Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g00681 | ATGGCGAATTTCCATCGATGTTCTTCTGTTTTCTTCTTCTTCTTCCTCTGTTTTCTCCCTGTAATTTTCTCTCGATCGCCGGATAAACAAGAGACTTTCATCGTTCACGTCTCTAAATCGGAGAAGCCTTCTCTGTTCTCCTCTCATTATCGCTGGCACTCCTCAATTCTTGATTCACTCTCTCCTTCTTCTCGTCCGAGGAAGCTTCTTTACAACTACGAACGTGCCGTTAATGGTTTCGCTGCACGCATCACGGCTGATCAGGCGGCGGAGTTGCGTCGTGTTCCAGGTGTTGTTTTGGTGATTCCGGATCGGATGCGTCAGCTTCATACGACTCGGACGCCTCATTTTTTAGGTCTGGCGGATAACCTAGGGCTATGGCCTGACACTAATTATGCGGATGATGTGATTATTGGCGTTCTTGATACCGGAATTTGGCCGGAGCATCCGAGTTTCTCTGATGAGGGTTTGTCTCCGGTGCCGGCAAGTTGGAAAGGAACCTGCGAGGCTGGGGAGGGATTTTCGGCTACCACCTGTAATCGGAAGATTATTGGTGCGAGAGCGTTCTTTCACGGATACGAATCTAATATAGGAAGACGGCTTCACGGTTTGTCCGATTTCAAATCTGCTAGGGATTCGGACGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAGAATGCTAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGCATGGCGAGCAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGATGTTACGATTCTGACATCCTCGCCGCTATGGATCAGGCGATTGCCGATGGAGTCCACATTATCTCTCTCTCAGTCGGATCCTCGGGCCGTGCCCCTGCGTACTATAGAGATTCTATCGCAATTGGAGCGTTTGGTGCGATGCAGCACGGCATTGTCGTCTCTTGCTCCGCCGGAAACTCCGGTCCCGGTCCTTACACGGCTGTGAATATCGCTCCATGGATCCTCACTGTTGGTGCATCCACAATTGACAGGGAGTTTCTTGCCGATGTGATTCTTGGAGACGGTAGGGTTTTTAGCGGCGTGTCGCTCTACTCCGGAGATCCTCTTGGCGATTCCAAGCTTCCGCTGGTCTACGGTGGAGATTGCGGTAATAGGTATTGTTATTCTGGATCCCTCGATCCGTCAAAAGTTGCTGGGAAAATTGTCGTGTGCGATCGAGGAGGGAACGCCAGAGTCGCCAAAGGAAGCGCCGTGAAATCCGCCGGCGGTCTTGGTGTGATACTCGCCAACACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCGGGAACAATGATTGGAGAAATCGCCGGTAACAAGCTTCGAGACTACATCCATTCGGATCCGAATCCATCTGCTACAATCGTGTTTCGAGGAACTGTTATTGGCGATTCGCCGCCGGCTCCGAGAGTCGCCGCCTTCTCCAGCCGTGGTCCGAACTACCGAACGGCGGAGATTCTGAAACCGGACGTTATAGCTCCAGGAGTTAACATTTTGGCTGGCTGGAGCGGGTACAACAGTCCGTCTAGTCTAAGCATCGATACTCGAAGAGTTGAGTTCAATATCATCTCTGGAACTTCAATGTCCTGCCCTCACGTCAGCGGCGTCGCTGCATTGCTCCGGAAGGCTTTTCCGACATGGACACCGGCAGCAATCAAATCTGCTCTGATCACCACTTCTTACTCCTTGGACACTTCCGGCAGCCCAATCAAAGATCTCTCCACCAGCAACGACTCAAATCCGTTCGTCCATGGCGGCGGCCATATCGATCCCAACAAAGCTCTGAATCCAGGCCTGATTTATGATCTCAATCCTCATGACTACGTTTCATTTCTCTGTTCAATCGGTTACGATTCTAGACAAATAGCTGTTTTCGTGAAGGATTCTTCATACTCTAACCTATGTGAACACAAATTGAGCAATCCCGGAAATCTGAACTACCCATCATTCGCGGTCGTGTTCACTTCCAACGGCGAGGAGGTGGTGAAGTATACAAGAACTGTCACAAATGTAGGAGATGAAGCCGATGCTGTTTATGAAGTGAAAGTAGAAGCCCCACAAGGCGTTGAAATCAGTGTTCTTCCAAACAAACTGGAGTTCAGCGCAAAGAAGACAACAGAGTCTTATGAAATTACATTCACCAAAATCAGTGGATTCAAGAACTCAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGTCACATCGTTAGGAGTCCAATTGCTGTCTCGTTCAACACTGCATCCATAGCTTCGATGTAA | 2316 | 49.74 | MANFHRCSSVFFFFFLCFLPVIFSRSPDKQETFIVHVSKSEKPSLFSSHYRWHSSILDSLSPSSRPRKLLYNYERAVNGFAARITADQAAELRRVPGVVLVIPDRMRQLHTTRTPHFLGLADNLGLWPDTNYADDVIIGVLDTGIWPEHPSFSDEGLSPVPASWKGTCEAGEGFSATTCNRKIIGARAFFHGYESNIGRRLHGLSDFKSARDSDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCYDSDILAAMDQAIADGVHIISLSVGSSGRAPAYYRDSIAIGAFGAMQHGIVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGDPLGDSKLPLVYGGDCGNRYCYSGSLDPSKVAGKIVVCDRGGNARVAKGSAVKSAGGLGVILANTEENGEELLADSHLIPGTMIGEIAGNKLRDYIHSDPNPSATIVFRGTVIGDSPPAPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYNSPSSLSIDTRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWTPAAIKSALITTSYSLDTSGSPIKDLSTSNDSNPFVHGGGHIDPNKALNPGLIYDLNPHDYVSFLCSIGYDSRQIAVFVKDSSYSNLCEHKLSNPGNLNYPSFAVVFTSNGEEVVKYTRTVTNVGDEADAVYEVKVEAPQGVEISVLPNKLEFSAKKTTESYEITFTKISGFKNSASFGSIQWSDGSHIVRSPIAVSFNTASIASM | 771 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 5701933 | 5704248 | + | CmaCh17G006810.1 | Cma17g00681 | 312576 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g00681 | 771 | Pfam | Subtilase family | 134 | 582 | IPR000209 | GO:0006508|GO:0008236 | |
Cma17g00681 | 771 | CDD | Peptidases_S8_3 | 108 | 579 | IPR034197 | - | |
Cma17g00681 | 771 | SUPERFAMILY | Subtilisin-like | 109 | 617 | IPR036852 | GO:0004252|GO:0006508 | |
Cma17g00681 | 771 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 543 | 553 | IPR023828 | - | |
Cma17g00681 | 771 | Gene3D | - | 630 | 764 | - | - | |
Cma17g00681 | 771 | Gene3D | Peptidase S8/S53 domain | 135 | 626 | IPR036852 | GO:0004252|GO:0006508 | |
Cma17g00681 | 771 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 138 | 149 | IPR023827 | - | |
Cma17g00681 | 771 | SUPERFAMILY | PA domain | 364 | 465 | IPR046450 | - | |
Cma17g00681 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
Cma17g00681 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 212 | 225 | IPR015500 | - | |
Cma17g00681 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 542 | 558 | IPR015500 | - | |
Cma17g00681 | 771 | Coils | Coil | 766 | 771 | - | - | |
Cma17g00681 | 771 | Pfam | PA domain | 375 | 459 | IPR003137 | - | |
Cma17g00681 | 771 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 110 | IPR037045 | - | |
Cma17g00681 | 771 | Gene3D | - | 344 | 480 | - | - | |
Cma17g00681 | 771 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.6 | 20 | 765 | - | - | |
Cma17g00681 | 771 | Pfam | Peptidase inhibitor I9 | 32 | 110 | IPR010259 | - | |
Cma17g00681 | 771 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 20 | 765 | IPR045051 | - | |
Cma17g00681 | 771 | Pfam | Fibronectin type-III domain | 662 | 761 | IPR041469 | - | |
Cma17g00681 | 771 | CDD | PA_subtilisin_like | 350 | 473 | - | - | |
Cma17g00681 | 771 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 108 | 613 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma08g00804 | Cma17g00681 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma17g00681 | Cma-Chr17:5701933 | Cma20g00757 | Cma-Chr20:3568839 | 0 | dispersed | |
Cma10g00769 | Cma-Chr10:3535963 | Cma17g00681 | Cma-Chr17:5701933 | 0 | wgd | |
Cma11g00735 | Cma-Chr11:3596817 | Cma17g00681 | Cma-Chr17:5701933 | 0 | wgd | |
Cma17g00681 | Cma-Chr17:5701933 | Cma08g00804 | Cma-Chr8:4855511 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g00681 | - | - | csv:101205194 | 1331.24 |