Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g00437 | ATGGACGTGGGTTTGGCTTTGGTTATTGTAATGGCGGTGACGGCGTATCTTCTGTGGTTTACGTTCATTTCCCGGTCGTTAAAAGGGCCTCAAATGTGGCCGTTGCTCGGCAGTCTGCCGGGGTTGATCGAGAATTGCGACCGTTTACACGACTGGATCTCCGACAACCTCCGAGCCTGCGGCGGAACTTATCAAACATGCATATGGGCCTTCCCTTACTTCGCTACAAAACAGGGCCTCGTGACTGTCACGTGCGACCCGAGAAATCTGGAGCATATACTCAAGACCCGATTCGATAATTACCCTAAGGGCCCCACTTGGCAAGCTGTCTTTCACGAGCTACTTGGCCAAGGTATTTTTAATTCTGATGGTGACACGTGGCTCTTCCAGAGAAAAACTGCTGCCTTGGAATTTACTACTAGGACCCTTCGTCAAGCCATGGCTCGATGGGTTAGCCGAGCTATTAAATTGAGGTTTTGTCCTATTCTTAAACAAGCCGAGCTTAATTCTCAGCCGATTGATCTTCAGGATGTGTTGTTGCGGCTTACTTTTGATAATATTTGCGGCTTGGCTTTTGGGAAGGATCCTATGACTTGTGCGCCGGGTTTCCCTGAAAATGGCTTTGCTATGGCTTTTGATCGAGCCACTGAGGCTTCGTTGCAACGGTTTATTTTGCCGGAAGTTCTTTGGAAATTTAAAAAGTGGCTTCGGCTTGGTATGGAAGTCAGCTTGAGCCGGAGTCTAGTTCACATCGAGGAGTATTTATCCAGTGTTATTGATTCACGTAAGCTCGAGTTGCTGAATCAGCTTAAAGACTCGACCCCACATGATGATTTATTGTCACGTTTCATGAAGAAGAAGGAAAGTAATTACTCCAACGCGTTCCTTCGCCATGTGGCGCTTAATTTCATCCTAGCTGGACGGGACACGTCATCCGTTGCGCTGAGCTGGTTCTTCTGGTTGGTCACATTAAACCCACAAATTGAAGAAAAAATCCTCCGCGAGATCTGCACCGTTCTGATTGAGACACGTGGCAATAACATCCAATCATGGCTGGATGAGCCGTTAGGATTTGAAGAGATCGACCGTCTGATTTATCTCAAAGCCGCTCTCACCGAAACCCTTAGACTGTACCCGTCGGTGCCGGAGGATTCAAAGCACGTCGTCGCCGACGACATTCTTCCCGACGGAACCTTCGTTCCGGCAGGATCGTCGGTGACTTATTCAATCTATTCCACCGGAAGAATGAAGTCGACGTGGGGAGAAGACTGCCTCGAATTCCGGCCGGAGCGGTGGCTGACGGCGGACGGGAAGAAATTCATACCGTACGATCCGTACAAATTCGTAGCGTTCAATGCAGGGCCAAGGATCTGCTTGGGGAAGGATTTGGCGTATTTACAGATGAAGTCGATAGCGGCGGCGGTACTTCTCCGACACCGGCTGACGGTGGCGGCAGGTCATAAGGTGGAGCAGAAAATGTCGTTGACGCTGTTTATGAAGTACGGGCTGAAGGTGAACGTTCACCGGAGGGAGTTGGAGGGAATAGTGGAAATCTTAAGGGGCAAAAACGGAAATTCCCAAGGGAAGGATACTCCGTTAGTCGCCGTTGTGAACTGTAACGGCGGGTGTAACGGTTTTAACGACGTACAACGCTAA | 1656 | 49.52 | MDVGLALVIVMAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLIENCDRLHDWISDNLRACGGTYQTCIWAFPYFATKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKQAELNSQPIDLQDVLLRLTFDNICGLAFGKDPMTCAPGFPENGFAMAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNQLKDSTPHDDLLSRFMKKKESNYSNAFLRHVALNFILAGRDTSSVALSWFFWLVTLNPQIEEKILREICTVLIETRGNNIQSWLDEPLGFEEIDRLIYLKAALTETLRLYPSVPEDSKHVVADDILPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLTADGKKFIPYDPYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNVHRRELEGIVEILRGKNGNSQGKDTPLVAVVNCNGGCNGFNDVQR | 551 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 2600115 | 2601770 | - | CmaCh17G004370.1 | Cma17g00437 | 312332 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g00437 | 551 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506|GO:0016705 | |
Cma17g00437 | 551 | PANTHER | CYTOCHROME P450 | 7 | 523 | - | - | |
Cma17g00437 | 551 | PANTHER | CYTOCHROME P450 86A2 | 7 | 523 | - | - | |
Cma17g00437 | 551 | Gene3D | Cytochrome P450 | 24 | 513 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | SUPERFAMILY | Cytochrome P450 | 21 | 510 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | Pfam | Cytochrome P450 | 28 | 497 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g00437 | 551 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g00855 | Cma-Chr5:5843900 | Cma17g00437 | Cma-Chr17:2600115 | 4.44E-128 | dispersed | |
Cma13g00080 | Cma-Chr13:600631 | Cma17g00437 | Cma-Chr17:2600115 | 0 | dispersed | |
Cma17g00437 | Cma-Chr17:2600115 | Cma17g00985 | Cma-Chr17:7250967 | 7.61E-149 | dispersed | |
Cma17g00437 | Cma-Chr17:2600115 | Cma01g00654 | Cma-Chr1:3418591 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g00437 | K15398 | - | csv:101221526 | 1066.6 |