Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g01427 ATGAACCTCAATGTTTTTGTGTTCTGGATCATACAGATCTCCATCCATGCCGTTTCAGTTGTTTCTGAAACCAAGGCGTCCGACGTTTCTGCATTGAATGTGATGTTTAGCAGTTTAAATTCACCTTCACAACTCTCTCGTTGGAAGTCAAGTGGGGGAGACCCATGTGGGGATTCTTGGGAAGGGATCAAATGCTCAGGATCATCCATCACTGAAATAACTTTATCAAACTTTGAACTGAGTGGAACATTAGGCTACCAGCTTGCAAATTTGGCTTCTGTCACCTCCTTTGATTTGAGCAATAACAACCTGAATGGCGATATCCCTTATCAGCTTCCCCCTAATGCAGTTTCCATCGATCTTTCCACGAACAGCTTCACCGGTAGCGTGCCATATTCAATATCTCAGATGTCTAATCTTCAAGTTTTAAATCTTGGGCATAATCAGCTGAGCAACCAATTGAGTGACATGTTTGGCAACGTTTCTAAACTCAACAGGATGCATATACAAAATAATGGATTTACAGGTTCCATTAATGTTCTTGCTGATCTTCCACTCAAAGATTTGAGAGTCACAAATAACAAGTTCACTGGATGGATTCCTGATAGCCTTCAGGACATAGATAATTTGGAAACTGGAGGCAATTCATGGTCATCTGGACCAGCTCCTCCTCCACCACCAGGAGATAGGGCAAAGAAAAACAAGAACAAAAACGGGTCAAGCAACTCATCCCCAAAAGTAAGTGGAATGGCCATAGCAGGAATTGTGATGGGAGTATTAGCAGTAATCGCCATAATCATAGCATTGTTCTCAAGAAGGTCACCTCCTTCCCACTTTCTTGATGAAGATACAAACCAACACAGCGGCTCCTTGACTCCACGCACACCCCATCAACCGTCCAAAGACTTGCACAATAACACTAATAATAATAATGCCATTGAAAGAAAATCATGCAACTCAGATGTCTCTGTTGACATAAAGCCTCTTAGTGGGCTTAGGCCTCCTCCACCCTTTGATCCTGTTAAGCCCTCCGGTGATGCTCAGCTTGCAAGCCGCCTCAGTTCCAGGAGGAGCACTTCCGTGCGTGTCATTTCCTACTCATTGGCTGATTTGCAGACTGCTACTGCTAACTTTGCTACTGGTCGCCTTCTTGGTGAGGGCTCAATTGGACGTGTTTACAAGGCCAAGTATGGAGATGGGAAGGTGTTAGCAGTGAAGAAGATTGATTCATCAGTTTTTCAAGGAAGAACAGAGGAGTTTTCTTCAGTAGTTGCTGTCATTTCAAAGCTTCATCACACAAACATTACAGAAGTTGTTGGGTTCTGTTCAGAGCAGGGACAGCACATGCTGGTTTATGAATATTTCATGAATGGCTCACTTTATGAGTTTCTTCATATGTCAGATGACTTCAGTAAGCCACTCACATGGAACACTAGAGTCAAAATTGCTTTGGGGACTGCAAAAGCTCTTCAGTACCTTCACGAGGTTTGCTCGCCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTGCTCGACACGGAACTCAATCCCCATCTCTCGGACTACGGTTTAGCAGCATTTTACAAGCTAAGAAGTGGAAGGCCTGGAGGTGGATATGATGCACCAGAATGCACACAGGGTTCAAGTTACACAATGAAGAGTGACATTTACAGTTTGGGAGTGGTGATGTTGGAGCTGTTGACCGGGCGGATGCCTTATGACTCTGGGAAGGCAAAGGTGGAGCAATGTCTAGTCCGATGGGCAACCCCACAGCTGCATGACATAGATGCACTGGACAAAATGGTAGATCCTGCATTGCGTGGGCTATATCCGCCAAAGTCCGTGTCTAGATTTGCCGATATCATCGCCCTTTGCGTGCAATCGGAGCCTGAATTTCGGCCTCCCATGTCGGAGGTGGTGCAGGCCTTGGTGACTTTGGTTCAACGATCAGCATGA 1962 44.8 MNLNVFVFWIIQISIHAVSVVSETKASDVSALNVMFSSLNSPSQLSRWKSSGGDPCGDSWEGIKCSGSSITEITLSNFELSGTLGYQLANLASVTSFDLSNNNLNGDIPYQLPPNAVSIDLSTNSFTGSVPYSISQMSNLQVLNLGHNQLSNQLSDMFGNVSKLNRMHIQNNGFTGSINVLADLPLKDLRVTNNKFTGWIPDSLQDIDNLETGGNSWSSGPAPPPPPGDRAKKNKNKNGSSNSSPKVSGMAIAGIVMGVLAVIAIIIALFSRRSPPSHFLDEDTNQHSGSLTPRTPHQPSKDLHNNTNNNNAIERKSCNSDVSVDIKPLSGLRPPPPFDPVKPSGDAQLASRLSSRRSTSVRVISYSLADLQTATANFATGRLLGEGSIGRVYKAKYGDGKVLAVKKIDSSVFQGRTEEFSSVVAVISKLHHTNITEVVGFCSEQGQHMLVYEYFMNGSLYEFLHMSDDFSKPLTWNTRVKIALGTAKALQYLHEVCSPSIIHMNIKSSNILLDTELNPHLSDYGLAAFYKLRSGRPGGGYDAPECTQGSSYTMKSDIYSLGVVMLELLTGRMPYDSGKAKVEQCLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSA 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9019149 9025121 - CmaCh15G014270.1 Cma15g01427 310577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g01427 653 Gene3D Ribonuclease Inhibitor 25 248 IPR032675 -
Cma15g01427 653 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Cma15g01427 653 Gene3D Phosphorylase Kinase; domain 1 345 454 - -
Cma15g01427 653 MobiDBLite consensus disorder prediction 279 352 - -
Cma15g01427 653 ProSiteProfiles Protein kinase domain profile. 378 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01427 653 MobiDBLite consensus disorder prediction 281 318 - -
Cma15g01427 653 Pfam Protein kinase domain 380 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g01427 653 SUPERFAMILY Protein kinase-like (PK-like) 356 645 IPR011009 -
Cma15g01427 653 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 19 652 - -
Cma15g01427 653 SUPERFAMILY L domain-like 25 211 - -
Cma15g01427 653 PANTHER OS01G0253100 PROTEIN 19 652 IPR045271 GO:0004714|GO:0006468
Cma15g01427 653 Gene3D Transferase(Phosphotransferase) domain 1 455 651 - -
Cma15g01427 653 MobiDBLite consensus disorder prediction 210 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01226 Cma-Chr14:9734658 Cma15g01427 Cma-Chr15:9019149 0 dispersed
Cma15g01427 Cma-Chr15:9019149 Cma17g00644 Cma-Chr17:5444729 0 dispersed
Cma15g01427 Cma-Chr15:9019149 Cma04g00965 Cma-Chr4:4949158 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69171 PF00069 Pkinase 6.10E-41 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g01427 - - cmax:111468899 1205.28