Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma16g00988 | ATGGAGGCCTTCAATCTTCCTCCTTTACTTCTCCCCTTCTTTCTTTTTGCTCTCTTACAAACATCTACCATTGCAGCCAAGAAGTCTTATATTGTTTACTTGGGATCACATTCACATGGCTTCAATCCTTCTGCTCTTGATCTCCAACTTGCAACACAAACTCACTATAATCTACTTGGATCCGTGTTAGGAAGCAATGAAGCAGCTAAAGAAGCAATCTTTTACTCATACAATAGAAATATCAATGGCTTTGCCGCTGTTCTTGATCAAAAAGTTGCAGAAGTTGTAGCAAAGCATCCTGATGTGATATCAGTATATGAAAACAAAGGACTAAAACTGCACACAACACGATCATGGAACTTTCTTGGAGTTGAGAATGATGGTGGAGTTCCTTCAAACTCACTTTGGAACCTTTCAAGTTTTGGTGAATCTACAATCATTGGCAACATTGATACAGGCGTTTGGCCAGAATCAAAGAGTTTTAGTGATGAAGGATATGGACCTATCCCAAAAAGATGGAAGGGAAGTTGTGAAGGTGGCTCCAACTTTCGTTGCAACAGATGTAAAATTGAAGATTTGAAATGCAGGAAGCTGATTGGAGCACGATATTTCAACAAAGGATATATATCCGTGGTGGAACCTAAACCTCTCAACTCAAGCTATGAAACAACAAGGGACGATGATGGGCATGGAACACACACCTTATCCACAGCTGGAGGCAATTTCGTTGATGGAGTAAGCTTTTTTGGGAATGGTAATGGCACTGCAAAAGGGGGTTCCCCTAAAGCCCGTGTTGCTGCCTATAAAGTATGTTGGCCTCCAGCGTTGTATGGTTCGTGTTTTATGGCTGATATTGTAGCTGGCTTTGAAGCTGCCATTAGTGACGGAGTTGATGTTCTATCGGTTTCACTCGGTGGACTTCCTATGGAATTTTCTGACGATCTAATGGCTGTAGTGTCCTTCCATGCCGTGAAGAATGGCATCACTGTTGTTTGTTCTGGTGGAAATTTTGGACCAGTTGAAAAAAGTGTCTCAAATATCGCACCATGGATGATAACTGTGGGAGCTAGCACAATTGACAGGCTTTTTACTACTTACGTGGTGTTGGGAAACAAGATGCGCTTAAAGGGTGAAAGTCTTTCTAATCAAATATTGCCAGCTAAGAAGTTCTATCCGCTTATCCGTTCTTTAGATGCAAAATTCAACAATACCCTTCCTAACGACGCCCAAACATGTGCAAAAGGGTCTCTCGATCCTAAAAAGGTCAAAGGAAAAATTGTAATCTGCGTTAATTTGGGCGACGCTATGGAGAAAAGTCATGTGGTTGCTCAAGCAGGTGCTGTTGGGATAATTCTTGTTAATTATGAGGATATTGGGGATGGACTTTTGCCAGCTGCACACTTAATTCCTGCGGCACATATAAGCTACACCGATAGAAAATCAATCGACCAATACATCCAGTCTACTAAAAGTCCAATGGCTTACATGACTCGTGTGAAGACTGAATTGGGAATCAAACCAGCACCAATTATGGCTTCATTCTCATCAAGAGGTCCCAGCCTAATTGAGCCCTTAATACTCAAGCCTGATATAACAGCACCAGGTGTGAATATACTAGCGGCTTTCTCTGATGAAGTATCACCAACGGGTTCACCTTTTGATAAACGTCGGGTTCAATATAATGTATTATCAGGCACTTCTATGTCATGCCCCCATATTTCTGGCATCGTTGGCCAACTCAAAACCCTTTATCCAAAATGGAGTCCAGCAGCTCTTAGATCTGCAATCATGACCACAGCTGAAACCAAAGCCAATGACTTAAATCCAATACTAAACCCAGAAAAGGAGAAAGTAGACCCCTTGGCATATGGTGCCGGCCATGTCCAACCAAACAAAGCAGCAGATCCTGGCCTTGTTTACGACCTCTCCACCCAAGACTATTTGAACTTCCTATGTGCCCGTGGCTACAATAAAACACTAATGAAACTATTCACTAATGATACTTCATTCGTTTGTTTAAAGTCATTCAAAGTAACAGATTTAAACTATCCATCAATCTCGATGAATTATCTGAAATCAGAGGCGGTAGAGGTCAAAAGAAGAGTAACAAATGTGGGAAGTCCAGGTACGTATGTTGCCCAAATCGAAGCACCGCCAGAAGTTTCGATTTCGGTAGACCCAAGTACTTTGAAGTTCACCAAAACTGGTGAAGAGAAGGATTTCAAAGTTGTGTTGAAGAAGGTGTCAAATAATCAAACTGATGGGGGTCGAGGCAGGGGTCGAGGCGCGGGTCACGGGTCACGGCCTGCAATCACAGGTTGCAAGCTGGGTTGCAATTTGGACCTCAGGAAGCTAATTGGAGTACGGTACTTCAATAAAGGTTACACCGCCCTTGCGGGATCTCTTGATGGCAGCTTTGACACGTGTTCGGATGCAGACATCCTAGCCGCCATAGAAGCTGCTATTACTGATGCTGTTGACGTTCTTTCACTTTCACTCGGTCGAAGTTCCATGGAGTTTTTCGATGATGTAACGGCGATTGAATCCTTCCATGCGGTTCAACAAGGGATAGTCGTCGTTTGCTCGAGTGGAAACTCAGGACCCGATCCACAGAGCGTAGAAAATGTGGCGCCTTGGCTTTTCACTGTGGCTGCTAGCACAATCACCGGACAATTTACTAGTTATGTGGCCCTTGGAAACAAGAAGCATATCACGGTGAAAGGGAAGATTATAGTTTGCGTTAGAGGAGGGGATAGTGCAAGAGTGGACAAGGGTTACGTGGCTGCTCAAGCAGGTGCTGTTGGGATGACTCTAGCCAATAGCGAGGAAGATGGGAATGAACTTATAGCCGATGCACACCTGCTTTCTGTCTCCCACATAAGCTATATCGATGGTGAAACAGTCTATGAATACATCAACTCCACTGTGTAA | 2931 | 43.47 | MEAFNLPPLLLPFFLFALLQTSTIAAKKSYIVYLGSHSHGFNPSALDLQLATQTHYNLLGSVLGSNEAAKEAIFYSYNRNINGFAAVLDQKVAEVVAKHPDVISVYENKGLKLHTTRSWNFLGVENDGGVPSNSLWNLSSFGESTIIGNIDTGVWPESKSFSDEGYGPIPKRWKGSCEGGSNFRCNRCKIEDLKCRKLIGARYFNKGYISVVEPKPLNSSYETTRDDDGHGTHTLSTAGGNFVDGVSFFGNGNGTAKGGSPKARVAAYKVCWPPALYGSCFMADIVAGFEAAISDGVDVLSVSLGGLPMEFSDDLMAVVSFHAVKNGITVVCSGGNFGPVEKSVSNIAPWMITVGASTIDRLFTTYVVLGNKMRLKGESLSNQILPAKKFYPLIRSLDAKFNNTLPNDAQTCAKGSLDPKKVKGKIVICVNLGDAMEKSHVVAQAGAVGIILVNYEDIGDGLLPAAHLIPAAHISYTDRKSIDQYIQSTKSPMAYMTRVKTELGIKPAPIMASFSSRGPSLIEPLILKPDITAPGVNILAAFSDEVSPTGSPFDKRRVQYNVLSGTSMSCPHISGIVGQLKTLYPKWSPAALRSAIMTTAETKANDLNPILNPEKEKVDPLAYGAGHVQPNKAADPGLVYDLSTQDYLNFLCARGYNKTLMKLFTNDTSFVCLKSFKVTDLNYPSISMNYLKSEAVEVKRRVTNVGSPGTYVAQIEAPPEVSISVDPSTLKFTKTGEEKDFKVVLKKVSNNQTDGGRGRGRGAGHGSRPAITGCKLGCNLDLRKLIGVRYFNKGYTALAGSLDGSFDTCSDADILAAIEAAITDAVDVLSLSLGRSSMEFFDDVTAIESFHAVQQGIVVVCSSGNSGPDPQSVENVAPWLFTVAASTITGQFTSYVALGNKKHITVKGKIIVCVRGGDSARVDKGYVAAQAGAVGMTLANSEEDGNELIADAHLLSVSHISYIDGETVYEYINSTV | 976 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 7599287 | 7608087 | - | CmaCh16G009880.1 | Cma16g00988 | 311586 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma16g00988 | 976 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 28 | 750 | IPR045051 | - | |
Cma16g00988 | 976 | Gene3D | - | 651 | 761 | - | - | |
Cma16g00988 | 976 | SUPERFAMILY | PA domain | 895 | 970 | IPR046450 | - | |
Cma16g00988 | 976 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 565 | 575 | IPR023828 | - | |
Cma16g00988 | 976 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 807 | 901 | IPR045051 | - | |
Cma16g00988 | 976 | Pfam | Fibronectin type-III domain | 680 | 752 | IPR041469 | - | |
Cma16g00988 | 976 | SUPERFAMILY | Subtilisin-like | 786 | 902 | IPR036852 | GO:0004252|GO:0006508 | |
Cma16g00988 | 976 | CDD | Peptidases_S8_3 | 111 | 600 | IPR034197 | - | |
Cma16g00988 | 976 | Pfam | Peptidase inhibitor I9 | 29 | 114 | IPR010259 | - | |
Cma16g00988 | 976 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 28 | 750 | - | - | |
Cma16g00988 | 976 | CDD | PA_subtilisin_like | 366 | 494 | - | - | |
Cma16g00988 | 976 | PRINTS | Subtilisin serine protease family (S8) signature | 226 | 239 | IPR015500 | - | |
Cma16g00988 | 976 | PRINTS | Subtilisin serine protease family (S8) signature | 564 | 580 | IPR015500 | - | |
Cma16g00988 | 976 | PRINTS | Subtilisin serine protease family (S8) signature | 142 | 161 | IPR015500 | - | |
Cma16g00988 | 976 | Pfam | Subtilase family | 808 | 897 | IPR000209 | GO:0006508|GO:0008236 | |
Cma16g00988 | 976 | CDD | PA_subtilisin_like | 905 | 975 | - | - | |
Cma16g00988 | 976 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 17 | 114 | IPR037045 | - | |
Cma16g00988 | 976 | Pfam | PA domain | 412 | 480 | IPR003137 | - | |
Cma16g00988 | 976 | Pfam | PA domain | 898 | 966 | IPR003137 | - | |
Cma16g00988 | 976 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 903 | 975 | IPR045051 | - | |
Cma16g00988 | 976 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 903 | 975 | - | - | |
Cma16g00988 | 976 | SUPERFAMILY | Subtilisin-like | 113 | 638 | IPR036852 | GO:0004252|GO:0006508 | |
Cma16g00988 | 976 | Pfam | Subtilase family | 143 | 608 | IPR000209 | GO:0006508|GO:0008236 | |
Cma16g00988 | 976 | Gene3D | Peptidase S8/S53 domain | 807 | 888 | IPR036852 | GO:0004252|GO:0006508 | |
Cma16g00988 | 976 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 685 | 976 | - | - | |
Cma16g00988 | 976 | Gene3D | - | 360 | 503 | - | - | |
Cma16g00988 | 976 | Gene3D | - | 905 | 975 | - | - | |
Cma16g00988 | 976 | Gene3D | - | 889 | 904 | - | - | |
Cma16g00988 | 976 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 807 | 901 | - | - | |
Cma16g00988 | 976 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 118 | 634 | - | - | |
Cma16g00988 | 976 | Gene3D | Peptidase S8/S53 domain | 145 | 647 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma16g00982 | Cma-Chr16:7574882 | Cma16g00988 | Cma-Chr16:7599287 | 1.12E-47 | dispersed | |
Cma16g00988 | Cma-Chr16:7599287 | Cma16g01002 | Cma-Chr16:7712432 | 1.92E-23 | dispersed | |
Cma16g00986 | Cma-Chr16:7591915 | Cma16g00988 | Cma-Chr16:7599287 | 1.98E-17 | proximal | |
Cma16g00987 | Cma-Chr16:7597941 | Cma16g00988 | Cma-Chr16:7599287 | 1.58E-121 | tandem | |
Cma16g00988 | Cma-Chr16:7599287 | Cma16g00989 | Cma-Chr16:7617953 | 3.91E-43 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma16g00988 | - | - | bhj:120090550 | 1038.48 |