Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g00657 | ATGGCTGCTCTTCTTCGAGGACTCTTTCTCTTCTCTCTCCTCCTCCCACTTTCTTCTTCTTCGATCGATAATTCCAAGAAGACCTTCATTGTGCAGGTTAACAGAGATGCCAGCAAGCCTTCCATTTTCCCAACACACAGGCACTGGTACGAGTCCTCTCTGGCCTCCATCTCTCCCAACAAGCCAACACCGTCACAACCAGATGCTTCTGGTAGCGACGGACCCATCATTCACACATATGAAACCCTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTTTGAAGTTCAGAACCTTCAAACCCTTCCCCATATCGCCGCCGTCATCCCCGAGCAGGTTCGCCATCCTCATACAACTCGTTCCCCTGAGTTTCTTGGCCTTACGACCTCTGATAGTGCAGGGTTGCTTAAAGAGTCCGACTTTGGATCTGACCTTGTAATCGGAGTTATCGATACTGGTATTTGGCCGGAGAGGCAGAGCTTCAATGACCGCGATCTGGGTCCAATTCCTTCCAAATGGAAAGGCCGGTGCTTGGAGTCTAAACACTTCCCAGCCACCTCTTGCAACCGTAAGCTTATTGGGGCTCGATTCTTCTGTAGTGGGTACGAGGCCACCAATGGAAAGATGAACGAGACCACCGAGTATCGCTCGCCGCGTGATTCCGATGGTCATGGTACTCACACGGCGTCCATTGCTGCAGGTCGTTATGTGTTTCCAGCTTCAACTTTAGGCTACGCTCGTGGTAAAGCGGCCGGAATGGCTCCTAAGGCCCGTCTTGCTGCTTATAAAGTCTGTTGGAACGCAGGCTGCTACGACTCTGACATTCTTGCAGCTTTTGATGCTGCCGTTTCCGACGGTGTGGATGTGGTATCACTCAGCGTCGGCGGTGTGGTTGTGCCGTACTATCTCGATGCCATCGCTATTGGGGCTTTTAGAGCGGTGGCAGCCGGTGTTTTTGTCTCGGCATCAGCCGGTAACGGTGGCCCAGGTGGGCTCACTGTGACTAACGTAGCACCATGGGTTACAACAGTAGGAGCTGGAACCATGGATAGAGATTTTCCTGCTGATGTTAAGCTGGGAAACGGGAGGGTTATACTAGGTACTAGTGTCTACGGCGGACCTGCTTTGGTTCCTGGTCGTATGCATCCTCTAATTTATGCAGGAACCGAAGGCGGTGATGGGTATTCTTCGTCTCTATGCTTAGAAGGCTCATTGAACCCAAATCTAGTGAAAGGGAAGATTGTAGTATGTGATAGGGGCATAAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAAAAGGCTGGAGGATTAGGAATGATTTTAGCAAATGGGGTCTTTGACGGTGAGGGTTTGGTAGCTGACTGCCATGTTCTACCCGCCACTGCCGTCGGTGCAGCCGGCGGCGACGAGATCCGCAAATATATTGCAGAAGCAGCGAAGTCTAAGTCACCGCCAACAGCTACAATTTTGTTCAAGGGAACTCGGCTTGGAGTCAGGCCAGCACCGGTTGTTGCTTCATTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTGAAGCCTGATGTGATTGCGCCAGGATTGAACATTCTTGCCGCTTGGCCTGATAAAATTGGGCCCTCTGGAATTCCCACAGACAAGCGTACCACAGAGTTCAACATACTTTCCGGCACTTCCATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCTCTGCTTAAAGCGGCACACCCAGGGTGGAGTCCAGCCGCTATAAAATCAGCCCTAATGACTACAGCTTATACCTTGGACAACAGGGGTGAGACAATGTTAGACGAATCTTCAGGCAATACTTCTACGGTCTTAGACTTTGGAGCTGGTCATGTTCACCCACAAAAGGCAATGGACCCTGGCTTAATCTATGACCTGAACACATATGATTATGTAGATTTCTTGTGTAACGCCAACTACACCACTAAGAACATCCAAGTTATTACGGGGAAGATTGCAGATTGCAGCGGCGCAAAAAGGGCTGGGCATACTGGGAATTTGAACTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGTAAACATAAGATGTCTACGCATTTCATTAGAAGTGTGACCAACGTTGGGGACGCTAATTCTATCTACAAGGTAACAATCAAGCCACCAAGAGGAATTTCAGTGACTGTGGAGCCAGAAAAGCTGGCGTTTAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTCCAAGCAATGGCTTTAAGACTTTCCTCTGGAAGCTCTAGCATGAAGAGTGGTTCCATAGTTTGGACTGATGGAAAGCACGTAGTTACTAGTCCTTTGGTTGTCACCATGCAGCAACCCCTGCAGTAG | 2364 | 49.62 | MAALLRGLFLFSLLLPLSSSSIDNSKKTFIVQVNRDASKPSIFPTHRHWYESSLASISPNKPTPSQPDASGSDGPIIHTYETLFHGFSAKLSPFEVQNLQTLPHIAAVIPEQVRHPHTTRSPEFLGLTTSDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGRCLESKHFPATSCNRKLIGARFFCSGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVAAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALVPGRMHPLIYAGTEGGDGYSSSLCLEGSLNPNLVKGKIVVCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGAAGGDEIRKYIAEAAKSKSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRTTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNANYTTKNIQVITGKIADCSGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRSVTNVGDANSIYKVTIKPPRGISVTVEPEKLAFRRVGQKLSFLVRVQAMALRLSSGSSSMKSGSIVWTDGKHVVTSPLVVTMQQPLQ | 787 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 5523236 | 5525599 | + | CmaCh17G006570.1 | Cma17g00657 | 312552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g00657 | 787 | Pfam | PA domain | 383 | 471 | IPR003137 | - | |
Cma17g00657 | 787 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 558 | 568 | IPR023828 | - | |
Cma17g00657 | 787 | Pfam | Fibronectin type-III domain | 676 | 780 | IPR041469 | - | |
Cma17g00657 | 787 | CDD | PA_subtilisin_like | 356 | 489 | - | - | |
Cma17g00657 | 787 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 121 | 628 | - | - | |
Cma17g00657 | 787 | Gene3D | - | 350 | 497 | - | - | |
Cma17g00657 | 787 | PRINTS | Subtilisin serine protease family (S8) signature | 142 | 161 | IPR015500 | - | |
Cma17g00657 | 787 | PRINTS | Subtilisin serine protease family (S8) signature | 220 | 233 | IPR015500 | - | |
Cma17g00657 | 787 | PRINTS | Subtilisin serine protease family (S8) signature | 557 | 573 | IPR015500 | - | |
Cma17g00657 | 787 | CDD | Peptidases_S8_3 | 115 | 594 | IPR034197 | - | |
Cma17g00657 | 787 | Pfam | Subtilase family | 142 | 609 | IPR000209 | GO:0006508|GO:0008236 | |
Cma17g00657 | 787 | Pfam | Peptidase inhibitor I9 | 28 | 115 | IPR010259 | - | |
Cma17g00657 | 787 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 16 | 117 | IPR037045 | - | |
Cma17g00657 | 787 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.5 | 8 | 786 | - | - | |
Cma17g00657 | 787 | SUPERFAMILY | Subtilisin-like | 116 | 632 | IPR036852 | GO:0004252|GO:0006508 | |
Cma17g00657 | 787 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED | 8 | 786 | - | - | |
Cma17g00657 | 787 | Gene3D | - | 645 | 783 | - | - | |
Cma17g00657 | 787 | Gene3D | Peptidase S8/S53 domain | 144 | 641 | IPR036852 | GO:0004252|GO:0006508 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma08g00827 | Cma17g00657 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g00140 | Cma-Chr5:625072 | Cma17g00657 | Cma-Chr17:5523236 | 5.67E-175 | dispersed | |
Cma17g00657 | Cma-Chr17:5523236 | Cma20g00757 | Cma-Chr20:3568839 | 0 | dispersed | |
Cma17g00657 | Cma-Chr17:5523236 | Cma08g00827 | Cma-Chr8:5012638 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g00657 | - | - | csv:101210434 | 1375.53 |