Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma16g00464 | ATGGCGGACGAAGTGAAACTGCTGGATTTCTGGCCGAGTATGTTCGGGATACGAGTTAGAATAGCCCTGGCCGAGAAGGGCGTAGCGTATGAATACATGGAACAAGATCTGAGGAACAAGAGCCCTTTGCTGTTGCAGATGAACCCAGTTCACAAGAAGATCCCTGTTCTTGTCCATAATGGAAGACCCATTTGTGAATCTTCCATTATCGTTCAGTACATCGATGAAGTTTGGAAGGACAAAGCTCCTCTCCTGCCGTCTGATCCTTATCAGAGGGCTCAGGCCCGATTCTGGGTGGATTTCATCGACAAGAAGGCAGGGATGAAGGAGCTGATTGGAGTTTTGAAGCAGCTGGAAGAGGTTCTTGGGGAGAAGAGTTTCTTCGGAGGGGAGCGTTTGGGGTTTGTAGACATTGCTTTGATTGGATTCCACAGTTGGTTTTATAGCTATGAGGCGTTTGGTAAGTTGAGCATCGAGGCTGAGTGTCCCAAGATAATGGGTTGGGCGAAGAGATGCTTGGAGAAGGAGAGTGTTTCCAAGTCCTTGCCTGACTCCAAGAAGGTCTATGACTTTGTGGTTCAAATGAAGAAAGCACTTGGCCTTGAATGA | 609 | 47.78 | MADEVKLLDFWPSMFGIRVRIALAEKGVAYEYMEQDLRNKSPLLLQMNPVHKKIPVLVHNGRPICESSIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKAGMKELIGVLKQLEEVLGEKSFFGGERLGFVDIALIGFHSWFYSYEAFGKLSIEAECPKIMGWAKRCLEKESVSKSLPDSKKVYDFVVQMKKALGLE | 202 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 2326120 | 2328293 | + | CmaCh16G004640.1 | Cma16g00464 | 311062 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma16g00464 | 202 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 197 | IPR045073 | - | |
Cma16g00464 | 202 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cma16g00464 | 202 | Pfam | Glutathione S-transferase, C-terminal domain | 104 | 175 | IPR004046 | - | |
Cma16g00464 | 202 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Cma16g00464 | 202 | Gene3D | - | 88 | 202 | - | - | |
Cma16g00464 | 202 | SUPERFAMILY | GST C-terminal domain-like | 76 | 197 | IPR036282 | - | |
Cma16g00464 | 202 | SFLD | Main.3: Omega- and Tau-like | 2 | 199 | IPR045073 | - | |
Cma16g00464 | 202 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Cma16g00464 | 202 | SUPERFAMILY | Thioredoxin-like | 5 | 105 | IPR036249 | - | |
Cma16g00464 | 202 | SFLD | Main (cytGST) | 2 | 199 | - | - | |
Cma16g00464 | 202 | PANTHER | S-TRANSFERASE TAU 22, PUTATIVE-RELATED | 4 | 197 | - | - | |
Cma16g00464 | 202 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 63 | 199 | IPR010987 | - | |
Cma16g00464 | 202 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Cma16g00464 | 202 | CDD | GST_C_Tau | 89 | 195 | IPR045074 | GO:0004364|GO:0006749 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00640 | Cma-Chr4:3271577 | Cma16g00464 | Cma-Chr16:2326120 | 7.03E-116 | dispersed | |
Cma16g00464 | Cma-Chr16:2326120 | Cma06g01277 | Cma-Chr6:8499592 | 2.67E-50 | dispersed | |
Cma16g00464 | Cma-Chr16:2326120 | Cma16g00465 | Cma-Chr16:2333498 | 1.25E-135 | tandem | |
Cma04g02270 | Cma-Chr4:15857294 | Cma16g00464 | Cma-Chr16:2326120 | 1.68E-76 | transposed | |
Cma16g00464 | Cma-Chr16:2326120 | Cma04g00638 | Cma-Chr4:3268691 | 6.49E-73 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma16g00464 | K00799 | - | csv:101218562 | 339.732 |