Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00076 ATGGCCATCGCCGTGCTCGATGCCCTCGACAATGCTCGGACACAATGGTACCATATTACCGCCATAGTCATCGCCGGGATGGGCTTCTTCACCGACGCCTATGATCTGTTCTGCATCTCAACCGTGTCGAAGCTTCTCGGTCGACTTTACTACTTCGATCCAGATAGTTCGAAGCCGGGAAAACTTCCGAACGCAGTCAACAATGCTGTCGTCGGAGTTGCACTGGTTGGAACCCTGATGGGGCAACTTTTCTTTGGGTGGTTGGGTGACAAACTTGGGAGGAAGAAAGTCTATGGTGTTACCCTTATTCTTATGGCCTTTTGTGCCATCTGCTCAGGGCTGTCTTTTGGATCAACATCAAAATCAGTGATTGGTACTCTTTGCTTCTTTAGATTTTGGCTTGGATTTGGCATTGGTGGCGACTATCCCCTTTCAGCCACCATCATGTCTGAATATGCCAACAAAAAAACTCGAGGGGCTTTCATTGCAGCCGTCTTCGCCATGCAGGGTGTGGGGCTGATATTCGCAGGGCTTGTCTCGATGATTCTATCAAAAATCTTCGTGTCCCTTCACGATGCTCCTTCATACAAAAGCAACCATGTATTTTCCACACAGCCTCAAGGAGACTTCCTATGGCGGATTGTGTTAATGCTTGGTGCTTTGCCAGCCATCTTAACATACTATTGGCGAATGAAGATGCCTGAGACAGGGCGCTACACCGCCCTTATTGAAGGCAATGCCAAGCAAGCGGCTGCAGACATGGGGAAGGTGTTAGAGATCACAATTCAAGCCGAACAAGATAAGCTTTCCCATTTCAAATCCGCCAATGAATATGGATTGCTGTCTAAGGAGTTCTTTCACCGCCATGGGCTCCATTTGATAGGCACCACCACCACTTGGTTCTTGTTGGACATTGCGTTTTATAGCAATAACCTTACACAAAAGGACATCTTCCCAGCAATGAATTTGACAAGGAAACCAGAAGAAGTTAGCGCATTGGAAGAGGTTTATGAAACATCAAAGGCTATGTTTCTTGTTGCATTACTTGGCACATTCCCTGGATATTGGTTCACTGTGTTCCTGATTGAGAAGCTTGGAAGGTTCAAAATTCAATTGATTGGATTCTTCATGATGTCCATTTTCATGGCGGTCCTTGGCATTCGCTACAATTATTTGAAGAATCATCCCGCCGAGTTCGCCCTCCTTTATGGCTTGACGTTCTTCTTTGCCAACTTTGGTCCCAATAGTACCACCTTTGTCCTCCCGGCCGAGCTCTTCCCAACACGGGTTCGGTCGACGTGCCATGCGCTAAGTGCAGCGTCGGGGAAGGCCGGTGCCATCGTTGGAGCTTTTGGGGTGCAAAACTATACGTTAGATGGTAACCCTAGCAAGATTCAAAAGGCCATGATTTTCTTATCCTTCACCAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACGGAGACTAAAGGTCGATCATTAGAGGAGATCTCCGGCGAGGACGGGGGCGCCAGTGAGCCAGAAACTCAAATGCCAGTGAGATCAATGGGAAAGCCAGGAGCTCAAATGGAAGAAGAAAATTGA 1584 47.54 MAIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSSKPGKLPNAVNNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLIFAGLVSMILSKIFVSLHDAPSYKSNHVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEITIQAEQDKLSHFKSANEYGLLSKEFFHRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTRKPEEVSALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSIFMAVLGIRYNYLKNHPAEFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLSFTNMLGFVFTFLVTETKGRSLEEISGEDGGASEPETQMPVRSMGKPGAQMEEEN 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 329719 331519 + CmaCh16G000760.1 Cma16g00076 310674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00076 527 Gene3D MFS general substrate transporter like domains 17 513 IPR036259 -
Cma16g00076 527 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 508 - -
Cma16g00076 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857
Cma16g00076 527 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 3 508 - -
Cma16g00076 527 Pfam Sugar (and other) transporter 22 498 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cma16g00076 527 TIGRFAM 2A0109: phosphate:H+ symporter 6 500 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cma16g00076 527 MobiDBLite consensus disorder prediction 495 527 - -
Cma16g00076 527 CDD MFS_PhT 22 490 - -
Cma16g00076 527 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma16g00076 Cma-Chr16:329719 Cma17g00166 Cma-Chr17:859051 0 dispersed
Cma16g00076 Cma-Chr16:329719 Cma06g01328 Cma-Chr6:8742265 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00076 K08176 - csv:101210631 950.273