Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00519 ATGGCCGGCCAGTCGCGGAAGTGGCTGGTTCTGGTGGCGACGATATGGATTCAAGCATTCACCGGCACGAACTTCGATTTCTCGGCCTATTCTTCGAGATTGAAATCGGTATTAGGCATTTCTCAGGTTCAACTTAATTACCTCGCCACCGCCTCCGATATAGGCAAGGTTTTCGGCTGGTCCTCTGGATTAGCTCTGCTTCACCTACCGTTGCCGGTGGTTCTGTTCATCGCCGCTTTCTTAGGACTAATCGGTTACGGCTTCCAATGGCTCCTAATCGCCGATTTCATCTCCTTGCCCTATTTCCTGGTGTTCTTCCTGTGTTTGCTTGCGGGTTGCAGCATCTGTTGGTTCAACACTGTCTGTTTCGTCCTTTGCATTCGGAACTTCTCTGCTAATCGGCCTTTGGCATTATCTCTCACCGTCAGCTTCAATGGCGTCAGTGCAGCTTTCTACACGCTCGCCGGCAACGCCATTAATCCCTCTTCGCCTCCCATTTACCTCCTTCTCAACGCCCTCATTCCCCTTCTCACTTCCATTGCCGCTTTCCTCCCCGTCCTCCATCAACCGCCGCTGCAATCGCTTTCTCTCTCCTCTGACGCTGTTCAGCGAGACTCTCTCATTTTTCTCATCTTGAATTTCCTTGCCGTCGCCGTTGGAATCTACCTTCTCCTCTTCGGCTCTGTCACTTCCGCCGATCCGATGATGGCGAGGCTTCTCTTCATCGGAGCCATCGTCCTTCTCGTGTTGCCTCTCTGTATTCCCGGCGTTGTTTACGCTAACGATTGGTTCCACCGGACCGTTAACTCGAGCTTCAGCCTCGACGGATCTAGCTTCATTCTTGTCCACGACGAAGATCTTGAGTTTCATAAGGAGCTGCTTAGTCGTGAAGCAAATGGAAGCTTTGGCAATGGCGGATCTCAGTTATTGTCTGAATCTGCTTCGCTTATTGACGGTGAGATTGAATCGAAAAGCTGTTTTCCGAAATTGATTGAAAAGGATCAATTGGCGATGCTTGGTGAAGAGCATCCGTCGAGCCGATTGGTGAAACGACTGGATTTTTGGCTGTATTTCACCGCTTACATCTGCGGTGGCACAATTGGACTTGTTTACAGTAACAATATAGGACAGATTGCGCAATCGCTAGGGTTGAGTTCAAGAACCAACGCCATCGTAACACTCTACTCCTCCTTCTCCTTCTTCGGCCGATTGCTCTCGGCCGTACCGGACTACATTCGAGCGAAATTATATTTTGCAAGAACAGGATGGCTTTCGATCGCTCTAATTCCAACTCCTATTGCTTTCTTTCTGCTATCGGCGTCGTCGAGCATGGTGACGGTGTACATAGGCACGGCACTGATCGGTCTGAGCTCCGGCTTCATATTCGCGGCGGCAGTTTCCATTACGGCGGAGCTGTTCGGGCCAAATAGCTTAGGCGTTAACCACAACATTCTGATCACAAACATTCCAATCGGATCTCTTCTGTACGGCATGTTTGCAGCGGTGGTATACGATTCGCAGGGAAGGAACTCCGGGCATGGTGAGGCGGTTGTGTGCATGGGAAGAAGGTGCTATTTCTTGACTTTTGTATTTTGTGGATGCATTTCTGTTGTAGGCTTGGTTTCTAGCGTGTTACTGTTCTTGAGAACCAGACACGCTTATGATCACTTCGAAAGTAGTAGGATTTCCAGTAGTTCAAGTAGATTGTATTAA 1713 49.45 MAGQSRKWLVLVATIWIQAFTGTNFDFSAYSSRLKSVLGISQVQLNYLATASDIGKVFGWSSGLALLHLPLPVVLFIAAFLGLIGYGFQWLLIADFISLPYFLVFFLCLLAGCSICWFNTVCFVLCIRNFSANRPLALSLTVSFNGVSAAFYTLAGNAINPSSPPIYLLLNALIPLLTSIAAFLPVLHQPPLQSLSLSSDAVQRDSLIFLILNFLAVAVGIYLLLFGSVTSADPMMARLLFIGAIVLLVLPLCIPGVVYANDWFHRTVNSSFSLDGSSFILVHDEDLEFHKELLSREANGSFGNGGSQLLSESASLIDGEIESKSCFPKLIEKDQLAMLGEEHPSSRLVKRLDFWLYFTAYICGGTIGLVYSNNIGQIAQSLGLSSRTNAIVTLYSSFSFFGRLLSAVPDYIRAKLYFARTGWLSIALIPTPIAFFLLSASSSMVTVYIGTALIGLSSGFIFAAAVSITAELFGPNSLGVNHNILITNIPIGSLLYGMFAAVVYDSQGRNSGHGEAVVCMGRRCYFLTFVFCGCISVVGLVSSVLLFLRTRHAYDHFESSRISSSSSRLY 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2656463 2659727 + CmaCh16G005190.1 Cma16g00519 311117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00519 570 Pfam Nodulin-like 7 255 IPR010658 -
Cma16g00519 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 565 - -
Cma16g00519 570 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 565 - -
Cma16g00519 570 Gene3D MFS general substrate transporter like domains 347 558 IPR036259 -
Cma16g00519 570 SUPERFAMILY MFS general substrate transporter 340 552 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00983 Cma-Chr8:6150201 Cma16g00519 Cma-Chr16:2656463 0 dispersed
Cma16g00519 Cma-Chr16:2656463 Cma02g00243 Cma-Chr2:1081025 4.47E-86 dispersed
Cma16g00519 Cma-Chr16:2656463 Cma13g00022 Cma-Chr13:250198 5.57E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00519 - - csv:101211287 970.689