Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g00044 ATGAGCGGCGGAGGTGAAGGAACGACGCTGGAATTTACCCCGACGTGGGTTGTTGCCGCCGTCTGTACCGTCATCGTCGCCATTTCCCTCGCCTTAGAGCGCCTCTTACACTTCCTCGGAAAATACCTCAAGAAAAAGAACCAGAAGCCGCTCTATGAAGCTCTTCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGGTTTATTTCGCTTCTGCTCACTGTATTTCAAGGCGTTATCTCAAAATTATGTGTTCCTGAGAGTTTGACTGAGCATTTCCTTCCGTGTAATCTGAAGGATAAAGCTAAAGCTGAACACGATTCGCACTCTGGTGAAACTGGTTCGTCAACGACGAAACATTTTCAAACGTTCTTTGTAACGAGTATTTCTGGCTCGGCCAGGCGCCTTCTATCTGAGGGATCGGCTGCACAGGCTGGTTATTGTGCTAAAAAGAATAAGGTGCCATTGCTATCACTTGAAGCATTACATCATTTACATATTTTTATATTCATCCTAGCTATCGTCCACGTGTCATTTTGCGTTCTCACTGTAGTTTTTGGAGGATTGAAGATTCGTCAGTGGAAGCATTGGGAGGATTCTATTGCAAAAGAGAATTACGATACCGAACAAGTTCTAAAACCAAAAGTCACCCATGTCCATCAACATGCTTTTATCAAGGACCACTTTTTGGGTATTGGTAAAGATTCAGCTCTTCTGGGTTGGTTGCATTCCTTCCTCAAGCAATTTTATGCTTCTGTTACTAAATCAGATTATATAACGTTACGGCTTGGTTTCATTATGACACACTGCAGGGGCAACCCGAAGTTTAATTTTCACAAGTACATGATACGTGCCCTTGAAGATGATTTCAAGCATGTTGTCGGTATCAGTTGGTATCTTTGGATCTTCGTGGTTGTCTTCTTGTTCCTTAATGTTAATGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCGTTCTTCTGCTCGCTGTGGGAACAAAGCTGGAACATGTGATAACCCAGCTGGCTCACGAGGTTGCCGAGAAGCACATAGCAATTGAAGGCGAGCTAGTAGTCCAACCATCTGATGATCACTTTTGGTTTCAGCGGCCCCGTTTTGTTCTCTTCTTGATCCATTTCATACTATTCCAAAATGCTTTCGAGATTGGATTTTTCTTCTGGATATGGGTTCAATATGGCTTTGACTCGTGCATCATGGGCCAAGTCCGCTATATCATTCCAAGGCTTATTATTGGGGTGTTTATTCAGGTTCTTTGCAGTTACAGCACCCTACCGCTCTACGCCATCGTCACTCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGATGAACATGTACAAGTAGGCCTAGTTGGTTGGGCTCAGAAGGTGAAGAAAAGAAAGGGACTTAGAGCAGCCGCCGATGCCTCCAGCCAAGGAGGCAAGGAAGGTAGTTCTACTGTGGGGGGGATTCAACTGGGAAGTGCTATGCGCAAGGCTTCTGCACCTCAAGAAATTAAGCCTGATGGCTCCAAATCAGATGGTCTGCCTTAG 1554 44.14 MSGGGEGTTLEFTPTWVVAAVCTVIVAISLALERLLHFLGKYLKKKNQKPLYEALQKVKEELMLLGFISLLLTVFQGVISKLCVPESLTEHFLPCNLKDKAKAEHDSHSGETGSSTTKHFQTFFVTSISGSARRLLSEGSAAQAGYCAKKNKVPLLSLEALHHLHIFIFILAIVHVSFCVLTVVFGGLKIRQWKHWEDSIAKENYDTEQVLKPKVTHVHQHAFIKDHFLGIGKDSALLGWLHSFLKQFYASVTKSDYITLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVNGWHTYFWIAFIPFVLLLAVGTKLEHVITQLAHEVAEKHIAIEGELVVQPSDDHFWFQRPRFVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADASSQGGKEGSSTVGGIQLGSAMRKASAPQEIKPDGSKSDGLP 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 201164 208016 + CmaCh17G000440.1 Cma17g00044 311939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g00044 517 MobiDBLite consensus disorder prediction 495 517 - -
Cma17g00044 517 PANTHER MLO-LIKE PROTEIN 1 505 - -
Cma17g00044 517 Pfam Mlo family 8 479 IPR004326 GO:0006952|GO:0016021
Cma17g00044 517 PANTHER MLO-LIKE PROTEIN 1 1 505 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma17g00044 Cma-Chr17:201164 Cma02g00883 Cma-Chr2:5245432 4.18E-141 dispersed
Cma17g00044 Cma-Chr17:201164 Cma08g00991 Cma-Chr8:6184235 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g00044 K08472 - csv:101211868 943.725