACGATCAGCATGA | 1962 | 44.8 | MNLNVFVFWIIQISIHAVSVVSETKASDVSALNVMFSSLNSPSQLSRWKSSGGDPCGDSWEGIKCSGSSITEITLSNFELSGTLGYQLANLASVTSFDLSNNNLNGDIPYQLPPNAVSIDLSTNSFTGSVPYSISQMSNLQVLNLGHNQLSNQLSDMFGNVSKLNRMHIQNNGFTGSINVLADLPLKDLRVTNNKFTGWIPDSLQDIDNLETGGNSWSSGPAPPPPPGDRAKKNKNKNGSSNSSPKVSGMAIAGIVMGVLAVIAIIIALFSRRSPPSHFLDEDTNQHSGSLTPRTPHQPSKDLHNNTNNNNAIERKSCNSDVSVDIKPLSGLRPPPPFDPVKPSGDAQLASRLSSRRSTSVRVISYSLADLQTATANFATGRLLGEGSIGRVYKAKYGDGKVLAVKKIDSSVFQGRTEEFSSVVAVISKLHHTNITEVVGFCSEQGQHMLVYEYFMNGSLYEFLHMSDDFSKPLTWNTRVKIALGTAKALQYLHEVCSPSIIHMNIKSSNILLDTELNPHLSDYGLAAFYKLRSGRPGGGYDAPECTQGSSYTMKSDIYSLGVVMLELLTGRMPYDSGKAKVEQCLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSA | 653 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9019149 | 9025121 | - | CmaCh15G014270.1 | Cma15g01427 | 310577 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma15g01427 | 653 | Gene3D | Ribonuclease Inhibitor | 25 | 248 | IPR032675 | - | |
Cma15g01427 | 653 | Pfam | Leucine rich repeat N-terminal domain | 26 | 66 | IPR013210 | - | |
Cma15g01427 | 653 | Gene3D | Phosphorylase Kinase; domain 1 | 345 | 454 | - | - | |
Cma15g01427 | 653 | MobiDBLite | consensus disorder prediction | 279 | 352 | - | - | |
Cma15g01427 | 653 | ProSiteProfiles | Protein kinase domain profile. | 378 | 648 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma15g01427 | 653 | MobiDBLite | consensus disorder prediction | 281 | 318 | - | - | |
Cma15g01427 | 653 | Pfam | Protein kinase domain | 380 | 643 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma15g01427 | 653 | SUPERFAMILY | Protein kinase-like (PK-like) | 356 | 645 | IPR011009 | - | |
Cma15g01427 | 653 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 | 19 | 652 | - | - | |
Cma15g01427 | 653 | SUPERFAMILY | L domain-like | 25 | 211 | - | - | |
Cma15g01427 | 653 | PANTHER | OS01G0253100 PROTEIN | 19 | 652 | IPR045271 | GO:0004714|GO:0006468 | |
Cma15g01427 | 653 | Gene3D | Transferase(Phosphotransferase) domain 1 | 455 | 651 | - | - | |
Cma15g01427 | 653 | MobiDBLite | consensus disorder prediction | 210 | 247 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma14g01226 | Cma-Chr14:9734658 | Cma15g01427 | Cma-Chr15:9019149 | 0 | dispersed | |
Cma15g01427 | Cma-Chr15:9019149 | Cma17g00644 | Cma-Chr17:5444729 | 0 | dispersed | |
Cma15g01427 | Cma-Chr15:9019149 | Cma04g00965 | Cma-Chr4:4949158 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69171 | PF00069 | Pkinase | 6.10E-41 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma15g01427 | - | - | cmax:111468899 | 1205.28 |