Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00265 ATGGAGAGTTTTGCCCTCCAATCTGTCTCCACCACCGCTTCCTTGCCCCGCCATTCTCCCATTGCTCGAATTTCTCTCCTCCACCGCCGGAAAACCATTCCCCATTCCCAGTCCTTTCCCACTTCCCCTTGTTTATATCGCTCGGTTTCGCTATTTCAATCAGCCCCACCGATCCCTCAATCCCTCCTTTTCATTTCCCGATCTTCTTCCCTTTTCAATCCGCTTTTCAATCCCAAATTGCGCCGAACCCATCAATTACGAACCAGTGCCTCTCAATCACCGGAGAAGCAGCCACTGCCGCCGACCCCACTTCCCCAACAAGGTGCTAAACCAATCCCTTTTCTGATTTCCATCGCAATTGGTTTAATTGTTCGTTTTGCCGTCCCGAAACCGGTGGAGGTTTCTGCCCAAGCGTGGCAGTTGCTCTCGATTTTCTTGTCCACGATTGCTGGACTCGTTTTGAGTCCCTTGCCGGTGGGTGCTTGGGCGTTTCTTGGCCTCACTATGACTGTTGTTACTAAGACTTTGACGTTTACTTCTGCTTTTAATGCTTTCACTAGTGAGGTGATTTGGTTGATTGTTATTTCATTCTTTTTCGCTCGTGGGTTTGTCAAAACTGGGTTGGGGGATCGAATTGCGACGTATTTTGTTAAATGGATGGGGAAGAGTACGCTTGGTTTGTCTTACGGTTTGACGTTCAGTGAGGCTTTGATTGCCCCTGCTATGCCCAGCACTACGGCCAGGGCTGGCGGTGTGTTCTTGCCCATTATCAAGTCCTTGTCGCTTGCTGCTGATAGTAAACCCAACGACCCATCGTCTAAAAAGATCGGTGCTTATCTAATTCAGTCTCAGTTTCAGAGTGCTGGTAACTCTAGTGCCCTTTTCCTAACTGCTGCTGCTCAAAACTTATTGTGCCTTAAACTGGCTGAAGAACTTGGTGTGCAAATATCTAGCCCCTGGCTTACTTGGGCCAAAATTGCTAGTGTGCCAGCCATCATTTGTCTCTTAACAACTCCAGCAATCTTATACAAGCTGTTTCCTCCCGAAACCAAGAACACACCCGATGCCCCAGCCATGGCGACGAAAAAGTTGGAGGCTATGGGTCCTGTCACCAAAAATGAATGGGTCATGGTCGGTACCATGCTTATTGCAGTCTCGTTATGGATAGCTGGAGAGGCCCTTCAAATTCCTAGTGTTGTAGCTGCAATGATTGGTTTATCAACACTCCTTACACTCGGAGTCCTAAACTGGGAAGACTGCTTAGCTGAAAAGTCGGCCTGGGACACGTTGGCTTGGTTTGCTGTCCTCGTGGGCATGGCGGGCCAATTGACGAGTCTCGGTCTGGTTGGCTGGATGTCCAATTGTGTGGCCAGTTTGCTGAAGTCTCTCTCTCTCAGCTGGCCTGCAGCTTTTGCTATTCTTCAGCTATCTTACTTCTTTGTTCACTACCTCTTCGCTAGCCAAACCGGTCACGTCGGAGCTTTATACTCGGCATTCCTTGCGATGCACTTGGCGGCCAAGGTGCCTGGGGTATTGGCAGCTCTCGCCTTAGCTTACAACACGAATCTCTTCGGCGCTCTGACTCATTATAGCAGTGGTCAAGCTGCTGTATACTATGGAGCGGGTTATGTCGACCTACCAGACGTATTCAAAATCGGGTTCGTGATGGCGCTCGTAAACGGTATTATCTGGATTGTGGCTGGAGAGAGGAAGAAGAAAGATTTCGCCACTCGAAATCGGTACTTGATTCAGTATAATCCACGGAACCATTTGCCGAATTTCAATTTCTGGGGCTTCGATTTCTGTTCTGGGAAAGAGGCGTAA 1824 48.96 MESFALQSVSTTASLPRHSPIARISLLHRRKTIPHSQSFPTSPCLYRSVSLFQSAPPIPQSLLFISRSSSLFNPLFNPKLRRTHQLRTSASQSPEKQPLPPTPLPQQGAKPIPFLISIAIGLIVRFAVPKPVEVSAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTMTVVTKTLTFTSAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNDPSSKKIGAYLIQSQFQSAGNSSALFLTAAAQNLLCLKLAEELGVQISSPWLTWAKIASVPAIICLLTTPAILYKLFPPETKNTPDAPAMATKKLEAMGPVTKNEWVMVGTMLIAVSLWIAGEALQIPSVVAAMIGLSTLLTLGVLNWEDCLAEKSAWDTLAWFAVLVGMAGQLTSLGLVGWMSNCVASLLKSLSLSWPAAFAILQLSYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKIGFVMALVNGIIWIVAGERKKKDFATRNRYLIQYNPRNHLPNFNFWGFDFCSGKEA 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1245458 1249659 - CmaCh16G002650.1 Cma16g00265 310863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00265 607 Pfam Sodium:sulfate symporter transmembrane region 114 568 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cma16g00265 607 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 130 567 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cma16g00265 607 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 80 569 IPR030676 -
Cma16g00265 607 PANTHER DICARBOXYLIC ACID TRANSPORTER2 80 569 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01248 Cma-Chr2:7335133 Cma16g00265 Cma-Chr16:1245458 1.23E-144 dispersed
Cma16g00265 Cma-Chr16:1245458 Cma20g00081 Cma-Chr20:351263 4.87E-153 dispersed
Cma16g00265 Cma-Chr16:1245458 Cma04g00403 Cma-Chr4:2059268 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00265 - K03319 csv:101213018 941.799