Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00502 ATGATGTTTGGGAGATTTAGGGATATCATCTCGTCTGCAACCACTCGTTTGTCGGGTCGCCAGTCTTCTGCAGATGCGTATAAGTCGTCTTCGTCGCCTGGATCTTCACCTCCCTTGATCGCTTCTTCTTCTCCTATTCTTGCCGGATTTGCTAGTCCTGCGCTTAAGAACAGTCTAAGGCTTTCATCGTCGCTCCAGGATCTCTCTACTTACCGTAGGCTTGATCTCGAAGAGGGAAATCATGGACTTGACAATGCTGCTCCTGATTATAGATCACTCCAACGAGAGAATGCCGCCTCTAGTTTCTCAAAAGAGAAGACATTGCCTGGAGGCTTCTTCTGGTGGTTGAGCAAGAAGTGGGTTCGGACAATTGTTCTTTTTCTGAGTCTATTGCTCTTTTTTGTTCTAATCTATACGGTTTCTATGTATATTTATTCATATTGGTCTCAAGGAACGCCTAGATACTATGTGGTGCTTGACTGTGGAAGTACTGGCACTCGAGCTTATGTATATCAAGCAAGTGTTAATTATAAGAAAAATGGAGCGCTTCCCATTGCCATTAGATCATATACAGGACAAAAGAAGAAATTGAAGTCTCAGAGCGGTCGGGCTTATGATCGAATGGAAACAGAACCTGGTCTTGATAAGTTGGTTCGTAATATAACTGGTTTGAGGAAAGCTATTAAACCTCTGCTTCAGTGGGCTGAGAAGCAGATACCGAAGCGTGCCCATGAAAGCACCTCTCTTTTCCTTTATGCGACTGCTGGAGTTAGAAGACTACCCCCGGCAAATTCGAAATGGCTTCTGGACAATGCCTGGTCTATATTAAAGAGTTCGCGTTTTCTTTGCCAGAGAGAGTGGGTTAAGACCATTTCAGGTACAGAAGAGGCTTACTATGGCTGGATAGCCCTTAACTATCAGAAACAAGTGTTGGGGGCTACACCAAGGGAACCAACATACGGGGCACTCGACTTGGGTGGTTCTTCTTTGCAAGTTACTTTTGAAAGCAAGGAGCAAAACGAGTCTAGTTTGAACATTAAAATTGGAAATGTGGATTATCATCTTAATGCCTATTCTCTTACTGGCTATGGTTTAAATGATGCATTTGGGAAATCTGTCGTCCACCTACTAAGAAGGATCGAAGAACGCGAGAAACTGGACTTGTCTAATGGAAAATTTAAACTTAACCACCCTTGCCTGCATTCTGGGTACAACGAGCAGTATACCTGTAACCAGTGTGGAAAATTATTGGGCAGAGAAGGAAATTCTGGGATTTCTCTAAGACTGATCGGTGCACCGAATTGGGAAGAATGTTCTGCACTTGCTAAAGCTGCTGTGAATTTTTCCGAGTGGTCAAATACAAGTGCTGGAGTTGATTGTGATGTGCAACCTTGTGCTATAAGTAATGACTACCCTTCCCCATATGGAAATTTTTATGCCATTTCCGGTTTCTTTGTGGTATTTCGATTCTTCAATCTGACTTCAGAGGTTACACTTGATGATGTATTAGAAAGGGGTCACAAATTTTGTGAGAAACCTTGGGAAGTTGCTCTGGCTAGTGTTGCTCCACAGCCCTTTATTGATCAATACTGCTTTAGAGCGCCGTACATAGTCTCACTCCTTAGAGAAGGGTTGCATATTACCGATAAACAAATTGTTATCGGTTCTGGGAGTACGACTTGGACACTTGGGGTCTCGCTGCTGGAGGCTGGGAAGGCATTTACAATTACGACAACCAGGCTAGAGCTCCGTGGTTATGAAATTTTTAAACTGAAGATAGATCCTCTAGTTCTTATAGTCATTGTGTTCACATCATTGTTTTTCCTGCTTGCATTATCCTGTGTAGGAAGTGCAATACCTAGATTTTTCCGCAGACAATACCTCCCAATTTTCAGGCATAATGCTGTCTCCACCACGTCTGTTTTAAACATTCCTTCTCCTTTTCGGTTACAGCGGTGGAGTCCAATGAATGCTGGTGATGGCAGAGTCAAGATGCCACTAAGCCCAACAGCTAAAGGTTCTGAAGAAAGACCCTTTGGCTTAGGACATGGCTTTGGCAGCAGCAGTGGCATTCAACTTATGGAGTCGTCATTGCACCGATCGACCAGTAGTGGGGTTTCGCATAGTTACTCTTCAAATAGCCTTGGCCAAATGCAGTTCGACAACAACAGCGTCGGTTCCTTCTGGACCCCACACCGGAGTCAGATGCACCTTCAAAGTAGACGATCGCAATCTCGAGAGGATCTCTCTTCAACGTTGGCTGAAACATACACGGGGAAGGTTTAG 2286 44.05 MMFGRFRDIISSATTRLSGRQSSADAYKSSSSPGSSPPLIASSSPILAGFASPALKNSLRLSSSLQDLSTYRRLDLEEGNHGLDNAAPDYRSLQRENAASSFSKEKTLPGGFFWWLSKKWVRTIVLFLSLLLFFVLIYTVSMYIYSYWSQGTPRYYVVLDCGSTGTRAYVYQASVNYKKNGALPIAIRSYTGQKKKLKSQSGRAYDRMETEPGLDKLVRNITGLRKAIKPLLQWAEKQIPKRAHESTSLFLYATAGVRRLPPANSKWLLDNAWSILKSSRFLCQREWVKTISGTEEAYYGWIALNYQKQVLGATPREPTYGALDLGGSSLQVTFESKEQNESSLNIKIGNVDYHLNAYSLTGYGLNDAFGKSVVHLLRRIEEREKLDLSNGKFKLNHPCLHSGYNEQYTCNQCGKLLGREGNSGISLRLIGAPNWEECSALAKAAVNFSEWSNTSAGVDCDVQPCAISNDYPSPYGNFYAISGFFVVFRFFNLTSEVTLDDVLERGHKFCEKPWEVALASVAPQPFIDQYCFRAPYIVSLLREGLHITDKQIVIGSGSTTWTLGVSLLEAGKAFTITTTRLELRGYEIFKLKIDPLVLIVIVFTSLFFLLALSCVGSAIPRFFRRQYLPIFRHNAVSTTSVLNIPSPFRLQRWSPMNAGDGRVKMPLSPTAKGSEERPFGLGHGFGSSSGIQLMESSLHRSTSSGVSHSYSSNSLGQMQFDNNSVGSFWTPHRSQMHLQSRRSQSREDLSSTLAETYTGKV 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2557729 2561996 - CmaCh16G005020.1 Cma16g00502 311100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00502 761 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 87 719 IPR000407 GO:0016787
Cma16g00502 761 PANTHER APYRASE 7-RELATED 87 719 - -
Cma16g00502 761 Gene3D Exopolyphosphatase. Domain 2 294 555 - -
Cma16g00502 761 Pfam GDA1/CD39 (nucleoside phosphatase) family 153 568 IPR000407 GO:0016787
Cma16g00502 761 MobiDBLite consensus disorder prediction 745 761 - -
Cma16g00502 761 Gene3D - 146 293 - -
Cma16g00502 761 MobiDBLite consensus disorder prediction 733 761 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00875 Cma-Chr13:7124492 Cma16g00502 Cma-Chr16:2557729 4.03E-93 transposed
Cma16g00502 Cma-Chr16:2557729 Cma04g00604 Cma-Chr4:3071830 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00502 - - cmax:111483167 1463.36