Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g00166 ATGAGCCAACAACTGGGAGTGCTAAGCGCACTCGATCTTGCAAAAACCCAATGGTACCATTTCACGGCAATCATCATTGCCGGAATGGGTTTCTTCACCGACGCCTACGACCTCTTCTGCATCTCCATCGTCACCAAACTCCTCGGCCGAATCTATTACCATATCCAAAACTCCCCCAGACCCGGATCTCTTCCCCCCAACGTCGCCGCCGCCGTCAACGGCGTTGCCCTCTGCGGCACCCTCGCCGGACAACTCTTCTTCGGCTGGCTCGGCGACAAACTTGGCCGGAAAAGGGTCTACGGCATTACCCTCATTCTCATGGTCCTCTGTTCCATCGCCTCTGGCCTCTCCTTCAGCCACTCCCCAAAAGCCGTTATTTCCACCCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACTATAATGTCGGAATACGCCAATAAAAAAACCCGCGGCGCATTCATCGCCGCCGTCTTCGCAATGCAGGGGTTCGGAATTTTAGTCGGAGGAATCGTTGCTCTGGTAGTCTCCACCGCCTTCAACAACCGCTTCCCTGCACCACCCTACAGCGAAAATCCCTCTCGCCCCACAATTCCGGAGGCGGATTACGTGTGGCGAATCGTTCTAATGTTCGGCGCAATTCCGGCCGGGATAACATACTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCTCTGGTGGCCCAAAACGCAAAACAAGCCGCCGCCGACATGTCAAAAGTGCTGCAAGTCCACCTCGAAGCCGAAGAAGAAAAACCGACAACCGAATCAAATCAAAATCCTAACCGTTTCGGTTTATTCTCGAAGAAATTCGCGAAACGCCATGGGCTCCATTTATTGGGGACAACCACCACATGGTTTCTATTAGACATAGCGTTTTACAGCCAAAACCTCTTCCAAAAAGACATTTTCACGGCCATCGAATGGCTTCCACCGGCGGCAACAATGAGCGAATTAGAAGAATGTTTCAAAATCGCACGCGCACAGACACTAATTGCCCTGTGCGGGACGGTTCCCGGGTACTGGTTCACGGTGGTGTTCATCGATTACATAGGGAGATTCGTGATTCAATTGATGGGGTTCATAATGATGACGATTTTCATGTTTGCTCTGGCTTTTCCATACAATCATTGGAAGGAGAAGCCGCACAGAATTGGGTTTGTGGTGATGTATTCGCTGACGTTTTTCTTTGCGAATTTTGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACTTGCCATGGGATATCGGCGGCGGCAGGGAAGGCAGGGGCGATAGTGGGGGCGTTTGGGTTTTTGTATGCGGCGCAGAGTAAGGATCCGGCGATGACGGAGCCGGGGTACCCGACGGGGATCGGCGTTAAGAATGCTTTGATTGTGTTGGGATGCATTAATTTCTTGGGAGCTTTGTTTACTCTGTTAGTGCCGGAATCCAAAGGCAAATCTTTGGAGGAGTTGACCGGGGAGAACCAAGGGGATGACAATGGCATTGGAACTTCCCCCGTCTGA 1590 52.52 MSQQLGVLSALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIQNSPRPGSLPPNVAAAVNGVALCGTLAGQLFFGWLGDKLGRKRVYGITLILMVLCSIASGLSFSHSPKAVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILVGGIVALVVSTAFNNRFPAPPYSENPSRPTIPEADYVWRIVLMFGAIPAGITYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVHLEAEEEKPTTESNQNPNRFGLFSKKFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPPAATMSELEECFKIARAQTLIALCGTVPGYWFTVVFIDYIGRFVIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPAMTEPGYPTGIGVKNALIVLGCINFLGALFTLLVPESKGKSLEELTGENQGDDNGIGTSPV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 859051 860640 - CmaCh17G001660.1 Cma17g00166 312061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g00166 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 523 - -
Cma17g00166 529 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 1 523 - -
Cma17g00166 529 CDD MFS_PhT 24 506 - -
Cma17g00166 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Cma17g00166 529 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Cma17g00166 529 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cma17g00166 529 Gene3D MFS general substrate transporter like domains 19 265 IPR036259 -
Cma17g00166 529 Gene3D MFS general substrate transporter like domains 273 526 IPR036259 -
Cma17g00166 529 TIGRFAM 2A0109: phosphate:H+ symporter 11 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01328 Cma17g00166 CCT
Cma14g01810 Cma17g00166 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00027 Cma-Chr9:137993 Cma17g00166 Cma-Chr17:859051 0 dispersed
Cma14g01811 Cma-Chr14:12987095 Cma17g00166 Cma-Chr17:859051 0 dispersed
Cma16g00076 Cma-Chr16:329719 Cma17g00166 Cma-Chr17:859051 0 dispersed
Cma17g00166 Cma-Chr17:859051 Cma19g00086 Cma-Chr19:514822 0 dispersed
Cma14g01810 Cma-Chr14:12979490 Cma17g00166 Cma-Chr17:859051 0 wgd
Cma17g00166 Cma-Chr17:859051 Cma19g00085 Cma-Chr19:510885 0 wgd
Cma17g00166 Cma-Chr17:859051 Cma06g01328 Cma-Chr6:8742265 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g00166 K08176 - csv:101212412 925.62