Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g00989 ATGGAGGCCTTCAATCTTCCTCCTTTACTTCTCCCCTTCTTTCTTTTTGCTCTCTTACAAACATCTACCATTGCAGCCAAGAAGTCTTATATTGTTTACTTGGGATCACATTCACATGGTTTGAATCCTTCTGCTCTTGATCTCCAACTTACAACACAATCTCACTATAATCTACTTGGATCCGTGTTAGGAAGCAATGAAGCAGCTAAAGAAGCAATCTTTTACTCATACAATAGAAATATCAATGGCTTTGCCGCTGTTCTTGATCAAAAAGTTGCAGAAGTTGTAGCAAAGCATCCTGATGTGATATCAGTATATGAAAACAAAGGACTAAAACTGCACACAACACGATCATGGAACTTTCTTGGAGTTGAGAATGATGGTGGAGTTCCTTCAAACTCACTTTGGAACCTTTCAAGTTTTGGTGAATCTACAATCATTGGCAACATTGATACAGGCGTTTGGCCAGAATCAAAGAGTTTTAGTGATGAAGGATATGGACCTATCCCAAAAAGATGGAAGGGAAGTTGTGAAGGTGGCTCCAACTTTCGTTGCAACAGATGTAAAATTGAAGATTTTAAATGCAGGAAGCTGATTGGAGCACGATATTTCAACAAAGGATATATATCCGTTGTGGAACCTAAACCTCTCAACTCAAGCTATGAAACAGCAAGGGACCATGATGGGCATGGAACACACACCTTATCCACAGCTGGAGGCAATTTCGTTGAAGGAGTAAGCATTTTTGGAAATGGTTATGGTACTGCAAAAGGGGGTTCCCCTAAAGCCCTTGTTGCCGCCTATAGAGTATGTTGGCCTCAAACGTTGTATGGTGCGTGTTTTATCGCCGATATTGTAGCTGGCTTTGAAGCTGCCATTAGTGACGGAGTTGATGTTCTATCGGTTTCACTCGGTGGAGATGCTACTGAATTTTCTAACGATCTAATGGCTATAATGTCTTTCCATGCTGTGAAGAATGGCATCACTGTTGTTTGTTCTGCTGGAAATTCAGGACCAACTGAAAGCATAGTCACAAATGTCGCACCATGGATGATAACTGTGGGAGCTAGCACAATTGACAGGCATTTTACCACTTACGTGGTGTTGGGAAACAAGACGCGCTTGAAGGGTGAAAGTCTTTCTAATCAAATATTGCCAGCTAAGAAGTTCTATCCGTTGATCCATTCTTTAGATGCAAAACTCAACAATGTCTCTACTTACGACGCTCAAACATGTGAGAAAGGAGCTCTTGATCCTAAAAAGGTACAAGGAAAAATTGTAGTTTGCGTTAATGTGGGCGACCCTATGGCCAAAAGTTATGTGGCTGCTCAAGCAGGTGCTATTGGGATAATTCTTGTTAATTACGAGGATATTGGGGATGAACTTTTGCCTGCTGCACACTTACTTCCTGCTGCACATATAAGCTACACCGATAGGAAATCAATCGACCAATACATCCAGTCTACAAAAAGCCCAATGGCTTACATAACTCGCGTGAAGACTGAGTTGGGAGTCAAACCAGCCCCAATTATGGCTTCATTCTCGTCAAGAGGTCCTAACCCAATTGAGCCCTCAATACTCAAGCCTGATATAACAGCACCAGGTGTGAATATACTAGCGGCTTTCTCTGACGAAGCATCACCAACTGGTTCACCCTTTGATAAACGTCGGATTCTATATACTGTATTATCAGGCACTTCTATGTCATGCCCCCATATTTCTGGTGTCGTTGGCCTTCTCAAAACCCTTTATCCAAAATGGAGTCCTGCCGCTATCAGATCTGCAATCATGACCACAGCTGAAACCAAAGCCAATGACTTGAATCCAATACTAAACCCAGAAAAGGAGAAAGTAAACCCCTTAGCCTATGGTGCCGGCCATGTCCAACCAAACAAAGCAGCAAATCCTGGGCTTGTTTACGACCTCTCCACCCAAGACTACTTGAACTTCTTATGTGCTCATGGCTACAATAAAACACAAATGAAACTATTCTCTAATGATACTTCATTCGTTTGTTCAAAGTCAGTCAAAGTAACAGATTTGAACTACCCATCAATCTCGATGAATAATCTGAAATCAAAGGAAGTAGAGGTCAAAAGAAGAGTAAAAAATGTGGGAAGTCCAGGTACGTATGTTGCCCAAGTTGAGGCACCGCCAGGAGTTTCAGTTTCGGTAGACCCAAATACTTTGAAGTTCACCAAAACTGGTGAAGAGAAGGATTTCAAAGTTGTGTTGAGGAGGGTGCCAAATAATCAAACTGATGGGTATGTTTTTGGAAAACTTGTGTGGTATGATGGGAAGCATCGTGTTAGCAGTCCAATTTTTGTGACATTAACGAGGGAGTGA 2346 41.82 MEAFNLPPLLLPFFLFALLQTSTIAAKKSYIVYLGSHSHGLNPSALDLQLTTQSHYNLLGSVLGSNEAAKEAIFYSYNRNINGFAAVLDQKVAEVVAKHPDVISVYENKGLKLHTTRSWNFLGVENDGGVPSNSLWNLSSFGESTIIGNIDTGVWPESKSFSDEGYGPIPKRWKGSCEGGSNFRCNRCKIEDFKCRKLIGARYFNKGYISVVEPKPLNSSYETARDHDGHGTHTLSTAGGNFVEGVSIFGNGYGTAKGGSPKALVAAYRVCWPQTLYGACFIADIVAGFEAAISDGVDVLSVSLGGDATEFSNDLMAIMSFHAVKNGITVVCSAGNSGPTESIVTNVAPWMITVGASTIDRHFTTYVVLGNKTRLKGESLSNQILPAKKFYPLIHSLDAKLNNVSTYDAQTCEKGALDPKKVQGKIVVCVNVGDPMAKSYVAAQAGAIGIILVNYEDIGDELLPAAHLLPAAHISYTDRKSIDQYIQSTKSPMAYITRVKTELGVKPAPIMASFSSRGPNPIEPSILKPDITAPGVNILAAFSDEASPTGSPFDKRRILYTVLSGTSMSCPHISGVVGLLKTLYPKWSPAAIRSAIMTTAETKANDLNPILNPEKEKVNPLAYGAGHVQPNKAANPGLVYDLSTQDYLNFLCAHGYNKTQMKLFSNDTSFVCSKSVKVTDLNYPSISMNNLKSKEVEVKRRVKNVGSPGTYVAQVEAPPGVSVSVDPNTLKFTKTGEEKDFKVVLRRVPNNQTDGYVFGKLVWYDGKHRVSSPIFVTLTRE 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7617953 7621839 - CmaCh16G009890.1 Cma16g00989 311587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g00989 781 ProSiteProfiles Serine proteases, subtilase domain profile. 118 634 - -
Cma16g00989 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Cma16g00989 781 Pfam Fibronectin type-III domain 680 776 IPR041469 -
Cma16g00989 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Cma16g00989 781 Pfam Subtilase family 143 609 IPR000209 GO:0006508|GO:0008236
Cma16g00989 781 CDD Peptidases_S8_3 111 600 IPR034197 -
Cma16g00989 781 CDD PA_subtilisin_like 366 496 - -
Cma16g00989 781 Gene3D - 360 503 - -
Cma16g00989 781 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Cma16g00989 781 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Cma16g00989 781 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Cma16g00989 781 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Cma16g00989 781 SUPERFAMILY Subtilisin-like 113 638 IPR036852 GO:0004252|GO:0006508
Cma16g00989 781 Gene3D Peptidase S8/S53 domain 145 647 IPR036852 GO:0004252|GO:0006508
Cma16g00989 781 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 28 779 - -
Cma16g00989 781 Pfam PA domain 410 480 IPR003137 -
Cma16g00989 781 Gene3D - 651 779 - -
Cma16g00989 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 779 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma16g00976 Cma-Chr16:7523164 Cma16g00989 Cma-Chr16:7617953 0 dispersed
Cma16g00980 Cma-Chr16:7560508 Cma16g00989 Cma-Chr16:7617953 0 dispersed
Cma16g00986 Cma-Chr16:7591915 Cma16g00989 Cma-Chr16:7617953 5.54E-29 dispersed
Cma16g00987 Cma-Chr16:7597941 Cma16g00989 Cma-Chr16:7617953 3.98E-141 dispersed
Cma16g00989 Cma-Chr16:7617953 Cma16g01002 Cma-Chr16:7712432 4.22E-32 dispersed
Cma19g00834 Cma-Chr19:7898174 Cma16g00989 Cma-Chr16:7617953 0 dispersed
Cma16g00988 Cma-Chr16:7599287 Cma16g00989 Cma-Chr16:7617953 3.91E-43 tandem
Cma16g00989 Cma-Chr16:7617953 Cma16g00990 Cma-Chr16:7626761 6.28E-19 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g00989 - - bhj:120090550 1101.27