Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00734 ATGGCTGCCAATTTCGCCATGTTTAAACCTTATTCCTCATTTTCGACCCCATCATTTGTTCAGACCAAATTTCGTACGCATAGATTATTATGCACTGGCCCATCTTCCTCTTATTATCCACGATGTCAAGGAGGAGCTTATGGTTTACGCGTCGTTAAATGTGCTTCTTCTAATGGTAAGGAGCCTGATTCGTTGGATGATGGAGTTAAAAGTGTGGAGCAGTTACTTAAAGAGAAACAGCGGGCAGAATTGTCTGCTCGGATCGCCTCTGGAGAATTCACAGTGGAAAAAGCTGGTTTTCCATCTGTGTTGAGGAGTGGGTTGTCGAAGATGGGTGTTCCTAGTGATATTCTGGATTTACTATTTGGTTTCATCAATGCTCAAGAACAATATCCCAAGATCCCTGAAGCTAAAGGATCATTAGATGCAGTTCGTAGTGAGGCCTTCTTCATACCTCTGTATGAGCTTTATCTCACGTATGGTGGGATCTTTAGATTGAGTTTTGGGCCAAAGTCGTTCTTGATTGTTTCTGATCCTTCCATTGCTAAACATATACTGAAGAATAATCCAAAGAATTATTCTAAGGGTATCTTAGCTGAAATTCTTGACTTTGTCATGGGGAAGGGACTTATACCAGCTGATGGAGAGATATGGCGTGTACGAAGACGGGCTATAGTCCCATCTTTGCATATGAAGTATGTAGGAGCTATGATTAATGTTTTTGGAGAAGCTGCAGATAGGCTTTGCAATAAGCTAGATGATGCAGCATCTAATGGTGTAGATGTGGAAATGGAGTCCCTCTTCTCCCGTCTGACTTTAGATATCATTGGCAAAGCAGTTTTTAACTATGACTTCGATTCACTTACAAACGACACTGGCATAGTTGAGGCTGTTTACACTGTTCTAAGAGAAGCAGAAGATCGCAGCGTTGCACCAATTCCGGTATGGGAAATTCCAATTTGGAAGGATATTTCTCCACGGCAAAAAAAGGTCTCTAAAGCCCTTAAATTGATCAATGAAACCCTCGATCAACTAATTGCTATATGCAAGAGGATGGTTGATGAAGAAGAGCTGCAGTTTCATGAAGAATACATGAACGAGCAAGATCCTAGCATACTTCATTTCCTCTTGGCATCGGGAGACGATGTTTCAAGCAAGCAGCTTCGTGATGACTTGATGACTATGCTCATAGCTGGGCATGAAACAACTGCTGCAGTTTTAACATGGACCTTTTATCTTCTTTCCAAGGAGCCTAGGATCATGGCCAAGCTCCAAGAGGAGGTTGATTCGGTCCTCGGGGATCGGTTTCCAACTATCGAAGATATGAAGAACCTCAAATATGCCACACGAATAATTAACGAATCCTTGAGGCTTTACCCACAGCCACCAGTTTTAATACGTCGATCTCTTGACAACGATATGCTCGGAAAGTACCCAATAAAGAAGGGTGAAGACATATTCATATCTGTTTGGAACTTACATCGCAGTACAGAACTTTGGGATGATGCAGATAAATTTAATCCTGAAAGGTGGCCTTTGGATGGACCCAATCCTAATGAGACCAATCAAAATTTCAGGTATTTGCCGTTCGGTGGTGGACCACGGAAATGTGTGGGAGACATGTTTGCTTTGTACGAGGCTGTTGTAGCACTTGCCATGCTTGTTCGGCGATTTGACTTCCAAATGGCACTTGGAGCACCTCCTGTAAAAATGACAACTGGAGCTACGATTCATACGACAGATGGATTGAAAATGACGGTTACACGAAGAATGAAACCTCCAATCATACCCACATTAGAGAAGATGCCTGCAATGGTCGGTGATTCATCGGTCGGTTTCTTGAAAGATGAAACAGAAATTGCTCAAGAAGGAGAAGTTTCTTCTGCTCATTCTTGA 1896 42.35 MAANFAMFKPYSSFSTPSFVQTKFRTHRLLCTGPSSSYYPRCQGGAYGLRVVKCASSNGKEPDSLDDGVKSVEQLLKEKQRAELSARIASGEFTVEKAGFPSVLRSGLSKMGVPSDILDLLFGFINAQEQYPKIPEAKGSLDAVRSEAFFIPLYELYLTYGGIFRLSFGPKSFLIVSDPSIAKHILKNNPKNYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPSLHMKYVGAMINVFGEAADRLCNKLDDAASNGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRQKKVSKALKLINETLDQLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETTAAVLTWTFYLLSKEPRIMAKLQEEVDSVLGDRFPTIEDMKNLKYATRIINESLRLYPQPPVLIRRSLDNDMLGKYPIKKGEDIFISVWNLHRSTELWDDADKFNPERWPLDGPNPNETNQNFRYLPFGGGPRKCVGDMFALYEAVVALAMLVRRFDFQMALGAPPVKMTTGATIHTTDGLKMTVTRRMKPPIIPTLEKMPAMVGDSSVGFLKDETEIAQEGEVSSAHS 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3867166 3872982 + CmaCh16G007340.1 Cma16g00734 311332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00734 631 PRINTS P450 superfamily signature 398 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS P450 superfamily signature 528 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS P450 superfamily signature 537 548 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS E-class P450 group I signature 157 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS E-class P450 group I signature 387 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS E-class P450 group I signature 407 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS E-class P450 group I signature 449 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS E-class P450 group I signature 489 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS E-class P450 group I signature 527 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PRINTS E-class P450 group I signature 537 560 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PANTHER CYTOCHROME P450 FAMILY 4 88 594 - -
Cma16g00734 631 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 530 539 IPR017972 GO:0005506|GO:0016705
Cma16g00734 631 Gene3D Cytochrome P450 132 596 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 PANTHER - 88 594 - -
Cma16g00734 631 Pfam Cytochrome P450 154 574 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 SUPERFAMILY Cytochrome P450 146 590 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma16g00734 631 Coils Coil 72 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01189 Cma-Chr3:7937824 Cma16g00734 Cma-Chr16:3867166 3.63E-09 dispersed
Cma04g00608 Cma-Chr4:3093283 Cma16g00734 Cma-Chr16:3867166 8.97E-149 dispersed
Cma16g00734 Cma-Chr16:3867166 Cma10g00756 Cma-Chr10:3444531 3.09E-48 dispersed
Cma16g00734 Cma-Chr16:3867166 Cma07g00885 Cma-Chr7:4177829 1.63E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00734 K15747 - csv:101215492 1114.37