Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g00711 | ATGGCGGACCATTCTTCCAAGCGCGATACTGATTCAGGGTTCGATCATGGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCTTATCGAAATTTCCAGCTTCCAACCTCCCCGGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACGGGTTGCGGTTACCTCGCTGGTGCAGTCGCCGGCGCGTCTACGGGCTTCGTCTCCGGCGTCAAGTCTTTTGAATCAGGGGATACGATGAAACTACGGATCAATCGGATTCTGAACTCGTCTGGTCATTTAGGGCGTCTTTGGGGGAATCGTCTCGGCGTGATTGGGCTGCTATATGCTGGTTTGGAGAGCGGGTTTGAAGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCTGCGGGACTTGGCACCGGTGCGCTTTATCGCGCAGCAAGAGGGGTGAGATCGGCGGCAGTGGCCGGCGCTATTGGCGGCGTCGTGGTTGGTATGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTACGTGCCGATATGA | 573 | 55.85 | MADHSSKRDTDSGFDHGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVAGASTGFVSGVKSFESGDTMKLRINRILNSSGHLGRLWGNRLGVIGLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTGKQMLKRYVPI | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 5874218 | 5874790 | + | CmaCh17G007110.1 | Cma17g00711 | 312606 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g00711 | 190 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 64 | 173 | - | - | |
Cma17g00711 | 190 | PANTHER | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE | 16 | 190 | - | - | |
Cma17g00711 | 190 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cma17g00711 | 190 | PANTHER | TIM23 | 16 | 190 | IPR045238 | GO:0022857 | |
Cma17g00711 | 190 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g01008 | Cma-Chr10:5260986 | Cma17g00711 | Cma-Chr17:5874218 | 2.97E-71 | transposed | |
Cma11g00986 | Cma-Chr11:5246207 | Cma17g00711 | Cma-Chr17:5874218 | 9.37E-72 | transposed | |
Cma17g00711 | Cma-Chr17:5874218 | Cma08g00784 | Cma-Chr8:4723282 | 3.28E-118 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g00711 | K17794 | - | csv:101221925 | 339.732 |