Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00512 ATGGATTGGGCATTCGTCCGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCAGCTTCGGCCAGCCATTGAAAGCTGCCCTGTTGATCAATTATGATCCAACTGGACCTTCCCGTTTGCTTTCGACCATTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAATTGAATCAGTTTATCGATTTCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATCGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAAGGCGTTGTAATAGTGCAAACAACAGCCTTTATTTTGGTTGCTATGTATGATGGTTCGATTGCAGCAGCATCTCGCGCTATGGCGTCTGCCGATCTGTTATCTTGGCAGTTAGGCAGGAAAAATCTTTAG 444 43.92 MDWAFVRKAWDKWASGSIGSFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADLLSWQLGRKNL 147
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
16 2632384 2634969 - CmaCh16G005120.1 Cma16g00512 311110
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00512 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Cma16g00512 147 Pfam Profilin 43 131 IPR005455 GO:0003779
Cma16g00512 147 Gene3D Dynein light chain 2a, cytoplasmic 9 140 - -
Cma16g00512 147 SUPERFAMILY Profilin (actin-binding protein) 10 132 IPR036140 -
Cma16g00512 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma16g00512 Cma-Chr16:2632384 Cma04g00596 Cma-Chr4:3003989 1.06E-09 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00512 - - csv:105435190 278.485