Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00976 ATGCAGCCATACATCGTATACCTCGGATCGCACTCTCACGGATTGAGTCCTTCCTCGTTGGATCTCCAACTTGTAACAAAATCCCATTATGATTTACTGGGATCGGTGTTGGGAAGCAAAGAGATAGCCAAGGAAGCTATTTTATACTCATACAACAGATACATCAATGGCTTTGCCGCAATGCTCAATGAAAAACAAGCAACAGATCTTGCAAGAATTCCAAACGTGATTTCTGTTTTTGAAAGTAAGGAAAGACAATTGCACACAACAAGATCATGGGATTTTCTTGGACTAGAAACACAAGAAGCAGTTCCTTCAGACTCTATTTGGAATGTCACGAGGTTTGGTGAAGATGCAATTATAGCTAACATTGACACAGGTGTTTGGCCAGAATCTAGGAGCTTCAGTGATGAAGGATATGGACCTATCCCTTCAAGGTGGCTGGGCAGTTGTCAAAGTGGCGCTGACCCCAACTTCCATTGCAACAGGAAGCTAATTGGAGCAAGATCCTTTAACTTAGCCAATGGTCCACTCAATGGCAGCTTCAATTCTCCAAGGGACCATCAAGGCCACGGAACCCACACTCTATCCACAGCTGGGGGCAACTTTGTCTCTGGAGCTAATGTTTTTGGCTACGCAAATGGAACTTCCAAAGGTGGCTCACCTCGAGCCCGTGTCGCGTCCTACAAGGTCTGTTGGGAAGCAGAAGGTGGAGGGTGTTTTGACGTGGATATCTTAGCTGCCTTCGAAGCTGCCATTGGTGATGGGGTTGACGTTATCTCAGCTTCTCTTGGTGCAATTCCCTCAGACTTCCTAGACGATGGGCTATCTATAGGGGCCTTTCATGCAGTTCAGCATGGCATCGTTGTTGTTTGTTCGGCTGGGAACTCAGGACCAGCTCCTAGAACTGTATCAAACGTGTCGCCATGGATGTTAACCGTTGGAGCTGGTACCATTGATAGGGAGTTCACAAATTTCGTAGTCCTTGGGAACAAGAAGAAACTCAAGGGTGCAAGCCTTTCTTCTAAGGCATTGAAAGTTGACAAGTTCTACCCTTTAATCAATGCTGTGGATGCAAAAGCAAACAATGTCTCCGAACTTGATGCGGAAATTTGTGAGGAGGGAACACTTGATTCCTCCAAATTGAATGGGAAGATTGTGGTTTGCCTTGTTGGTGTTAATGCAAGAGTGGCCAAAGGTTATGTGGCTGCTCAGGCAGGGGCTATTGGGATGATCTTGGTTAACGATGAAGAAAGTGGGAATGAGATTAAAGCTGATCCACACATCATTCCAGCATCCCATGTAACCTATAATGACAGTATAACCATCTCCCAATATATTAGCTCTACAAGGACACCCATGGCTTACATCAGTTCGGTAACGGCAAAGCTCGGTGTCACGCCAGCCCCAACCATCGCTAGGTTCTCAGGAAGAGGCCCAAGTATAATCGAGGAGTCAATCCTCAAGCCAGATATAACAGCACCAGGTGTAAATATAATTGCGGCTTACCCCGATGGAATACCATTGGCAAATCTACCTGTTGACGATCGTCGAGTTCCTTTTATGGTATACTCTGGCACATCCATGTCTTGCCCCCATGTTTCTGGCATTGTAGGCCTTCTCAAAACCCTAAATCCCAAATGGAGTCCAGCAGCCATTAAATCAGCAATTATGACCACAGCCAAAACAAGAGACAGCACCTTACATCCAATTGTCGACCTCGACGGAGTGATAGCAACTCCATTAGCATACGGCGCCGGACATGTTCATCCAAACAGCGCCATGGACCCTGGCCTCGTTTACGACATTACAATCGACGAATACCTAAATTTCTTGTGCGCTCGAGGCTACAATGCAACGCAAATCAAACAATTCTCAAACAATACATTCGTTTGCAATAGATCATTCAAAGTGACTGACCTTAATTATCCATCCATCTCAGTCGCGGATTTGAAAACAGGCCCTGTGACGATCAATCGAAAGGTGAAGAACGTGGGAAGTCCAGGGAAGTATGTTGCTCGAGTAACGTCGCCCTTGGAAGCTTCAATCGTGGTTGAGCCGAGTACATTGCAATTTACCGCCATGGATGAAGAGAAGAGCTTCAGGGTTGTGTTGCAGAGAAGTGGAAAGGGAAATCAACAGGGTTATGTGTTCGGAACATTGGAATGGTCAGATGGGAAACACAGTGTTGGAAGCCCCATTGCTATCAATTTGGGGAAATAG 2223 45.93 MQPYIVYLGSHSHGLSPSSLDLQLVTKSHYDLLGSVLGSKEIAKEAILYSYNRYINGFAAMLNEKQATDLARIPNVISVFESKERQLHTTRSWDFLGLETQEAVPSDSIWNVTRFGEDAIIANIDTGVWPESRSFSDEGYGPIPSRWLGSCQSGADPNFHCNRKLIGARSFNLANGPLNGSFNSPRDHQGHGTHTLSTAGGNFVSGANVFGYANGTSKGGSPRARVASYKVCWEAEGGGCFDVDILAAFEAAIGDGVDVISASLGAIPSDFLDDGLSIGAFHAVQHGIVVVCSAGNSGPAPRTVSNVSPWMLTVGAGTIDREFTNFVVLGNKKKLKGASLSSKALKVDKFYPLINAVDAKANNVSELDAEICEEGTLDSSKLNGKIVVCLVGVNARVAKGYVAAQAGAIGMILVNDEESGNEIKADPHIIPASHVTYNDSITISQYISSTRTPMAYISSVTAKLGVTPAPTIARFSGRGPSIIEESILKPDITAPGVNIIAAYPDGIPLANLPVDDRRVPFMVYSGTSMSCPHVSGIVGLLKTLNPKWSPAAIKSAIMTTAKTRDSTLHPIVDLDGVIATPLAYGAGHVHPNSAMDPGLVYDITIDEYLNFLCARGYNATQIKQFSNNTFVCNRSFKVTDLNYPSISVADLKTGPVTINRKVKNVGSPGKYVARVTSPLEASIVVEPSTLQFTAMDEEKSFRVVLQRSGKGNQQGYVFGTLEWSDGKHSVGSPIAINLGK 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7523164 7526275 - CmaCh16G009760.1 Cma16g00976 311574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00976 740 CDD Peptidases_S8_3 86 561 IPR034197 -
Cma16g00976 740 Pfam Fibronectin type-III domain 640 736 IPR041469 -
Cma16g00976 740 Pfam Peptidase inhibitor I9 4 88 IPR010259 -
Cma16g00976 740 ProSiteProfiles Serine proteases, subtilase domain profile. 92 595 - -
Cma16g00976 740 PRINTS Subtilisin serine protease family (S8) signature 116 135 IPR015500 -
Cma16g00976 740 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Cma16g00976 740 PRINTS Subtilisin serine protease family (S8) signature 187 200 IPR015500 -
Cma16g00976 740 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 3 739 - -
Cma16g00976 740 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Cma16g00976 740 CDD PA_subtilisin_like 327 457 - -
Cma16g00976 740 SUPERFAMILY Subtilisin-like 87 599 IPR036852 GO:0004252|GO:0006508
Cma16g00976 740 SUPERFAMILY PA domain 379 442 IPR046450 -
Cma16g00976 740 Gene3D Peptidase S8/S53 domain 118 608 IPR036852 GO:0004252|GO:0006508
Cma16g00976 740 Gene3D - 320 464 - -
Cma16g00976 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 739 IPR045051 -
Cma16g00976 740 Pfam PA domain 370 439 IPR003137 -
Cma16g00976 740 Pfam Subtilase family 117 585 IPR000209 GO:0006508|GO:0008236
Cma16g00976 740 Gene3D - 612 738 - -
Cma16g00976 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 88 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00693 Cma-Chr6:3478009 Cma16g00976 Cma-Chr16:7523164 0 dispersed
Cma06g00694 Cma-Chr6:3494530 Cma16g00976 Cma-Chr16:7523164 0 dispersed
Cma16g00976 Cma-Chr16:7523164 Cma16g00989 Cma-Chr16:7617953 0 dispersed
Cma16g00976 Cma-Chr16:7523164 Cma16g00980 Cma-Chr16:7560508 0 proximal
Cma05g00465 Cma-Chr5:2147552 Cma16g00976 Cma-Chr16:7523164 8.60E-178 transposed
Cma13g00330 Cma-Chr13:3831915 Cma16g00976 Cma-Chr16:7523164 0 wgd
Cma16g00976 Cma-Chr16:7523164 Cma06g00688 Cma-Chr6:3437968 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00976 - - cmo:103491006 983.015