Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00505 ATGTTCTGTTTCGCCGCCGTCATCGCCGCCTTCTTTCTTCTTCTTCTTCATTTTCTTTTCAAATTCTCCGCCCCTGCTCGCCGGAAACTTCCCCTTCCGCCGGGCTCAATGGGCTGGCCTTACATGGGTGAAACCCTCCAACTCTACTCTCAAGATCCCAATGTCTTCTTCGCCTCAAAGAAGAAGAGATATGGTCCTATTTTCAAGTCCCACATATTGGGTTATCCTTGTGTGATGGTTTCTAGCCCTGAAGCTGCTAAGTTTGTGTTGGTCACTAAAGCTCACCTCTTTAAGCCTACATTTCCAGCCAGTAAAGAAAGGATGTTAGGCAAAAATGCCATCTTCTTTCACCGAGGTGACTACCATGCTAAATTACGACGCCTCGTTCTTCGAACATTCATGCCCGAAGCGATTCGAAACATCGTCCCGAGTATCGAATCCATTGCTAAGAACACTGTTCAATCATGGGATGGACAATTGATTAATACCTTCCAAGAAATGAAGATGTTTGCATTCGAGGTTTCTTTACTTTCGATATTTGGAAAAGAGGAAGCTCTTTACTTCGAAGACTTGAAGCGGTGCTATTACACACTTGAAAAAGGGTACAATTCAATGCCGATAAACCTGCCAGGAACACTCTTCCACAAGGCCATGAAAGCAAGGAAAGAGCTAGCACATATTTTAACCAAGATCCTCTCAACCAGAAGGGAAATGAAGCGCGATCACAACGATCTCCTTGGATCTTTCATGGGTGAAAAGGAAGGCCTCACCGATGAACAGATCGCCGATAACGTCATCGGTCTAATCTTCGCTGCTCGGGACACGACAGCGAGTGTTCTAACATGGATCTTGAAGTATCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGCTGAACAAGAAGCAATCATGAAGGAAAAACAGAGTGGAGATGATAACCTCACCTGGTCTGACACCAAAAACATGCCGATCACTTCAAGGGTGATTCAAGAAACTCTAAGAGTTGCTTCAGTTCTATCATTTACCTTCAGAGAAGCAGTGGAAGATGTAGAATTTGACGGCTATTTGATTCCAAAAGGATGGAAAGTTCTTCCTCTTTTCAGAAACATTCATCACAGCCCAGAAAATTTCCCTCAACCTGACAAGTTCGATCCTTCAAGATTCGAGGTCCCTCAAAAACCCAATACCTACATGCCATTTGGCAATGGAACCCACTCTTGTCCAGGAAATGAACTGGCCAAGCTCGAAATGCTCGTTCTTCTCCATCATTTAACCACCAAGTACAGATGGAGTGTAGTGGGCGCTCAAGAAGGCATTCAATATGGTCCTTTTGCGCTTCCCCATAATGGGCTTCCCATTAAAATCTCTCTCAAGAAGTAA 1383 44.4 MFCFAAVIAAFFLLLLHFLFKFSAPARRKLPLPPGSMGWPYMGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMVSSPEAAKFVLVTKAHLFKPTFPASKERMLGKNAIFFHRGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKEEALYFEDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAHILTKILSTRREMKRDHNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTAEQEAIMKEKQSGDDNLTWSDTKNMPITSRVIQETLRVASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPENFPQPDKFDPSRFEVPQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWSVVGAQEGIQYGPFALPHNGLPIKISLKK 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2597830 2600656 + CmaCh16G005050.1 Cma16g00505 311103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00505 460 PANTHER CYTOCHROME P450 26 8 457 - -
Cma16g00505 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
Cma16g00505 460 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS E-class P450 group I signature 367 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 SUPERFAMILY Cytochrome P450 27 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PANTHER ABSCISIC ACID 8'-HYDROXYLASE CYP707A2 8 457 - -
Cma16g00505 460 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 Pfam Cytochrome P450 33 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00505 460 Gene3D Cytochrome P450 23 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01001 Cma-Chr1:7251686 Cma16g00505 Cma-Chr16:2597830 1.65E-96 dispersed
Cma01g01840 Cma-Chr1:12161356 Cma16g00505 Cma-Chr16:2597830 7.80E-168 dispersed
Cma05g00186 Cma-Chr5:803874 Cma16g00505 Cma-Chr16:2597830 2.66E-173 dispersed
Cma11g01752 Cma-Chr11:11648636 Cma16g00505 Cma-Chr16:2597830 0 dispersed
Cma12g00452 Cma-Chr12:2380444 Cma16g00505 Cma-Chr16:2597830 1.24E-69 dispersed
Cma16g00505 Cma-Chr16:2597830 Cma19g00605 Cma-Chr19:6623302 2.90E-152 dispersed
Cma19g01066 Cma-Chr19:8953994 Cma16g00505 Cma-Chr16:2597830 1.92E-76 dispersed
Cma01g00618 Cma-Chr1:3222113 Cma16g00505 Cma-Chr16:2597830 0 transposed
Cma16g00505 Cma-Chr16:2597830 Cma04g00601 Cma-Chr4:3033551 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00505 K09843 - csv:101212508 852.818