Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g00711 ATGGCGGACCATTCTTCCAAGCGCGATACTGATTCAGGGTTCGATCATGGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCTTATCGAAATTTCCAGCTTCCAACCTCCCCGGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACGGGTTGCGGTTACCTCGCTGGTGCAGTCGCCGGCGCGTCTACGGGCTTCGTCTCCGGCGTCAAGTCTTTTGAATCAGGGGATACGATGAAACTACGGATCAATCGGATTCTGAACTCGTCTGGTCATTTAGGGCGTCTTTGGGGGAATCGTCTCGGCGTGATTGGGCTGCTATATGCTGGTTTGGAGAGCGGGTTTGAAGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCTGCGGGACTTGGCACCGGTGCGCTTTATCGCGCAGCAAGAGGGGTGAGATCGGCGGCAGTGGCCGGCGCTATTGGCGGCGTCGTGGTTGGTATGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTACGTGCCGATATGA 573 55.85 MADHSSKRDTDSGFDHGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVAGASTGFVSGVKSFESGDTMKLRINRILNSSGHLGRLWGNRLGVIGLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTGKQMLKRYVPI 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 5874218 5874790 + CmaCh17G007110.1 Cma17g00711 312606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g00711 190 Pfam Tim17/Tim22/Tim23/Pmp24 family 64 173 - -
Cma17g00711 190 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 16 190 - -
Cma17g00711 190 MobiDBLite consensus disorder prediction 1 25 - -
Cma17g00711 190 PANTHER TIM23 16 190 IPR045238 GO:0022857
Cma17g00711 190 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g01008 Cma-Chr10:5260986 Cma17g00711 Cma-Chr17:5874218 2.97E-71 transposed
Cma11g00986 Cma-Chr11:5246207 Cma17g00711 Cma-Chr17:5874218 9.37E-72 transposed
Cma17g00711 Cma-Chr17:5874218 Cma08g00784 Cma-Chr8:4723282 3.28E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g00711 K17794 - csv:101221925 339.732