Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g00107 | ATGGGTGGCCACGGAAAGGTCTTTACATTGGCTGAGGTCTCTCAGCACAATACCCGCCAGGACTGTTGGTTGATCATCAATGGCAAGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGATGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTCGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAATCGATGAACAAATACTACGTTGGAGAGATCGACATCTCGACAATCCCTGAACGTTTGACATACACAGCTTCGAAGCAGCCTCACTACAATCAGGATAAGACGACCGAGTTCATCGTCAAGCTTCTCCAATTCCTGGTCCCTCTCGCAATCTTGGGTCTGGCAGTCGGTATCCGCTTTTATAGCAAATCAACCTGA | 405 | 48.15 | MGGHGKVFTLAEVSQHNTRQDCWLIINGKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARESMNKYYVGEIDISTIPERLTYTASKQPHYNQDKTTEFIVKLLQFLVPLAILGLAVGIRFYSKST | 134 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 521732 | 524675 | + | CmaCh17G001070.1 | Cma17g00107 | 312002 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g00107 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 6 | 86 | IPR036400 | - | |
Cma17g00107 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Cma17g00107 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Cma17g00107 | 134 | PANTHER | BNAC04G43300D PROTEIN | 1 | 132 | - | - | |
Cma17g00107 | 134 | PANTHER | CYTOCHROME B5 | 1 | 132 | - | - | |
Cma17g00107 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 80 | IPR001199 | - | |
Cma17g00107 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
Cma17g00107 | 134 | Gene3D | - | 3 | 85 | IPR036400 | - | |
Cma17g00107 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Cma17g00107 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Cma17g00107 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Cma17g00107 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g00987 | Cma-Chr6:6687019 | Cma17g00107 | Cma-Chr17:521732 | 3.76E-31 | dispersed | |
Cma06g01244 | Cma-Chr6:8291203 | Cma17g00107 | Cma-Chr17:521732 | 1.44E-75 | dispersed | |
Cma14g02130 | Cma-Chr14:14625342 | Cma17g00107 | Cma-Chr17:521732 | 1.01E-42 | dispersed | |
Cma15g01010 | Cma-Chr15:6090522 | Cma17g00107 | Cma-Chr17:521732 | 1.00E-61 | dispersed | |
Cma14g01890 | Cma-Chr14:13376466 | Cma17g00107 | Cma-Chr17:521732 | 1.80E-77 | wgd | |
Cma17g00107 | Cma-Chr17:521732 | Cma19g00162 | Cma-Chr19:1082126 | 1.80E-60 | wgd | |
Cma17g00107 | Cma-Chr17:521732 | Cma02g01681 | Cma-Chr2:9474696 | 1.30E-62 | wgd | |
Cma17g00107 | Cma-Chr17:521732 | Cma06g01226 | Cma-Chr6:8175526 | 4.35E-08 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g00107 | K23490 | - | csv:101213506 | 252.292 |