Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g00554 ATGGAATTTCTTACCAAATCAAACGCCTACTCGGAGGAGGAAGAAGAGGAAGAAGAAGAGGAAGAAGATGATGAAATCCGGGGTGTTGCATGCGATTTCTTCCCAAATTCACGCACCCAAAACCAGGAATGGGTTCAACACCCTCCAATAAATCAACCCCAGGATCACCACCCTCTCATGGACTTATCCCTCAGGATGGAAACTAATGGGTTTGGCGTTGTGGAGAGAGAGCACATGTTCGACAAGGTTGTCACTCCAAGCGATGTCGGGAAATTAAACCGTTTGGTCATCCCCAAACAACACGCCGAGAAATACTTCCCTTTGGACTCTGCCACCTACGACAAGGGCCTCATCTTGAACTTCGAGGACCCTAATGGAAAGCCCTGGCGCTTCCGTTACTCTTACTGGAACAGCAGCCAAAGCTACGTGATGACCAAAGGCTGGAGCCGTTTTGTCAAGGAAAAAAAGCTTGATGCAGGCGACGTCGTTTCCTTCCACCGTGGTGTTGGCGATTCCGCTAGGGATCGCCTTTTCATCGACTGGCGCCGCCGTCCTAACGCCCTGACTCCTCCTCCTCACCACCACTTCTCCAACCCTCCTCTCCTCTTCCTCCCACAATCCCTCCGTTGGGCCACCGCCCGCCACTTGCCTCCACCGGCGCATCCGCCGCCTCACCACCGCCTCTATTCCAATTACGCCTTCGAAATCCCTAATTTGGGTATTCCTCATAACAACAATTCTTCCATGTATTATTTTAGACCCACCTCCATGTCCTCTTCTTCGGAAATTGTTGTTCATAGTGAAGGGTCTTCCATGGGGATTAAGAAACCCACCTCCGGTGCTGCGAAACGGCTGAGACTCTTCGGAGTCAATATGGAGTGTGCTACAGAGGATGGAGGAGAAGAAGATCTGTCAAACGGCAGCGTTTCAAGGAGAGGGAAACAGCCCTTCTCGTTGAATTGGGATTTGGTTTGA 975 51.08 MEFLTKSNAYSEEEEEEEEEEEDDEIRGVACDFFPNSRTQNQEWVQHPPINQPQDHHPLMDLSLRMETNGFGVVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSATYDKGLILNFEDPNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFHRGVGDSARDRLFIDWRRRPNALTPPPHHHFSNPPLLFLPQSLRWATARHLPPPAHPPPHHRLYSNYAFEIPNLGIPHNNNSSMYYFRPTSMSSSSEIVVHSEGSSMGIKKPTSGAAKRLRLFGVNMECATEDGGEEDLSNGSVSRRGKQPFSLNWDLV 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4493889 4494863 + CmaCh17G005540.1 Cma17g00554 312449

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g00554 324 SMART B3_2 80 185 IPR003340 GO:0003677
Cma17g00554 324 Coils Coil 1 21 - -
Cma17g00554 324 ProSiteProfiles B3 DNA-binding domain profile. 80 185 IPR003340 GO:0003677
Cma17g00554 324 MobiDBLite consensus disorder prediction 1 26 - -
Cma17g00554 324 MobiDBLite consensus disorder prediction 11 26 - -
Cma17g00554 324 CDD B3_DNA 78 167 IPR003340 GO:0003677
Cma17g00554 324 Gene3D - 73 196 IPR015300 -
Cma17g00554 324 Pfam B3 DNA binding domain 80 184 IPR003340 GO:0003677
Cma17g00554 324 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 22 303 - -
Cma17g00554 324 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 22 303 IPR044800 GO:0003700
Cma17g00554 324 SUPERFAMILY DNA-binding pseudobarrel domain 77 171 IPR015300 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g00554 - - - cmos:111436350 619.002
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00001 Cma-Chr8:7522 Cma17g00554 Cma-Chr17:4493889 5.83E-131 dispersed
Cma16g00597 Cma-Chr16:3085688 Cma17g00554 Cma-Chr17:4493889 8.05E-64 dispersed
Cma17g00554 Cma-Chr17:4493889 Cma18g01042 Cma-Chr18:8666735 3.43E-46 dispersed
Cma17g00554 Cma-Chr17:4493889 Cma15g01340 Cma-Chr15:8405825 4.31E-68 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi15g596 Blo01g00258 Blo12g00198 Bda03g01027 Bda08g00078 . . Bma04g00935 Bma05g01206 . Cmo17g00535 . . . . . . . . . . . . . . . . . . . . . Cone14ag0476 . . . . Csa06g00841 Chy11g01776 . . . Bda11g00402 . Bpe13g00799 Bpe04g00972 . Bma06g01360 Sed01g3764 . . . Cma17g00554 . Car17g00502 . Cpe12g00470 Bhi12g02268 Tan06g1845 Cmetu11g1435 Lac12g1184 Hepe03g0743 . . Cla06g00220 Cam06g0239 Cec06g0239 Cco06g0234 Clacu06g0233 Cmu06g0229 Cre06g1000 Lsi09g01706 . . Cme11g02307
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma14g00333 . 1 157 RAV Transcription Factor Family AT2G36080 62.3 1.6e-48 189.9
Cma06g00497 CST 1 146 RAV Transcription Factor Family AT2G36080 63.1 1.6e-48 189.9
Cma17g00554 . 73 184 RAV Transcription Factor Family AT2G36080 72.2 2.8e-42 169.1
Cma08g00001 . 74 192 RAV Transcription Factor Family AT2G36080 66.4 5.3e-41 164.9
Cma04g00739 . 39 148 RAV Transcription Factor Family AT2G36080 70.8 5.9e-40 161.4
Cma02g00959 . 47 156 RAV Transcription Factor Family AT2G36080 69.0 1.5e-38 156.8
Cma16g00597 CST 28 134 RAV Transcription Factor Family AT2G36080 69.4 5.5e-38 154.8
Cma18g01042 CCT,ECH 165 294 RAV Transcription Factor Family AT2G36080 58.8 7.2e-38 154.5
Cma15g01340 . 49 158 RAV Transcription Factor Family AT2G36080 69.0 9.4e-38 154.1
Cma04g01521 . 177 300 RAV Transcription Factor Family AT2G36080 60.0 6.1e-37 151.4
Cma02g00959 . 47 163 RAV Transcription Factor Family AT2G46870 86.4 5.2e-55 212.2
Cma15g01340 . 21 166 RAV Transcription Factor Family AT2G46870 70.1 3.7e-53 206.1
Cma08g00001 . 79 318 RAV Transcription Factor Family AT2G46870 52.2 5.4e-52 202.2
Cma04g00739 . 39 149 RAV Transcription Factor Family AT2G46870 83.9 3.5e-51 199.5
Cma16g00597 CST 28 135 RAV Transcription Factor Family AT2G46870 82.1 3.6e-48 189.5
Cma04g01521 . 179 291 RAV Transcription Factor Family AT2G46870 68.1 2.4e-39 160.2
Cma18g01042 CCT,ECH 171 283 RAV Transcription Factor Family AT2G46870 66.4 4.0e-39 159.5
Cma06g00497 CST 35 169 RAV Transcription Factor Family AT2G46870 58.6 5.2e-39 159.1
Cma14g00333 . 37 153 RAV Transcription Factor Family AT2G46870 64.2 2.2e-37 153.7
Cma04g02012 CCT,CST,ECH 172 277 RAV Transcription Factor Family AT2G46870 68.8 2.9e-37 153.3
Cma06g00497 CST 1 150 RAV Transcription Factor Family AT3G11580 57.9 1.2e-45 180.6
Cma14g00333 . 37 164 RAV Transcription Factor Family AT3G11580 63.4 2.2e-42 169.9
Cma08g00001 . 65 202 RAV Transcription Factor Family AT3G11580 57.7 5.4e-41 165.2
Cma17g00554 . 69 187 RAV Transcription Factor Family AT3G11580 62.3 1.3e-39 160.6
Cma02g00959 . 47 158 RAV Transcription Factor Family AT3G11580 62.6 4.3e-38 155.6
Cma16g00597 CST 10 134 RAV Transcription Factor Family AT3G11580 57.7 1.6e-37 153.7
Cma04g00739 . 39 148 RAV Transcription Factor Family AT3G11580 62.0 2.8e-37 152.9
Cma02g00959 . 23 163 RAV Transcription Factor Family AT3G61970 70.8 2.0e-51 200.3
Cma17g00554 . 74 294 RAV Transcription Factor Family AT3G61970 53.8 4.4e-51 199.1
Cma15g01340 . 29 175 RAV Transcription Factor Family AT3G61970 67.3 1.3e-50 197.6
Cma08g00001 . 77 188 RAV Transcription Factor Family AT3G61970 82.6 4.1e-49 192.6
Cma04g00739 . 31 169 RAV Transcription Factor Family AT3G61970 67.6 2.0e-48 190.3
Cma16g00597 CST 17 135 RAV Transcription Factor Family AT3G61970 74.8 1.7e-47 187.2
Cma04g01521 . 174 291 RAV Transcription Factor Family AT3G61970 67.2 6.0e-40 162.2
Cma18g01042 CCT,ECH 167 283 RAV Transcription Factor Family AT3G61970 64.4 2.5e-38 156.8
Cma04g02012 CCT,CST,ECH 165 277 RAV Transcription Factor Family AT3G61970 66.1 3.6e-37 152.9
Cma08g00001 . 70 195 RAV Transcription Factor Family AT4G01500 64.2 2.1e-41 167.2
Cma02g00959 . 48 163 RAV Transcription Factor Family AT4G01500 66.7 6.0e-41 165.6
Cma15g01340 . 30 166 RAV Transcription Factor Family AT4G01500 59.2 1.3e-40 164.5
Cma16g00597 CST 15 134 RAV Transcription Factor Family AT4G01500 62.7 8.7e-40 161.8
Cma04g00739 . 40 167 RAV Transcription Factor Family AT4G01500 60.7 1.6e-38 157.5
Cma14g00333 . 32 231 RAV Transcription Factor Family AT5G06250 54.6 1.1e-53 207.6
Cma06g00497 CST 27 232 RAV Transcription Factor Family AT5G06250 51.5 3.6e-52 202.6
Cma08g00001 . 80 188 RAV Transcription Factor Family AT5G06250 66.4 7.0e-40 161.8
Cma04g00739 . 40 148 RAV Transcription Factor Family AT5G06250 67.2 1.2e-39 161.0
Cma16g00597 CST 29 134 RAV Transcription Factor Family AT5G06250 67.5 1.0e-38 157.9
Cma02g00959 . 48 156 RAV Transcription Factor Family AT5G06250 65.5 1.3e-38 157.5
Cma15g01340 . 50 158 RAV Transcription Factor Family AT5G06250 64.7 1.5e-37 154.1
Cma04g01521 . 177 287 RAV Transcription Factor Family AT5G06250 62.2 3.2e-37 152.9
Cma18g01042 CCT,ECH 168 277 RAV Transcription Factor Family AT5G06250 62.7 9.4e-37 151.4
Cma11g00470 . 45 322 RAV Transcription Factor Family AT1G50680 53.5 3.9e-80 295.8
Cma10g00479 . 87 380 RAV Transcription Factor Family AT1G50680 50.2 2.1e-78 290.0
Cma11g00827 . 52 279 RAV Transcription Factor Family AT1G50680 59.9 5.3e-77 285.4
Cma11g00470 . 37 322 RAV Transcription Factor Family AT1G51120 52.2 5.1e-83 305.4
Cma11g00827 . 52 279 RAV Transcription Factor Family AT1G51120 62.2 3.8e-78 289.3
Cma10g00479 . 83 380 RAV Transcription Factor Family AT1G51120 50.2 5.0e-78 288.9
Cma18g01042 CCT,ECH 17 335 RAV Transcription Factor Family AT1G13260 62.6 1.6e-100 363.6
Cma04g01521 . 25 324 RAV Transcription Factor Family AT1G13260 65.9 1.0e-99 360.9
Cma15g00991 CCT,CST,ECH 36 289 RAV Transcription Factor Family AT1G13260 68.1 9.1e-93 337.8
Cma04g02012 CCT,CST,ECH 40 326 RAV Transcription Factor Family AT1G13260 62.4 7.2e-90 328.2
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT1G13260 64.5 4.9e-38 156.0
Cma17g00554 . 72 184 RAV Transcription Factor Family AT1G13260 68.4 1.1e-37 154.8
Cma08g00001 . 81 189 RAV Transcription Factor Family AT1G13260 70.0 1.4e-37 154.5
Cma02g00959 . 49 176 RAV Transcription Factor Family AT1G13260 62.0 7.1e-37 152.1
Cma14g00333 . 24 154 RAV Transcription Factor Family AT1G13260 60.3 2.1e-36 150.6
Cma04g01521 . 9 310 RAV Transcription Factor Family AT3G25730 63.4 3.8e-96 349.0
Cma18g01042 CCT,ECH 17 302 RAV Transcription Factor Family AT3G25730 64.8 1.2e-94 344.0
Cma04g02012 CCT,CST,ECH 1 296 RAV Transcription Factor Family AT3G25730 60.1 1.7e-88 323.6
Cma15g00991 CCT,CST,ECH 36 289 RAV Transcription Factor Family AT3G25730 66.9 5.6e-87 318.5
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT3G25730 63.1 2.8e-38 156.8
Cma18g01042 CCT,ECH 19 336 RAV Transcription Factor Family AT1G68840 62.8 1.5e-106 383.6
Cma04g01521 . 1 324 RAV Transcription Factor Family AT1G68840 60.2 3.4e-103 372.5
Cma04g02012 CCT,CST,ECH 40 327 RAV Transcription Factor Family AT1G68840 61.5 3.9e-91 332.4
Cma15g00991 CCT,CST,ECH 1 302 RAV Transcription Factor Family AT1G68840 58.4 8.7e-91 331.3
Cma08g00001 . 64 189 RAV Transcription Factor Family AT1G68840 60.1 2.7e-39 160.2
Cma17g00554 . 76 184 RAV Transcription Factor Family AT1G68840 70.3 1.0e-38 158.3
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT1G68840 62.8 8.6e-38 155.2
Cma16g00597 CST 20 141 RAV Transcription Factor Family AT1G68840 63.0 2.5e-37 153.7
Cma02g00959 . 48 156 RAV Transcription Factor Family AT1G68840 69.4 5.6e-37 152.5
Cma04g00739 . 40 158 RAV Transcription Factor Family AT1G68840 63.6 9.5e-37 151.8
Cma14g00333 . 37 167 RAV Transcription Factor Family AT1G68840 60.2 1.2e-36 151.4
Cma04g01521 . 9 310 RAV Transcription Factor Family AT3G25730 63.4 3.8e-96 349.0
Cma18g01042 CCT,ECH 17 302 RAV Transcription Factor Family AT3G25730 64.8 1.2e-94 344.0
Cma04g02012 CCT,CST,ECH 1 296 RAV Transcription Factor Family AT3G25730 60.1 1.7e-88 323.6
Cma15g00991 CCT,CST,ECH 36 289 RAV Transcription Factor Family AT3G25730 66.9 5.6e-87 318.5
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT3G25730 63.1 2.8e-38 156.8
Cma11g00470 . 37 322 RAV Transcription Factor Family AT1G51120 52.2 5.1e-83 305.4
Cma11g00827 . 52 279 RAV Transcription Factor Family AT1G51120 62.2 3.8e-78 289.3
Cma10g00479 . 83 380 RAV Transcription Factor Family AT1G51120 50.2 5.0e-78 288.9
Cma06g00497 CST 1 150 RAV Transcription Factor Family AT3G11580 57.9 1.2e-45 180.6
Cma14g00333 . 37 164 RAV Transcription Factor Family AT3G11580 63.4 2.2e-42 169.9
Cma08g00001 . 65 202 RAV Transcription Factor Family AT3G11580 57.7 5.4e-41 165.2
Cma17g00554 . 69 187 RAV Transcription Factor Family AT3G11580 62.3 1.3e-39 160.6
Cma02g00959 . 47 158 RAV Transcription Factor Family AT3G11580 62.6 4.3e-38 155.6
Cma16g00597 CST 10 134 RAV Transcription Factor Family AT3G11580 57.7 1.6e-37 153.7
Cma04g00739 . 39 148 RAV Transcription Factor Family AT3G11580 62.0 2.8e-37 152.9
Cma08g00001 . 70 195 RAV Transcription Factor Family AT4G01500 64.2 2.1e-41 167.2
Cma02g00959 . 48 163 RAV Transcription Factor Family AT4G01500 66.7 6.0e-41 165.6
Cma15g01340 . 30 166 RAV Transcription Factor Family AT4G01500 59.2 1.3e-40 164.5
Cma16g00597 CST 15 134 RAV Transcription Factor Family AT4G01500 62.7 8.7e-40 161.8
Cma04g00739 . 40 167 RAV Transcription Factor Family AT4G01500 60.7 1.6e-38 157.5
Cma14g00333 . 1 157 RAV Transcription Factor Family AT2G36080 62.3 1.6e-48 189.9
Cma06g00497 CST 1 146 RAV Transcription Factor Family AT2G36080 63.1 1.6e-48 189.9
Cma17g00554 . 73 184 RAV Transcription Factor Family AT2G36080 72.2 2.8e-42 169.1
Cma08g00001 . 74 192 RAV Transcription Factor Family AT2G36080 66.4 5.3e-41 164.9
Cma04g00739 . 39 148 RAV Transcription Factor Family AT2G36080 70.8 5.9e-40 161.4
Cma02g00959 . 47 156 RAV Transcription Factor Family AT2G36080 69.0 1.5e-38 156.8
Cma16g00597 CST 28 134 RAV Transcription Factor Family AT2G36080 69.4 5.5e-38 154.8
Cma18g01042 CCT,ECH 165 294 RAV Transcription Factor Family AT2G36080 58.8 7.2e-38 154.5
Cma15g01340 . 49 158 RAV Transcription Factor Family AT2G36080 69.0 9.4e-38 154.1
Cma04g01521 . 177 300 RAV Transcription Factor Family AT2G36080 60.0 6.1e-37 151.4
Cma14g00333 . 32 231 RAV Transcription Factor Family AT5G06250 54.6 1.1e-53 207.6
Cma06g00497 CST 27 232 RAV Transcription Factor Family AT5G06250 51.5 3.6e-52 202.6
Cma08g00001 . 80 188 RAV Transcription Factor Family AT5G06250 66.4 7.0e-40 161.8
Cma04g00739 . 40 148 RAV Transcription Factor Family AT5G06250 67.2 1.2e-39 161.0
Cma16g00597 CST 29 134 RAV Transcription Factor Family AT5G06250 67.5 1.0e-38 157.9
Cma02g00959 . 48 156 RAV Transcription Factor Family AT5G06250 65.5 1.3e-38 157.5
Cma15g01340 . 50 158 RAV Transcription Factor Family AT5G06250 64.7 1.5e-37 154.1
Cma04g01521 . 177 287 RAV Transcription Factor Family AT5G06250 62.2 3.2e-37 152.9
Cma18g01042 CCT,ECH 168 277 RAV Transcription Factor Family AT5G06250 62.7 9.4e-37 151.4
Cma02g00959 . 47 163 RAV Transcription Factor Family AT2G46870 86.4 5.2e-55 212.2
Cma15g01340 . 21 166 RAV Transcription Factor Family AT2G46870 70.1 3.7e-53 206.1
Cma08g00001 . 79 318 RAV Transcription Factor Family AT2G46870 52.2 5.4e-52 202.2
Cma04g00739 . 39 149 RAV Transcription Factor Family AT2G46870 83.9 3.5e-51 199.5
Cma16g00597 CST 28 135 RAV Transcription Factor Family AT2G46870 82.1 3.6e-48 189.5
Cma04g01521 . 179 291 RAV Transcription Factor Family AT2G46870 68.1 2.4e-39 160.2
Cma18g01042 CCT,ECH 171 283 RAV Transcription Factor Family AT2G46870 66.4 4.0e-39 159.5
Cma06g00497 CST 35 169 RAV Transcription Factor Family AT2G46870 58.6 5.2e-39 159.1
Cma14g00333 . 37 153 RAV Transcription Factor Family AT2G46870 64.2 2.2e-37 153.7
Cma04g02012 CCT,CST,ECH 172 277 RAV Transcription Factor Family AT2G46870 68.8 2.9e-37 153.3
Cma11g00470 . 45 322 RAV Transcription Factor Family AT1G50680 53.5 3.9e-80 295.8
Cma10g00479 . 87 380 RAV Transcription Factor Family AT1G50680 50.2 2.1e-78 290.0
Cma11g00827 . 52 279 RAV Transcription Factor Family AT1G50680 59.9 5.3e-77 285.4
Cma02g00959 . 23 163 RAV Transcription Factor Family AT3G61970 70.8 2.0e-51 200.3
Cma17g00554 . 74 294 RAV Transcription Factor Family AT3G61970 53.8 4.4e-51 199.1
Cma15g01340 . 29 175 RAV Transcription Factor Family AT3G61970 67.3 1.3e-50 197.6
Cma08g00001 . 77 188 RAV Transcription Factor Family AT3G61970 82.6 4.1e-49 192.6
Cma04g00739 . 31 169 RAV Transcription Factor Family AT3G61970 67.6 2.0e-48 190.3
Cma16g00597 CST 17 135 RAV Transcription Factor Family AT3G61970 74.8 1.7e-47 187.2
Cma04g01521 . 174 291 RAV Transcription Factor Family AT3G61970 67.2 6.0e-40 162.2
Cma18g01042 CCT,ECH 167 283 RAV Transcription Factor Family AT3G61970 64.4 2.5e-38 156.8
Cma04g02012 CCT,CST,ECH 165 277 RAV Transcription Factor Family AT3G61970 66.1 3.6e-37 152.9
Cma18g01042 CCT,ECH 17 335 RAV Transcription Factor Family AT1G13260 62.6 1.6e-100 363.6
Cma04g01521 . 25 324 RAV Transcription Factor Family AT1G13260 65.9 1.0e-99 360.9
Cma15g00991 CCT,CST,ECH 36 289 RAV Transcription Factor Family AT1G13260 68.1 9.1e-93 337.8
Cma04g02012 CCT,CST,ECH 40 326 RAV Transcription Factor Family AT1G13260 62.4 7.2e-90 328.2
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT1G13260 64.5 4.9e-38 156.0
Cma17g00554 . 72 184 RAV Transcription Factor Family AT1G13260 68.4 1.1e-37 154.8
Cma08g00001 . 81 189 RAV Transcription Factor Family AT1G13260 70.0 1.4e-37 154.5
Cma02g00959 . 49 176 RAV Transcription Factor Family AT1G13260 62.0 7.1e-37 152.1
Cma14g00333 . 24 154 RAV Transcription Factor Family AT1G13260 60.3 2.1e-36 150.6
Cma18g01042 CCT,ECH 19 336 RAV Transcription Factor Family AT1G68840 62.8 1.5e-106 383.6
Cma04g01521 . 1 324 RAV Transcription Factor Family AT1G68840 60.2 3.4e-103 372.5
Cma04g02012 CCT,CST,ECH 40 327 RAV Transcription Factor Family AT1G68840 61.5 3.9e-91 332.4
Cma15g00991 CCT,CST,ECH 1 302 RAV Transcription Factor Family AT1G68840 58.4 8.7e-91 331.3
Cma08g00001 . 64 189 RAV Transcription Factor Family AT1G68840 60.1 2.7e-39 160.2
Cma17g00554 . 76 184 RAV Transcription Factor Family AT1G68840 70.3 1.0e-38 158.3
Cma06g00497 CST 35 155 RAV Transcription Factor Family AT1G68840 62.8 8.6e-38 155.2
Cma16g00597 CST 20 141 RAV Transcription Factor Family AT1G68840 63.0 2.5e-37 153.7
Cma02g00959 . 48 156 RAV Transcription Factor Family AT1G68840 69.4 5.6e-37 152.5
Cma04g00739 . 40 158 RAV Transcription Factor Family AT1G68840 63.6 9.5e-37 151.8
Cma14g00333 . 37 167 RAV Transcription Factor Family AT1G68840 60.2 1.2e-36 151.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000626 3 5 4 4 3 3 5 3 3 3 3 3 6 3 3 6 3 1 4 3 3 2 3 3 3 3 2 7 4 2 103
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36658 PF02362 B3 1.10E-28 CL0405 Cma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma17g00554 Cma_Chr17 FPKM 1.685128 0.485026 0.094561 0.0 6.624993 5.895818 6.946284 0.0 0.0 0.0