Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g00366 ATGGCATTTTGGTGGACCCTGCTTGTAATAGGATTTGCTTACGCGATCTGTAGGTTACTCCTGATGCTCATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGATGTGATGGACGACGGTAATCAGACGCAGGAGAATAGCTACATCTACATTCCACCTAGAGTAAGGACACAGCAGCAAGACAAGCGAGTCCAATGTTACGAGCCTGCAACTATGAAATACCTGGGCTATTTTCCTGCATTGTCACGAGACGAGGTCAATGATCGTGTTGCTTCAGCCAGGAAAGCGCAGAAAGAATGGGCCAAAAGTAGCTTTAAGCAAAGGCGTTTGCTTTTACGCATACTTTTGAAGTATATAATTGAACATCAAGAGCTTATTTGCGAAATCTCCTCCCGTGACACTGGAAAGACAATAGTGGATGCTAATATGGGAGAAATAATGGCAACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCAGATCATGTGGAAGGGCAACACTTCACAAGAAAGCTCGCGTAGAATTTCATCCCCTTGGAGTTATTGGTGCAATAGTCCCATGGAACTATCCATTTCATAACATTTTCAATCCAGTGCTTGCGGCAGTCTTTGCAGGAAATGGCATTGTAGTTAAGGTTTCAGAACATGCAAGTTGGTCAGGATGCTTCTATGTCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCCGAGAGTTTGGTCGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCTCTAGTATCTTCAGTAGACAAAATGATATTCGTTGGATCTACTGGTGTGGGTAGGATGATAATGAAAAGTGCTGCTGAGACGCTCATTCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCATTTATCGTGTGTGAGGATGTAGATCTTGATCATGTTGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCATTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCATTAGCTGGGAAGTATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTCGTAAATGATGCCTTAGACAGGGGGGCAAAAATTGTTGCTCGTGGAACTTTCGGACATTTACCTGAAGGTGCCGTTGATCAATATTTTCCACCTACCGTTATTGTTGACGTCAACCATACCATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCCATAATGAAATTCAGCACAGATGATGAGGCCGTGAGGCTTGCAAATGATTCAAGATTTGGGCTCGGCTGTTCTGTCTTTTCTGGCAGTCAGCGTCGTGCCAAGAATATTGCTTCGCAGATACGTTCTGGAAGTGTTGCAATTAATGACTTTGCCACAAATTATTTATGTCAGTCCTTGCCATTCGGTGGCGTGAAAGAGAGTGGATTCGGTCGATTTGCGGGCATTGAAGGATTACGAGCTTGTTGTCTCGTCAAAGCAGTCGTCGAAGATAGGTGGTGGCCATACATTCAGACTAAGCATCCTAAGCCTCTTACGTATCCTGTGGCAGACAATGCTTTCGAGTTTCAAATGTCGCTCGTTGAAGCAACGTATGGGCTGAACATATGGGATCGATTGAGAGCGTTGGTCAATGTCCTAAAGATGCTTTCCGAGCAGAACACTCCGGCTAAAGACAACTCTGCCGTTGATGATGGAAGTAAGAGAGCTGATTGA 1812 44.43 MAFWWTLLVIGFAYAICRLLLMLIPPNVPSIEVDASDVMDDGNQTQENSYIYIPPRVRTQQQDKRVQCYEPATMKYLGYFPALSRDEVNDRVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRDTGKTIVDANMGEIMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKVSEHASWSGCFYVRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKSAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFSTDDEAVRLANDSRFGLGCSVFSGSQRRAKNIASQIRSGSVAINDFATNYLCQSLPFGGVKESGFGRFAGIEGLRACCLVKAVVEDRWWPYIQTKHPKPLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEQNTPAKDNSAVDDGSKRAD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2030351 2038996 - CmaCh17G003660.1 Cma17g00366 312261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g00366 603 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Cma17g00366 603 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Cma17g00366 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Cma17g00366 603 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Cma17g00366 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Cma17g00366 603 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Cma17g00366 603 SUPERFAMILY ALDH-like 49 529 IPR016161 GO:0016491
Cma17g00366 603 CDD ALDH_F15-22 69 531 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g01274 Cma17g00366 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00784 Cma-Chr9:3790911 Cma17g00366 Cma-Chr17:2030351 6.11E-48 dispersed
Cma16g00646 Cma-Chr16:3361502 Cma17g00366 Cma-Chr17:2030351 4.19E-32 dispersed
Cma17g00366 Cma-Chr17:2030351 Cma10g00151 Cma-Chr10:688944 5.29E-64 dispersed
Cma17g00366 Cma-Chr17:2030351 Cma08g01274 Cma-Chr8:7737287 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g00366 - - csv:101209796 1131.32