Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma16g00976 | ATGCAGCCATACATCGTATACCTCGGATCGCACTCTCACGGATTGAGTCCTTCCTCGTTGGATCTCCAACTTGTAACAAAATCCCATTATGATTTACTGGGATCGGTGTTGGGAAGCAAAGAGATAGCCAAGGAAGCTATTTTATACTCATACAACAGATACATCAATGGCTTTGCCGCAATGCTCAATGAAAAACAAGCAACAGATCTTGCAAGAATTCCAAACGTGATTTCTGTTTTTGAAAGTAAGGAAAGACAATTGCACACAACAAGATCATGGGATTTTCTTGGACTAGAAACACAAGAAGCAGTTCCTTCAGACTCTATTTGGAATGTCACGAGGTTTGGTGAAGATGCAATTATAGCTAACATTGACACAGGTGTTTGGCCAGAATCTAGGAGCTTCAGTGATGAAGGATATGGACCTATCCCTTCAAGGTGGCTGGGCAGTTGTCAAAGTGGCGCTGACCCCAACTTCCATTGCAACAGGAAGCTAATTGGAGCAAGATCCTTTAACTTAGCCAATGGTCCACTCAATGGCAGCTTCAATTCTCCAAGGGACCATCAAGGCCACGGAACCCACACTCTATCCACAGCTGGGGGCAACTTTGTCTCTGGAGCTAATGTTTTTGGCTACGCAAATGGAACTTCCAAAGGTGGCTCACCTCGAGCCCGTGTCGCGTCCTACAAGGTCTGTTGGGAAGCAGAAGGTGGAGGGTGTTTTGACGTGGATATCTTAGCTGCCTTCGAAGCTGCCATTGGTGATGGGGTTGACGTTATCTCAGCTTCTCTTGGTGCAATTCCCTCAGACTTCCTAGACGATGGGCTATCTATAGGGGCCTTTCATGCAGTTCAGCATGGCATCGTTGTTGTTTGTTCGGCTGGGAACTCAGGACCAGCTCCTAGAACTGTATCAAACGTGTCGCCATGGATGTTAACCGTTGGAGCTGGTACCATTGATAGGGAGTTCACAAATTTCGTAGTCCTTGGGAACAAGAAGAAACTCAAGGGTGCAAGCCTTTCTTCTAAGGCATTGAAAGTTGACAAGTTCTACCCTTTAATCAATGCTGTGGATGCAAAAGCAAACAATGTCTCCGAACTTGATGCGGAAATTTGTGAGGAGGGAACACTTGATTCCTCCAAATTGAATGGGAAGATTGTGGTTTGCCTTGTTGGTGTTAATGCAAGAGTGGCCAAAGGTTATGTGGCTGCTCAGGCAGGGGCTATTGGGATGATCTTGGTTAACGATGAAGAAAGTGGGAATGAGATTAAAGCTGATCCACACATCATTCCAGCATCCCATGTAACCTATAATGACAGTATAACCATCTCCCAATATATTAGCTCTACAAGGACACCCATGGCTTACATCAGTTCGGTAACGGCAAAGCTCGGTGTCACGCCAGCCCCAACCATCGCTAGGTTCTCAGGAAGAGGCCCAAGTATAATCGAGGAGTCAATCCTCAAGCCAGATATAACAGCACCAGGTGTAAATATAATTGCGGCTTACCCCGATGGAATACCATTGGCAAATCTACCTGTTGACGATCGTCGAGTTCCTTTTATGGTATACTCTGGCACATCCATGTCTTGCCCCCATGTTTCTGGCATTGTAGGCCTTCTCAAAACCCTAAATCCCAAATGGAGTCCAGCAGCCATTAAATCAGCAATTATGACCACAGCCAAAACAAGAGACAGCACCTTACATCCAATTGTCGACCTCGACGGAGTGATAGCAACTCCATTAGCATACGGCGCCGGACATGTTCATCCAAACAGCGCCATGGACCCTGGCCTCGTTTACGACATTACAATCGACGAATACCTAAATTTCTTGTGCGCTCGAGGCTACAATGCAACGCAAATCAAACAATTCTCAAACAATACATTCGTTTGCAATAGATCATTCAAAGTGACTGACCTTAATTATCCATCCATCTCAGTCGCGGATTTGAAAACAGGCCCTGTGACGATCAATCGAAAGGTGAAGAACGTGGGAAGTCCAGGGAAGTATGTTGCTCGAGTAACGTCGCCCTTGGAAGCTTCAATCGTGGTTGAGCCGAGTACATTGCAATTTACCGCCATGGATGAAGAGAAGAGCTTCAGGGTTGTGTTGCAGAGAAGTGGAAAGGGAAATCAACAGGGTTATGTGTTCGGAACATTGGAATGGTCAGATGGGAAACACAGTGTTGGAAGCCCCATTGCTATCAATTTGGGGAAATAG | 2223 | 45.93 | MQPYIVYLGSHSHGLSPSSLDLQLVTKSHYDLLGSVLGSKEIAKEAILYSYNRYINGFAAMLNEKQATDLARIPNVISVFESKERQLHTTRSWDFLGLETQEAVPSDSIWNVTRFGEDAIIANIDTGVWPESRSFSDEGYGPIPSRWLGSCQSGADPNFHCNRKLIGARSFNLANGPLNGSFNSPRDHQGHGTHTLSTAGGNFVSGANVFGYANGTSKGGSPRARVASYKVCWEAEGGGCFDVDILAAFEAAIGDGVDVISASLGAIPSDFLDDGLSIGAFHAVQHGIVVVCSAGNSGPAPRTVSNVSPWMLTVGAGTIDREFTNFVVLGNKKKLKGASLSSKALKVDKFYPLINAVDAKANNVSELDAEICEEGTLDSSKLNGKIVVCLVGVNARVAKGYVAAQAGAIGMILVNDEESGNEIKADPHIIPASHVTYNDSITISQYISSTRTPMAYISSVTAKLGVTPAPTIARFSGRGPSIIEESILKPDITAPGVNIIAAYPDGIPLANLPVDDRRVPFMVYSGTSMSCPHVSGIVGLLKTLNPKWSPAAIKSAIMTTAKTRDSTLHPIVDLDGVIATPLAYGAGHVHPNSAMDPGLVYDITIDEYLNFLCARGYNATQIKQFSNNTFVCNRSFKVTDLNYPSISVADLKTGPVTINRKVKNVGSPGKYVARVTSPLEASIVVEPSTLQFTAMDEEKSFRVVLQRSGKGNQQGYVFGTLEWSDGKHSVGSPIAINLGK | 740 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 7523164 | 7526275 | - | CmaCh16G009760.1 | Cma16g00976 | 311574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma16g00976 | 740 | CDD | Peptidases_S8_3 | 86 | 561 | IPR034197 | - | |
Cma16g00976 | 740 | Pfam | Fibronectin type-III domain | 640 | 736 | IPR041469 | - | |
Cma16g00976 | 740 | Pfam | Peptidase inhibitor I9 | 4 | 88 | IPR010259 | - | |
Cma16g00976 | 740 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 92 | 595 | - | - | |
Cma16g00976 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 116 | 135 | IPR015500 | - | |
Cma16g00976 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 525 | 541 | IPR015500 | - | |
Cma16g00976 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 187 | 200 | IPR015500 | - | |
Cma16g00976 | 740 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 3 | 739 | - | - | |
Cma16g00976 | 740 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 526 | 536 | IPR023828 | - | |
Cma16g00976 | 740 | CDD | PA_subtilisin_like | 327 | 457 | - | - | |
Cma16g00976 | 740 | SUPERFAMILY | Subtilisin-like | 87 | 599 | IPR036852 | GO:0004252|GO:0006508 | |
Cma16g00976 | 740 | SUPERFAMILY | PA domain | 379 | 442 | IPR046450 | - | |
Cma16g00976 | 740 | Gene3D | Peptidase S8/S53 domain | 118 | 608 | IPR036852 | GO:0004252|GO:0006508 | |
Cma16g00976 | 740 | Gene3D | - | 320 | 464 | - | - | |
Cma16g00976 | 740 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 3 | 739 | IPR045051 | - | |
Cma16g00976 | 740 | Pfam | PA domain | 370 | 439 | IPR003137 | - | |
Cma16g00976 | 740 | Pfam | Subtilase family | 117 | 585 | IPR000209 | GO:0006508|GO:0008236 | |
Cma16g00976 | 740 | Gene3D | - | 612 | 738 | - | - | |
Cma16g00976 | 740 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 88 | IPR037045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g00693 | Cma-Chr6:3478009 | Cma16g00976 | Cma-Chr16:7523164 | 0 | dispersed | |
Cma06g00694 | Cma-Chr6:3494530 | Cma16g00976 | Cma-Chr16:7523164 | 0 | dispersed | |
Cma16g00976 | Cma-Chr16:7523164 | Cma16g00989 | Cma-Chr16:7617953 | 0 | dispersed | |
Cma16g00976 | Cma-Chr16:7523164 | Cma16g00980 | Cma-Chr16:7560508 | 0 | proximal | |
Cma05g00465 | Cma-Chr5:2147552 | Cma16g00976 | Cma-Chr16:7523164 | 8.60E-178 | transposed | |
Cma13g00330 | Cma-Chr13:3831915 | Cma16g00976 | Cma-Chr16:7523164 | 0 | wgd | |
Cma16g00976 | Cma-Chr16:7523164 | Cma06g00688 | Cma-Chr6:3437968 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma16g00976 | - | - | cmo:103491006 | 983.015 |