Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00169 ATGGAGAGGAGCCTCGGGGAGTCGCAATTTGAGCAAATGAAGGCAGCTTTCAAGGGTAAAATATTGCCTGCTGTACACCCAGTAAGTGTTAAGAGGTATGCATCAGAGGCTGTGATTGGAGCCCCTGAAGGGAGTGGCAATGAGACATTGATGGCGCTTAGGGACTCTGGGGCTGGGAAGATGGAAGGTAAATGGTACCGTGAAGACGAGATTCTTGATGACAAATGGGTCGAACGCAGTAGAAAGAAGGGTCAGAAACAGGGGTCCCAAGCAGATAGCTCGCATTTGGATGGATTGAAATGGGAGGTTTTGGTGGTGAATGAGGCAGTTGTTAATGCATTTTGCTTGCCTGGTGGGAAGATCGTTGTTTTCACGGGCTTGCTCGAGCACTTCAGAAATGATGTAGAAATCGCAACAATTATTGGTCATGAGGTTGGGCATGCTGTGGCTCGACATGCTGCAGAGGGTATCACAAAGAATCTCTGGTTTGCCGTTTTGCAACTTATCCTTTATCAATTCGTGATGCCTGATATTGTGAACACTATGTCAACGCTTTTCTTGAGGCTTCCTTTCTCTAGAAGCGGATTACATTGGTCTGCTGGATACGACCCGAGGGTTGCACCCACTGTGTATGAGAGGTTGGGTAAGGTGACTGGGGATTCCGCGCTGAGGGACTATCAATCTACTCATCCATCGGGAAAGAAGAGAGCTCAGTTGCTAGCTGAAGCTAAGGTTTGCCGTTATCGGGGGGGTCCAGTAGTAAAGGCGATCGGAAGAGTGTTGAAGCTCAATGAAAAGGACGTGGAAGCGGCATTGATGACTCTGCATAGATTTGGGAACCACTCGTCTTCTTCGTTGTGGGTTCCATTTGATGATGTACAAACAACCTTCATCTTCACAACCACCACGGGCGGCGGCGGCCCACCACCAGTCACGGAGGAGCTAAGCCTCCCGTGCCTAATACATATCGAAGCTCCCCCATTCCCTCTTCATTTCTCTCGCAAACAGGAGAGCACACTCCTTTCCTCTGCTTCCCAAATGGCTCATACTCCTCTGAAATGGCTGTGTTTGCTGCTGGTTTTTGACTGTTCGCTTCTTTCAAGCGCTCAGTTTCTGAAAACTTATGTTGTTCAAATGGATAGGTCTGCAATGCCGGACTCATTTTCGGATCATCTTCAGTGGTACTCCACAGTGCTTACCAGTGTGGTCGTTAATCCTGAGAGAGAAGGCAATGGGGGAGGTGAACAGAGGATCATTTACAGTTACCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCAGAGCGGCTCGAGGAAGAAGATGGGGTCTTGGCCATTTTTCCAGAGACAAAGTACGATCTTCACACCACCAGAAGCCCCAGATTTCTTGGGCTTGAACCAGCTGACAGCAACAGCGCCTGGTCTCAGCAAATTGCAGACCATGACGTCATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGATGCCGGGATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGCGAAACAGGGCGAGACTTCACGAAACAGAATTGTAACAGAAAGATCGTTGGAGCTAGAATGTTCTACCATGGGTATGAAGCTGCAACTGGGAAATTTAACGAAAAGTTGGAGTATAAATCTCCAAGGGATCAAGATGGGCATGGAACTCACACGGCAGCCACCGTCGCCGGCTCTCCGACAGCCAGCGCGAACCTCCTCGGTTATGCGTATGGGACGGCCAGAGGAATGGCGCCCGGTGCTAGAATAGCGGCTTACAAAGTCTGTTGGGCCGGCGGCTGCTTTAGCTCCGACATTTTGTCGGCTGTCGACAGAGCTGTGGCCGATGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGCCTCTCCGTTGCAGCATTTGGGGCAATGGAGATGGGCGTGTTTGTGTCCTGTTCGGCCGGAAATGCAGGGCCGGACCCTGTCAGTCTCACAAACGTATCGCCATGGATAACCACTGTCGGCGCCAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCAATGGCAGAACAGTCACCGGCGTTTCACTTTACAAAGGAAGAATCACAATTCCAGAAAACAAACAATTCCCAGTTGTATACATGGGGAGTAACTCGAGCAACCCGGATCCGAGCTCGCTATGTTTAGAAGGAACATTAGATCCCCATTTCGTGGCCGGAAAAATCGTGATATGCGATCGTGGAATTAGCCCACGGGTCCAGAAGGGTGTGGTGGTGAAGAATGCAGGTGGGGTTGGGATGATTCTGGCGAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGATTGCCATTTGGTACCTGCCGTCGCCGTCGGTGAAAGAGAAGGTAAAGCAATTAAGGTGTACGCATTGACGAATCGAAAAGCGACGGCGAGTTTAGGATTTTTAGGGACAAAATTGGGGGTAAGACCGTCGCCGGTGGTGGCGGCGTTTTCATCCAGAGGACCAAATTTCCTCACACTTGAGATCCTCAAGCCCGATCTGGTGGCCCCTGGCGTTAACATCCTCGCCGCTTGGACAGGAAAAACAGGGCCGTCGAGTTTGACGACGGATACAAGAAGGGTTAAATTCAACATTCTGTCAGGAACCTCAATGTCTTGCCCACACGTCAGTGGCGTAGCAGCTCTGATCAAATCAAAGCATCCCGATTGGAGCCCGTCGGCAATCAAATCGGCACTGATGACCACCGCTTACGTCCACGACAACACCTATAAGCCTCTCAAAGACTCCTCCGGCACATCGCCGTCGAGTCCGTACGACCACGGTGCCGGCCACATAAACCCAAGAAAAGCCCTAGATCCTGGCTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGAATTCCTCTGTACGCAGGATTTAACCCCTTCACAGCTCAAAGTATTCTCCAAATATTCAAACAGATCTTGTCATCACCTTCTCCCCAACCCTGGAGACTTAAATTATCCAGCCATCTCTGCCGTTTTCCCTGAAAAAGCCTCCGTCACTTCCTTGACCCTTCACAGAACCGTCACCAACGTCGGCCCTGCAACCTCCAGTTACCATGCCGTGGCGACTCCGTTCAACGGCGCCGCCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACAAGGAGATATCAGAAGCTTTCATACAAAATCACTTTCCTGACGAAGAAGAGACAGAGTATGCCGGAATTTGGAGGGCTAATCTGGAAGGACGGAACTCATAGTGTGAGAAGTCCGATTGTGATCACTTGGTTGTCGTTTGTTTGA 3357 50.55 MERSLGESQFEQMKAAFKGKILPAVHPVSVKRYASEAVIGAPEGSGNETLMALRDSGAGKMEGKWYREDEILDDKWVERSRKKGQKQGSQADSSHLDGLKWEVLVVNEAVVNAFCLPGGKIVVFTGLLEHFRNDVEIATIIGHEVGHAVARHAAEGITKNLWFAVLQLILYQFVMPDIVNTMSTLFLRLPFSRSGLHWSAGYDPRVAPTVYERLGKVTGDSALRDYQSTHPSGKKRAQLLAEAKVCRYRGGPVVKAIGRVLKLNEKDVEAALMTLHRFGNHSSSSLWVPFDDVQTTFIFTTTTGGGGPPPVTEELSLPCLIHIEAPPFPLHFSRKQESTLLSSASQMAHTPLKWLCLLLVFDCSLLSSAQFLKTYVVQMDRSAMPDSFSDHLQWYSTVLTSVVVNPEREGNGGGEQRIIYSYQNVFHGVAARLSEEEAERLEEEDGVLAIFPETKYDLHTTRSPRFLGLEPADSNSAWSQQIADHDVIVGVLDTGIWPESESFNDAGMSPVPAHWKGECETGRDFTKQNCNRKIVGARMFYHGYEAATGKFNEKLEYKSPRDQDGHGTHTAATVAGSPTASANLLGYAYGTARGMAPGARIAAYKVCWAGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYKGRITIPENKQFPVVYMGSNSSNPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILANTAANGEELVADCHLVPAVAVGEREGKAIKVYALTNRKATASLGFLGTKLGVRPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSGTSPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFEFLCTQDLTPSQLKVFSKYSNRSCHHLLPNPGDLNYPAISAVFPEKASVTSLTLHRTVTNVGPATSSYHAVATPFNGAAVKVEPESLNFTRRYQKLSYKITFLTKKRQSMPEFGGLIWKDGTHSVRSPIVITWLSFV 1118
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 739332 744524 - CmaCh16G001690.1 Cma16g00169 310767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00169 1118 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 362 1113 - -
Cma16g00169 1118 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 363 459 IPR037045 -
Cma16g00169 1118 ProSiteProfiles Serine proteases, subtilase domain profile. 455 967 - -
Cma16g00169 1118 Gene3D Peptidase S8/S53 domain 486 980 IPR036852 GO:0004252|GO:0006508
Cma16g00169 1118 Pfam Peptidase inhibitor I9 374 459 IPR010259 -
Cma16g00169 1118 ProSitePatterns Serine proteases, subtilase family, serine active site. 897 907 IPR023828 -
Cma16g00169 1118 Pfam PA domain 726 814 IPR003137 -
Cma16g00169 1118 Pfam Peptidase family M48 90 175 IPR001915 GO:0004222|GO:0006508
Cma16g00169 1118 MobiDBLite consensus disorder prediction 941 961 - -
Cma16g00169 1118 CDD M48C_Oma1_like 87 243 - -
Cma16g00169 1118 Pfam Fibronectin type-III domain 1014 1112 IPR041469 -
Cma16g00169 1118 Pfam Subtilase family 485 938 IPR000209 GO:0006508|GO:0008236
Cma16g00169 1118 CDD PA_subtilisin_like 699 828 - -
Cma16g00169 1118 Gene3D - 191 307 IPR016039 GO:0016746
Cma16g00169 1118 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 362 1113 IPR045051 -
Cma16g00169 1118 SUPERFAMILY Subtilisin-like 458 971 IPR036852 GO:0004252|GO:0006508
Cma16g00169 1118 PRINTS Subtilisin serine protease family (S8) signature 896 912 IPR015500 -
Cma16g00169 1118 PRINTS Subtilisin serine protease family (S8) signature 484 503 IPR015500 -
Cma16g00169 1118 PRINTS Subtilisin serine protease family (S8) signature 562 575 IPR015500 -
Cma16g00169 1118 SUPERFAMILY Thiolase-like 252 299 IPR016039 GO:0016746
Cma16g00169 1118 Gene3D Metalloproteases ("zincins"), catalytic domain 88 156 - -
Cma16g00169 1118 Gene3D - 984 1115 - -
Cma16g00169 1118 MobiDBLite consensus disorder prediction 941 955 - -
Cma16g00169 1118 CDD Peptidases_S8_3 456 933 IPR034197 -
Cma16g00169 1118 Gene3D - 692 836 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma16g00169 Cma18g01198 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00769 Cma-Chr10:3535963 Cma16g00169 Cma-Chr16:739332 0 dispersed
Cma11g00735 Cma-Chr11:3596817 Cma16g00169 Cma-Chr16:739332 0 dispersed
Cma12g00589 Cma-Chr12:3069290 Cma16g00169 Cma-Chr16:739332 0 dispersed
Cma16g00169 Cma-Chr16:739332 Cma20g00757 Cma-Chr20:3568839 0 dispersed
Cma16g00169 Cma-Chr16:739332 Cma18g01198 Cma-Chr18:9511233 3.08E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00169 - - csv:101214825 1420.22