Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma16g01022 | ATGCTCACGAATCACTCAACAAAAACAACCCTAACCCTAACGGAGTATTGTTTTGTTATTCTTCGACCGGGTAGGAAAAGAACAATGAGGATGCTAAAAAACATGCTACAAGAAAGGAAGGCAAATCCAAGGAAACAACATAATGATTTTTTTGATTATGTTCTTGAAGAACTTGAAAAACATGGAACTCTTCTCACTCAAGAAATGGCTTTGGACTTGATGTTCTTTCTCCTTTTTGCAAGCTTTGAAACCACTTCACTTGCTCTAACTTTAGCCATCAAATTTCTTGTCGACCATCCTCGTGTTGAACATGAGGGCATCTTGAAGAAGAGGGACAAGGCAGATTCAGGACTTACTTGGGCTGAATACAAATCCATGACGTTTACTTTTCAATTCAACGCTGCGACTCGGAAATGTAGCTCGGTTGATATTTCGAGAAGCATTGAAGGATGTCTGAGTATAAGGATTAAAAGAGGTTTGTACGGAGCACGATTTGTGATTCCAGCAGGGTGGATAGTTGTCCCGAGTCTCTCAGCGAAATCAGATGGTGGAGCATCCAAGCATTTGATGGCCTTTGGTGGTGGCCTTAGATTTTGTTTTGGTGCAAAGTTTATCAAGCTA | 621 | 40.74 | MLTNHSTKTTLTLTEYCFVILRPGRKRTMRMLKNMLQERKANPRKQHNDFFDYVLEELEKHGTLLTQEMALDLMFFLLFASFETTSLALTLAIKFLVDHPRVEHEGILKKRDKADSGLTWAEYKSMTFTFQFNAATRKCSSVDISRSIEGCLSIRIKRGLYGARFVIPAGWIVVPSLSAKSDGGASKHLMAFGGGLRFCFGAKFIKL | 207 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 7867556 | 7869399 | - | CmaCh16G010220.1 | Cma16g01022 | 311620 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma16g01022 | 207 | Pfam | Cytochrome P450 | 27 | 127 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma16g01022 | 207 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 192 | 201 | IPR017972 | GO:0005506|GO:0016705 | |
Cma16g01022 | 207 | Gene3D | Cytochrome P450 | 8 | 207 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma16g01022 | 207 | PANTHER | CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 | 24 | 176 | - | - | |
Cma16g01022 | 207 | SUPERFAMILY | Cytochrome P450 | 20 | 204 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma16g01022 | 207 | PANTHER | CYTOCHROME P450 26 | 24 | 176 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma16g01022 | Cma-Chr16:7867556 | Cma14g01069 | Cma-Chr14:5808081 | 1.63E-60 | dispersed | |
Cma16g01017 | Cma-Chr16:7840012 | Cma16g01022 | Cma-Chr16:7867556 | 5.60E-67 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma16g01022 | - | - | zju:107430010 | 193.741 |