Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00808 ATGGCCGCCACCGCCACCGCCACCGGCCTCCTCCGGGCCACCCCCTTTCTGGGCCAGACCAGATCCTCCCCACAGAACCCCCTCAGAGATGTCGTCGCCATGGGAACTCCCAAATACACCATGGGAAATGATCTGTGGTATGGGCCAGACAGAGTCAAGTACTTGGGACCCTTTTCAGCTCAGACTCCCTCCTACTTGAACGGTGAGTTCCCCGGCGATTATGGATGGGACACTGCCGGCTTGTCCGCCGATCCCGAGGCCTTTGCCAAGAACAGAGCTCTCGAGGTGATCCACGGGAGGTGGGCCATGCTGGGAGCCTTCGGTTGCATAACACCGGAAGTCCTAGAAAAATGGCTGAAAGTGGACTTCAAGGAGCCGGTATGGTTCAAGGCCGGCGCCCAAATCTTCTCAGAAGGGGGGCTGGATTACTTGGGGAACCCAAACCTGGTCCACGCGCAGAGCATCCTGGCCGTGTTGGGCTTCCAAGTGGTCCTGATGGGACTGGTTGAAGGGTTCCGCATCAATGGCCTGGACGGCGTGGGTGAGGGCAACGACCTCTACCCAGGGGGTCAGTACTTCGACCCGCTCGGACTGGCAGACGACCCCGTCACTTTCGCGGAGCTGAAGGTGAAGGAGATCAAGAATGGGCGCCTCGCCATGTTCTCCATGTTCGGGTTCTTCGTCCAGGCCATCGTCACTGGAAAGGGCCCCCTCGAGAACCTGCTGGACCATCTGGATAACCCTGTGGCCAACAATGCTTGGGTTTATGCCACCAAGTTTGCCCCTGGCTCATAA 795 59.12 MAATATATGLLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4464485 4465835 - CmaCh16G008080.1 Cma16g00808 311406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00808 264 Pfam Chlorophyll A-B binding protein 63 230 IPR022796 -
Cma16g00808 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 4 264 - -
Cma16g00808 264 Gene3D Chlorophyll a/b binding protein domain 53 257 - -
Cma16g00808 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 264 IPR001344 GO:0009765|GO:0016020
Cma16g00808 264 SUPERFAMILY Chlorophyll a-b binding protein 45 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma16g00808 Cma-Chr16:4464485 Cma11g01288 Cma-Chr11:8614659 1.72E-123 dispersed
Cma16g00808 Cma-Chr16:4464485 Cma04g00918 Cma-Chr4:4748020 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00808 K08914 - csv:101207278 520.776