Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g00166 | ATGAGCCAACAACTGGGAGTGCTAAGCGCACTCGATCTTGCAAAAACCCAATGGTACCATTTCACGGCAATCATCATTGCCGGAATGGGTTTCTTCACCGACGCCTACGACCTCTTCTGCATCTCCATCGTCACCAAACTCCTCGGCCGAATCTATTACCATATCCAAAACTCCCCCAGACCCGGATCTCTTCCCCCCAACGTCGCCGCCGCCGTCAACGGCGTTGCCCTCTGCGGCACCCTCGCCGGACAACTCTTCTTCGGCTGGCTCGGCGACAAACTTGGCCGGAAAAGGGTCTACGGCATTACCCTCATTCTCATGGTCCTCTGTTCCATCGCCTCTGGCCTCTCCTTCAGCCACTCCCCAAAAGCCGTTATTTCCACCCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACTATAATGTCGGAATACGCCAATAAAAAAACCCGCGGCGCATTCATCGCCGCCGTCTTCGCAATGCAGGGGTTCGGAATTTTAGTCGGAGGAATCGTTGCTCTGGTAGTCTCCACCGCCTTCAACAACCGCTTCCCTGCACCACCCTACAGCGAAAATCCCTCTCGCCCCACAATTCCGGAGGCGGATTACGTGTGGCGAATCGTTCTAATGTTCGGCGCAATTCCGGCCGGGATAACATACTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCTCTGGTGGCCCAAAACGCAAAACAAGCCGCCGCCGACATGTCAAAAGTGCTGCAAGTCCACCTCGAAGCCGAAGAAGAAAAACCGACAACCGAATCAAATCAAAATCCTAACCGTTTCGGTTTATTCTCGAAGAAATTCGCGAAACGCCATGGGCTCCATTTATTGGGGACAACCACCACATGGTTTCTATTAGACATAGCGTTTTACAGCCAAAACCTCTTCCAAAAAGACATTTTCACGGCCATCGAATGGCTTCCACCGGCGGCAACAATGAGCGAATTAGAAGAATGTTTCAAAATCGCACGCGCACAGACACTAATTGCCCTGTGCGGGACGGTTCCCGGGTACTGGTTCACGGTGGTGTTCATCGATTACATAGGGAGATTCGTGATTCAATTGATGGGGTTCATAATGATGACGATTTTCATGTTTGCTCTGGCTTTTCCATACAATCATTGGAAGGAGAAGCCGCACAGAATTGGGTTTGTGGTGATGTATTCGCTGACGTTTTTCTTTGCGAATTTTGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACTTGCCATGGGATATCGGCGGCGGCAGGGAAGGCAGGGGCGATAGTGGGGGCGTTTGGGTTTTTGTATGCGGCGCAGAGTAAGGATCCGGCGATGACGGAGCCGGGGTACCCGACGGGGATCGGCGTTAAGAATGCTTTGATTGTGTTGGGATGCATTAATTTCTTGGGAGCTTTGTTTACTCTGTTAGTGCCGGAATCCAAAGGCAAATCTTTGGAGGAGTTGACCGGGGAGAACCAAGGGGATGACAATGGCATTGGAACTTCCCCCGTCTGA | 1590 | 52.52 | MSQQLGVLSALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIQNSPRPGSLPPNVAAAVNGVALCGTLAGQLFFGWLGDKLGRKRVYGITLILMVLCSIASGLSFSHSPKAVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILVGGIVALVVSTAFNNRFPAPPYSENPSRPTIPEADYVWRIVLMFGAIPAGITYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVHLEAEEEKPTTESNQNPNRFGLFSKKFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPPAATMSELEECFKIARAQTLIALCGTVPGYWFTVVFIDYIGRFVIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPAMTEPGYPTGIGVKNALIVLGCINFLGALFTLLVPESKGKSLEELTGENQGDDNGIGTSPV | 529 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 859051 | 860640 | - | CmaCh17G001660.1 | Cma17g00166 | 312061 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g00166 | 529 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 1 | 523 | - | - | |
Cma17g00166 | 529 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE | 1 | 523 | - | - | |
Cma17g00166 | 529 | CDD | MFS_PhT | 24 | 506 | - | - | |
Cma17g00166 | 529 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 23 | 507 | IPR020846 | GO:0022857 | |
Cma17g00166 | 529 | SUPERFAMILY | MFS general substrate transporter | 11 | 513 | IPR036259 | - | |
Cma17g00166 | 529 | Pfam | Sugar (and other) transporter | 25 | 513 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Cma17g00166 | 529 | Gene3D | MFS general substrate transporter like domains | 19 | 265 | IPR036259 | - | |
Cma17g00166 | 529 | Gene3D | MFS general substrate transporter like domains | 273 | 526 | IPR036259 | - | |
Cma17g00166 | 529 | TIGRFAM | 2A0109: phosphate:H+ symporter | 11 | 516 | IPR004738 | GO:0005315|GO:0006817|GO:0016021 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma06g01328 | Cma17g00166 | CCT | |
Cma14g01810 | Cma17g00166 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma09g00027 | Cma-Chr9:137993 | Cma17g00166 | Cma-Chr17:859051 | 0 | dispersed | |
Cma14g01811 | Cma-Chr14:12987095 | Cma17g00166 | Cma-Chr17:859051 | 0 | dispersed | |
Cma16g00076 | Cma-Chr16:329719 | Cma17g00166 | Cma-Chr17:859051 | 0 | dispersed | |
Cma17g00166 | Cma-Chr17:859051 | Cma19g00086 | Cma-Chr19:514822 | 0 | dispersed | |
Cma14g01810 | Cma-Chr14:12979490 | Cma17g00166 | Cma-Chr17:859051 | 0 | wgd | |
Cma17g00166 | Cma-Chr17:859051 | Cma19g00085 | Cma-Chr19:510885 | 0 | wgd | |
Cma17g00166 | Cma-Chr17:859051 | Cma06g01328 | Cma-Chr6:8742265 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g00166 | K08176 | - | csv:101212412 | 925.62 |