Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma16g00980 | ATGAAACAGCAAGGGACCATATTGGGCATGGAACACACCCCTTATCTACAGTTGGAGGCAATTTCGTTCAAGGAGTACGCATTTTGGAATGGTTATGGCACTACAAAAGGGGTTCCCCTAAAGCCCATGTTGCCGCCTGTAGACAATGAAGCAGCTAAAGAAGCTATCTTTTACTCATACAATAGACATATCAATGGTTTTGCAGCGGTTCTTGATTACAAAGTTGCAGAAGATGTAGCAAAACATCCAAGTGTGGTATCAGTACATGAAAACAAAGGAAGAGAACTGCATACAACAAATTCATGGAGTTTTCTTGGAGTTGAGAATAATGGTGGACTTCCTCCCAACTCTCTTTGGAATCTTGCAAATTTTGGTGAATCTACAATCATTGGCAACCTTGACACAGGCATTTGGCCCGAATCAAAGAGCTTCAATGATGAAGGATATGGACCTATACCAAAAAGATGGAAGGGAAGCTGTGAAGGTGGCTCCAACTTTAATTGCAACAGGTATTTCAACAAAGGGTATGCATCCATCGTCGGGCCTCTCAACTCAAGCTACTTAACAGCAAGGGACGATCAAGGGCATGGAACACACACTTTATCCACGGCTGGAGGCCATTTTGTTTCAAGAGCAAACATATTTGGGAATGGTAATGGTACTGCAAAAGGGGGCTCCCCTAAAGCCCTTGTCGCCGCCTATAAAGTATGTTGGCCTCGTGTGAACATTGGTGGGTGCTTTGACTCTGACATTCTGGCTGGCTTCGAAGCTGCCATTAGCGATGGAGTTGACGTTCTGTCTATTTCACTCGGTGGAAGTCCTTTAGAATTTCATGATGATCCAATAGCTATAGCATCCTTCCATGCAGTGAAGAACGGCATCACTGTCGTTTGTTCTGCTGGAAACTCAGGACCGTCTCCAGGCACTGTTGCAAATGTCGCACCATGGTTGATAACCGTGGGAGCTAGCACAATTGACAGGCTTTTTACCACTTACTTGGCGCTCGGAGACAAGAGACACATTAAGGGTGAAAGTATTTCTAATAAAATATTGCCAGTGCAGAAGTTTTATCCATTAATACGTGCTTTAGATGCAAAAAACAACAATGTCTCTAATATCGAAGCTATATTATGTCTTGAAGGGTCTCTTGATCCTAAAAAGGTAGAAGGTAAAATTGTGGTTTGCCTTAGTGGGGACATTGCAAATGTGGACAAAGGTTATGTGGCTGCTCAAGCAGGTGCTGTCGGGATGATTCTTACTAATGACAAGGAAGATGGGGATAGACTTGAGGTTGAGGCACACTTACTTCCTACTTCCCATATAAACTACATTGACGCTTACATGACTCACGTGAGGACAGAATTAGGAGTCAAACCAGCACCAATTATGGCTAGATTTTCTTCGAGAGGCCCCAATATAATTGAGCCCTCAATACTCAAGCCTGATATAACTGCACCAGGTGTGAATATATTAGCAGCTTTTACGGAAGAAACGTCACCAACTGGTTCGTCTTTTGATAAACGGCGGGTTCCATTTAATATATTATCTGGCACTTCTATGTCATGCCCTCATATTTCTGGTATCGTTGGCCTTCTCAAAACCCTTTATCCAAAATGGAGTCCAGCGGTTATGAAATCTACAATCATGACTACAGCTAGAATCAAAGCCAATGACTTAAATTCAATACTAAGCTCAGGAAAGGAGAAAGCAAACTCATTTGCATATGGTGCAGGGCATGTCAATCCAAACAAAGCAGCAAATCCAGGCCTTGTTTACGACCTCTCCACCGAAGACTATTTGAACTTCTTATGTGCTCGAGGCTACAACAAAACACAAATGAAGCTATTTTCCAATGATACTTCATTTGTTTGTTCAAAGAAATTCAAAGTAGCAGATTTGAACTACCCATCAATCACAATAGATAATCTGGCATCAGAAGTAGTAAAGATCAAAAGAAGAGTGAAGAATGTGGGAAGTCCAGCCACGTATGTTGCTAACGTCAAGGCACCACCAAGAGTTTCGGTTTCAGTAGAGCCAAATACTTTGAAGTTCACTAGAACCGGTGAAGAGAAGAGCTTCACAGTTGTGTTGAAGAGGGTTCCAAATGATTATCATCGAGGGTCTGTGTTTGGGAGACTTGCATGGTCTAATGGGAAGCACCATGTTAGGAGTCCGATTTTGGTGGTATTAGGATGA | 2196 | 42.49 | MKQQGTILGMEHTPYLQLEAISFKEYAFWNGYGTTKGVPLKPMLPPVDNEAAKEAIFYSYNRHINGFAAVLDYKVAEDVAKHPSVVSVHENKGRELHTTNSWSFLGVENNGGLPPNSLWNLANFGESTIIGNLDTGIWPESKSFNDEGYGPIPKRWKGSCEGGSNFNCNRYFNKGYASIVGPLNSSYLTARDDQGHGTHTLSTAGGHFVSRANIFGNGNGTAKGGSPKALVAAYKVCWPRVNIGGCFDSDILAGFEAAISDGVDVLSISLGGSPLEFHDDPIAIASFHAVKNGITVVCSAGNSGPSPGTVANVAPWLITVGASTIDRLFTTYLALGDKRHIKGESISNKILPVQKFYPLIRALDAKNNNVSNIEAILCLEGSLDPKKVEGKIVVCLSGDIANVDKGYVAAQAGAVGMILTNDKEDGDRLEVEAHLLPTSHINYIDAYMTHVRTELGVKPAPIMARFSSRGPNIIEPSILKPDITAPGVNILAAFTEETSPTGSSFDKRRVPFNILSGTSMSCPHISGIVGLLKTLYPKWSPAVMKSTIMTTARIKANDLNSILSSGKEKANSFAYGAGHVNPNKAANPGLVYDLSTEDYLNFLCARGYNKTQMKLFSNDTSFVCSKKFKVADLNYPSITIDNLASEVVKIKRRVKNVGSPATYVANVKAPPRVSVSVEPNTLKFTRTGEEKSFTVVLKRVPNDYHRGSVFGRLAWSNGKHHVRSPILVVLG | 731 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 7560508 | 7570000 | - | CmaCh16G009800.1 | Cma16g00980 | 311578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma16g00980 | 731 | Gene3D | - | 326 | 456 | - | - | |
Cma16g00980 | 731 | CDD | PA_subtilisin_like | 335 | 447 | - | - | |
Cma16g00980 | 731 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 38 | 97 | IPR037045 | - | |
Cma16g00980 | 731 | Gene3D | Peptidase S8/S53 domain | 128 | 599 | IPR036852 | GO:0004252|GO:0006508 | |
Cma16g00980 | 731 | Gene3D | - | 603 | 730 | - | - | |
Cma16g00980 | 731 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 517 | 527 | IPR023828 | - | |
Cma16g00980 | 731 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 101 | 586 | - | - | |
Cma16g00980 | 731 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 48 | 731 | IPR045051 | - | |
Cma16g00980 | 731 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 48 | 731 | - | - | |
Cma16g00980 | 731 | CDD | Peptidases_S8_3 | 95 | 552 | IPR034197 | - | |
Cma16g00980 | 731 | Pfam | PA domain | 378 | 445 | IPR003137 | - | |
Cma16g00980 | 731 | SUPERFAMILY | Subtilisin-like | 96 | 590 | IPR036852 | GO:0004252|GO:0006508 | |
Cma16g00980 | 731 | Pfam | Subtilase family | 126 | 578 | IPR000209 | GO:0006508|GO:0008236 | |
Cma16g00980 | 731 | PRINTS | Subtilisin serine protease family (S8) signature | 125 | 144 | IPR015500 | - | |
Cma16g00980 | 731 | PRINTS | Subtilisin serine protease family (S8) signature | 516 | 532 | IPR015500 | - | |
Cma16g00980 | 731 | PRINTS | Subtilisin serine protease family (S8) signature | 192 | 205 | IPR015500 | - | |
Cma16g00980 | 731 | SUPERFAMILY | PA domain | 385 | 435 | IPR046450 | - | |
Cma16g00980 | 731 | Pfam | Fibronectin type-III domain | 632 | 728 | IPR041469 | - | |
Cma16g00980 | 731 | Pfam | Peptidase inhibitor I9 | 50 | 97 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma16g00980 | Cma-Chr16:7560508 | Cma16g00989 | Cma-Chr16:7617953 | 0 | dispersed | |
Cma16g00984 | Cma-Chr16:7576425 | Cma16g00980 | Cma-Chr16:7560508 | 1.53E-28 | dispersed | |
Cma16g00985 | Cma-Chr16:7580323 | Cma16g00980 | Cma-Chr16:7560508 | 0 | dispersed | |
Cma16g00990 | Cma-Chr16:7626761 | Cma16g00980 | Cma-Chr16:7560508 | 1.18E-26 | dispersed | |
Cma16g00976 | Cma-Chr16:7523164 | Cma16g00980 | Cma-Chr16:7560508 | 0 | proximal | |
Cma16g00980 | Cma-Chr16:7560508 | Cma16g00982 | Cma-Chr16:7574882 | 4.12E-49 | proximal | |
Cma16g00979 | Cma-Chr16:7548381 | Cma16g00980 | Cma-Chr16:7560508 | 1.01E-53 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma16g00980 | - | - | csv:105434448 | 1038.1 |