Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g00438 ATGTATAGGAGGCGGCCGGCGGCGTGCGTCGTGACTTTTCCGCAGAATACGGCTGCCGAGTGTGTCGCCGACGTCGATAGAGAAAGCGGAGTCGCAGTTACAGGGAGAGAGAAGACGGGAGAAAGAGATAGGGTTTACATTACACTCAGTCCACGGACCTCAATCCCTAGCGACCTCTCCCTCAGCCGCCCATCCATTCCCCTTTCTCCTCCTTGGACTGATTTCTGCAGCTGTTGTAGGATCTTCAAAGAATGTCTAAAGAAGAAAGCTCGAAATCTAACAGAAGGACAACCCGATACCATTAGTAAGGAAGATCTCCTGTCTAGTTTTCCTGGACGTCATGCTCAAATTCTTGAACTCCTTAACCTTTTAGGTCCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGCACGTCATCGGGAAAAACCAGTGTCATTCTACAGACATTCCGTCATCTCAACCGTCCTTTTGTCTATTCAAGCTGTCGCACTTGTTACAATTTACGAACTCTATTTGAGTCTATCTTGAATCAGTTATTACTTCATCAAAAAGATGCAGGCAGTGGATATTTGAGTGCAAAGCGCTGCGAAAAGCCATCAGATTTCGTTAACTTTCTTCGTGAAGCCTTGGTTAAAGTCGTAAATACTCTTCAGGGAAACCCAGGAAAGTTAAGCACCAAGAAGTTGACAGGACAAGGGCATGGACATATGATCTACCTGATATTTGACAACTTGGAACTTGTTAGAAACTGGGACAAGAGTTCAAGCATACTTCCTTTTCTATTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCTGACACATACTATTCAAATATGGGTTACTTGGAGCCCATCCCTGTTTATTTTTTTGAGTACACAGAAGACGATCTTCGTCAAATTCTTTCGAGGAATCAAACTAATCAAGAGATGTATTCTTCGTTTCTGAGTATTGTATTGGGGCCATTCTGTAGAATTACTAGACAAGTGAATGAGCTATCCATAGCCTTTTCATCATTGTATAAAACGTACCGTGAAGCTTCGGGTGATCTGAACAATGTTCCCAACGAGTCCAGCAAGAGGGCACGTTTCAGTCATTTTCAGCCACATATTGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCAGCGTTCTGAACTTAATAATTTAAAGGAACCAAAGAGAAAAGGTGGCAGTAAGAAACTTGGTGGGTTTGACTCTTCTGAGGACTTGGACTTTCACATGTCTACTTCTGCGAAATATCTTCTTCTTTCAGCTTTCCTTGCTTCAAGAAATCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCGCTAGTAGTCGAAAAAGGAAGAAGAGGCCATCTGAAAAGGCAATTGAGCAGAAGGAAATTTCAGAACAGGAGTTGCTAATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTTGCAGAAACCTCGCTCGAAGATGTGCAAGGAGATGTTGTAATGGAGAGTCAAAATGAGGATAGCGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAACTTTGTGGTCAAAGGAGGAAGTTGCCCACTAGAAGGTTCTACACGATATCGCTCTACAGTGTCCGAAGATATGGCTTCGAAGGTGGCAAGGAGTATTAAGTTTCCCCTCTCCAAATACATGTACAGAAGATAA 1767 42.84 MYRRRPAACVVTFPQNTAAECVADVDRESGVAVTGREKTGERDRVYITLSPRTSIPSDLSLSRPSIPLSPPWTDFCSCCRIFKECLKKKARNLTEGQPDTISKEDLLSSFPGRHAQILELLNLLGPLNSPMLPLFVYGGTSSGKTSVILQTFRHLNRPFVYSSCRTCYNLRTLFESILNQLLLHQKDAGSGYLSAKRCEKPSDFVNFLREALVKVVNTLQGNPGKLSTKKLTGQGHGHMIYLIFDNLELVRNWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDTYYSNMGYLEPIPVYFFEYTEDDLRQILSRNQTNQEMYSSFLSIVLGPFCRITRQVNELSIAFSSLYKTYREASGDLNNVPNESSKRARFSHFQPHIAPALNQIFKISSQRSELNNLKEPKRKGGSKKLGGFDSSEDLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGASSRKRKKRPSEKAIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAETSLEDVQGDVVMESQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMASKVARSIKFPLSKYMYRR 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2605280 2614083 - CmaCh17G004380.1 Cma17g00438 312333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g00438 588 MobiDBLite consensus disorder prediction 460 475 - -
Cma17g00438 588 Gene3D - 110 290 IPR027417 -
Cma17g00438 588 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 318 IPR027417 -
Cma17g00438 588 Pfam AAA ATPase domain 110 269 IPR041664 -
Cma17g00438 588 MobiDBLite consensus disorder prediction 452 475 - -
Cma17g00438 588 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 103 587 IPR020796 GO:0000808|GO:0005634|GO:0006260
Cma17g00438 588 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 300 585 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g00438 K02607 - csv:101223023 852.818