Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00222 ATGTGGGAACCCCACCAAATCCACCCCCCTTCGGGGCCCAATGTCCTTAGTGGCACACTGCCTCGTGTCGACCCCCATTCGGGGAATAGCCTCCTCGCTGGCACATCACCCAACGTCTGGTTGAGGGCTGGAAACGTTATTTTCAACTATAGGTACTACAACAATAGATTGCAGAAAACTAAAGTAACTGAACATTTTTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACATGATCTCTTCAACTTTGGATTTTGGGTAACTGAGGAGTATCAAGCTGTAAATGTTTCCACGAAGACTGATGTTTGGAGGTCTGAGATCATCGCAGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCTGCTCAAGGCCTCTCAGAAGCAAAAAGGTTAAGAGGGCAGTTCAAAGTGCAAGGCACACCCATCCTTTTGTTGTAGAGCCTACATTATCGAACAAGGCGGATGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGTTTTTTAAGTACCACTCTACATTCATCCAATGATCCTGACTGCGTACAATCAATATCAGGGCACCATATTGCGCCAATTATGCTTCAATTTGCCAAGACAAGAAAATTGTCGATTGAACGTGCAGACCCAAGACACTGTACCCTCTTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCAATGGCATTGGAACAAGTGTTATCAGATCGAGATAGCGAAGATGAAGTCGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGATTTTGTCGGTGTAACCAAGGACGAGAAGCAAATTAGGCATATGTGGAACTCGTTCGTTAGGAAGCAACGGGTGCTGGCAGATGGCCATATCCCCTGGGCTTGTGAGGCATTTTCACAGTTACATGGACCAAACCTTGTCAAAACTCCATCTCTACTATGGTTACCGTGTATGGAGATGTTATCGGACTACCTTTTTTTCCAGTCCTCTTTCTTGAGGAGAATGTTGCGAATTGCACTATGA 1059 44.66 MWEPHQIHPPSGPNVLSGTLPRVDPHSGNSLLAGTSPNVWLRAGNVIFNYRYYNNRLQKTKVTEHFSCPFCLVKCASFKGLRCHLLSLHDLFNFGFWVTEEYQAVNVSTKTDVWRSEIIADGIDPKQQTFFFCSRPLRSKKVKRAVQSARHTHPFVVEPTLSNKADDAQSSKGEKAQISGFLSTTLHSSNDPDCVQSISGHHIAPIMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVGVTKDEKQIRHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPSLLWLPCMEMLSDYLFFQSSFLRRMLRIAL 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1005804 1012826 - CmaCh16G002220.1 Cma16g00222 310820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00222 352 PANTHER POLYCOMB GROUP PROTEIN 36 332 - -
Cma16g00222 352 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 36 332 - -
Cma16g00222 352 Pfam VEFS-Box of polycomb protein 216 333 IPR019135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00805 Cma-Chr6:4246880 Cma16g00222 Cma-Chr16:1005804 3.05E-101 transposed
Cma16g00222 Cma-Chr16:1005804 Cma04g00366 Cma-Chr4:1815858 5.61E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00222 - - cmo:103494459 519.235