Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00223 ATGCCTGGCATACCTCTTGTGGCTCGTGAAACTTCTTTCTCTCCCAGCTGTTCCAGAAACGCAGATCAAATGTGTCGTGTAGACTCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTACTGCAAGCCAGTTGAACTCTACAACATTCTTCAGCGGCGTGCTATTAAAAATCCTTTATTTCTTCACAGATGTTTAAGGTACAAAATAGAGACGAAACACAAGAGAAGGATCCAGATGGCAATTTCAATCTCTAGGACAACGAGCGCAGGTGGTCAGACACAGAATTTGTTTCCTATGCATGTCATCTTGGGAAGATTAGTCTCTGACATTTCAGTTGCCGAGTTCTCTGGTGTATATCGCTTCAGTCACGCTTGCCTCTTAAATGGCATCAACAGAGTGGAATGCAATTCTCAAGTTATAGCTAATTTCATCCTCCCTGAAATTAACAAGCTAGCTGCAGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTTAGCTGTGTTGGATTTGCAAATACTTCGTCCGGAGTAGATTCAGTTGATGGGCGTTCATACATGGCATCTGTTCCTGGTACCTTATCCTCCATCGAGCTGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACTGTGGATATGCGCTCCTGTGTTGTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTGTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCCAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTCGGTGCTAGGGGCAAATCTCCATATGATTCATACACGTTCAGTGAAATACCTTCCTCGTCACTATATCATATGA 879 42.66 MPGIPLVARETSFSPSCSRNADQMCRVDSRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIKNPLFLHRCLRYKIETKHKRRIQMAISISRTTSAGGQTQNLFPMHVILGRLVSDISVAEFSGVYRFSHACLLNGINRVECNSQVIANFILPEINKLAAEAKSGSLAILFVSCVGFANTSSGVDSVDGRSYMASVPGTLSSIELWQNSSNFGLGQRAEIMSTVDMRSCVVKTSCLDGEKCVGFQIPYNSDSMHTASKYRSQFLQKSSVLGANLHMIHTRSVKYLPRHYII 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1013170 1022747 - CmaCh16G002230.1 Cma16g00223 310821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00223 292 PANTHER BNAA02G11340D PROTEIN 15 264 - -
Cma16g00223 292 PANTHER POLYCOMB GROUP PROTEIN 15 264 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g00366 Cma16g00223 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00805 Cma-Chr6:4246880 Cma16g00223 Cma-Chr16:1013170 7.47E-12 dispersed
Cma16g00223 Cma-Chr16:1013170 Cma04g00366 Cma-Chr4:1815858 6.83E-140 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00223 - - csv:101213607 421.394