Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma16g01148 ATGCGCTTGAGCCCATGGCCATCGCTTAACACGACGTCGTACGAATCATTCTTGGCTGCCTCACTTGGTCCAGTGCTCGTCGTGCTTGGAGGGAATCAGAGGTTTTTCGGAGCAGAAAGCTCCATTTCATCACTCCACAGTCTCCCTGCCAGCACAATGGAAGACAGTAAAAACCATTCTTCTGAAGAAACTACAAAGGGGTTTGCTAAAAGCACCAAAGATCAAAAACTAAATGTGTATGTGTGGGACATGGATGAAACTATCATCCTGCTCAAGTCTTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATATTAAAAGGGGTGAAGAACTTGGCAAAATTTGGGAGACGCAGATTCTTGATCTGTGTGATCATCACTTCTTCTATGAACAAATAGAAAACTATAATCAACCGTTCATTGATGCATTGAGTGAATATGATGACGGCCGGGATCTTTCCAATTATGATTTTGACCAAGATGGGTTTGATCCACCATATGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGCTATAGCCAATAAGTACAAAGAGGGCCTGCAGAATATCTTTGATGAGCAGAAGCTGAAGTTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACAGATAGATGGTTCTCCTCAGCACGAGCTTTCTTGGAGGAGTGTGCATTTTCAGACGAACCACCACTCGTGTCTGCTGATCGGACACGTAACAGTACTTCTAGAAGTTCTCAACATGTTAATATCTTGGTGACTTCTGGATCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTTGATCATCTAATAACACCCGGAAATGTTTACAGTTCGTGGGAAGTAGGAAAACTACAATGTTTCAAATGGATCAAGGAGCGTTTTAACAAGACGAATGTTCGTTTCTGCGTACTAGGCGACGGATGGGAAGAGTGCGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGAGCTGCAACCTGGAAGCCCTCACAGATTTCCTGGTCTGTCTTTGAAAACACTTGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAAGAATAG 1113 42.23 MRLSPWPSLNTTSYESFLAASLGPVLVVLGGNQRFFGAESSISSLHSLPASTMEDSKNHSSEETTKGFAKSTKDQKLNVYVWDMDETIILLKSLLNGTYAEAFCGSKDIKRGEELGKIWETQILDLCDHHFFYEQIENYNQPFIDALSEYDDGRDLSNYDFDQDGFDPPYDDGNKRKLAFRQRAIANKYKEGLQNIFDEQKLKFWEELYEMTDVYTDRWFSSARAFLEECAFSDEPPLVSADRTRNSTSRSSQHVNILVTSGSLIPSLVKCLLFRLDHLITPGNVYSSWEVGKLQCFKWIKERFNKTNVRFCVLGDGWEECEAAQSLKWPFVKIELQPGSPHRFPGLSLKTLGFYFSVIYGNSDSSSDEE 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8824946 8830836 + CmaCh16G011480.1 Cma16g01148 311746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma16g01148 370 PANTHER EYES ABSENT 51 361 IPR028472 GO:0004725
Cma16g01148 370 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 51 361 - -
Cma16g01148 370 Gene3D - 78 340 IPR038102 -
Cma16g01148 370 TIGRFAM EYA-cons_domain: EYA conserved domain 77 352 IPR006545 GO:0007275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma16g01148 - - cmo:103490796 577.4