Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00346 ATGGCTTCCCTCTCGATTGGGATTCATTTGCCCCCTTCGCAGCATTGGAAGAGATTTTCATTTCATTCCCACTCTCCCGTTTCACTCCCATTTCACACGAGCTATGGTTCTTCTTTGAGTAGAACCAGAGCTCCAAGGTTGCTTGGTAAGAACCTTCTCGCGCGGGCTGAAGACGAGGATAAAAGCTCTTCTTCGTTTCAGCAGCAGCAAGCTCCACCCAACTTCAGCAAACAATTGGAGGAACTCTCATCGAAGTCAGGAACATGTGATCCTTTATGCTCAGTTGATGAAATAAGCTCTCGGGATTTTGAAGATAGTTATCAGCCACAGGCTGATTTAGTGAAGGCTTTTGCAATACTTGCAGCTGCCCTTACTGGGATTGTGGCTATTAATCACTCCTGGGTTGCTGCTAATCAGGATCTTGCTATGGTGTTGCTATTTAGTATAGGATATGCTGGAATCATTTTTGAAGAAGCTCTTGCTTTCAACAAGAGTGGAGTGGGATTGTTGATGGCGGTTGGCTTGTGGGTTGTTCGAAGTATTGGGGCTCCATCCACCGAAATTGCTGCTTCAGAGCTAACACATGCCACAGCAGAAGTCAGTGAAATTGTGTTCTTCTTGCTTGGGGCAATGACCATAGTCGAGATCGTCGATGCCCATCAAGGATTTAAGTTGGTTACAGACAGTATAACGACTCGAAAACCACGAACTCTTCTCTGGGTGATTGGGATTGTAACCTTTTTTCTAAGTTCAATCCTTGACAACCTGACAACCACAATTATCATGGTTTCGTTATTGCGAAAACTAGTTCCTCCGTCCGAGTATCGCAAGCTACTCGGAGCTGTAATCGTTATAGCAGCTAACGCGGGCGGTGCATGGACACCTATTGGAGATGTAACCACAACCATGTTATGGATACATGGTCAGATATCAACAATGCCAACACTCAAAGACTTGTTTATACCTTCGGCTGTTTCACTTATAGTTCCGTTGTCTCTTCTGTCCCTAACAAGTGAAGTCAATGGAAAGGGACAGGATTTTTCGAACGTTATGGCATCTGAGCAGATGGCTCCTCGAGGAAAGCTCGTCTTCTCTGTAGGTGTCGGAGCGTTGGTCTCTGTTCCAGTGTTCAAGGCCCTCACAGGTTTGCCTCCCTACATGGGTATGCTGCTTGGACTTGGAATTCTGTGGATTCTCACTGATGCAATTCACTATGGTGAATCGGAACGGCAAAAGTTGAAAGTTCCTCAGGCTTTGTCTCGTATCGATACGCAAGGAGCGCTATTTTTCCTCGGTATTCTTTTGTCTGTCAGCAGCTTAGAGGCTGCAGGAATCTTACGCGAGTTAGCAAACTACCTCGACGCTCATATTCCAAATGCTGAACTCATTGCGAGTGCAGTCGGTGTTATATCAGCAATCATAGACAATGTCCCATTAGTTGCAGCAACAATGGGAATGTATGATCTCTCCTCCTTCGCGCAAGATTCCGAGTTCTGGCAGCTGATAGCATTTTGTGCTGGCACTGGTGGATCCATGCTTATAATTGGATCTGCAGCTGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTGAGAAAGGTTAGCGGCTTTGCCTTTGCTGGATATGCTGCTGGAATTGCTGCCTATTTAGCTCTTCATAACCTCAACACATCGCTACCTACAACCATTGCTGAGATGCCTACTATTATGGGATTCATAAACTGA 1737 45.71 MASLSIGIHLPPSQHWKRFSFHSHSPVSLPFHTSYGSSLSRTRAPRLLGKNLLARAEDEDKSSSSFQQQQAPPNFSKQLEELSSKSGTCDPLCSVDEISSRDFEDSYQPQADLVKAFAILAAALTGIVAINHSWVAANQDLAMVLLFSIGYAGIIFEEALAFNKSGVGLLMAVGLWVVRSIGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDSITTRKPRTLLWVIGIVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTMPTLKDLFIPSAVSLIVPLSLLSLTSEVNGKGQDFSNVMASEQMAPRGKLVFSVGVGALVSVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDAHIPNAELIASAVGVISAIIDNVPLVAATMGMYDLSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNTSLPTTIAEMPTIMGFIN 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1622339 1628050 - CmaCh16G003460.1 Cma16g00346 310944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00346 578 Pfam Citrate transporter 152 507 IPR004680 GO:0016021|GO:0055085
Cma16g00346 578 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 575 IPR045016 GO:0006814|GO:0015297
Cma16g00346 578 PANTHER BNAC03G40960D PROTEIN 1 575 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00346 - - csv:101221448 994.186