Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g00834 ATGGAGGAGCCATCTCCCGACCAATCTGCCACCGTTAACAGGTGGTTCCGCCGTCTTCCGGCGACCCTCAGCCCCAAAAATTCCGTCCTTGCAGAAATATCAGGTGCAGTCGGCGACCTCGGGACTTACATCCCCATCGTTCTCACTCTCACTCTGGTCTCCCATCTCGATCTCGGGACAACTCTTATCTTTACCGCTCTTTACAATATCGTTACCGGCCTCCTCTTCGGCATTCCGATGCCGGTTCAACCGATGAAATCCATCGCCGCCGTCGCCGTCGCTGAGTCTACTCATCTCACTCTCCCTCAAATTGCCGCCGCGGGCCTTTCCACAGCTGCTGTCCTCCTAATACTCGGCGCCACCGGCCTCATGTCCGTTCTCTATCGATACCTCCCGCTGCCGGTCGTCCGCGGTATTCAGCTCTCTCAGGGCCTTTCCTTCGCCTTCACTGCTATTAAATACATTCGGTATGATCAAGATTTGGTCACCTCTAAATCCGGTGGATCTCGGTCCTGGCTTGGATATGACGGCCTATTAGTTGCCCTAATTTCTTGTTTGTTTCTAATTTTGACCACCGGAGCTGGCGATTCTCATAATGGAGAACCGTCGTCTTCCGAATCGCATAATGGTTCTGAATCTCGTTCTGGCCGTCGCACGAGAAGGTTACGAATGCTATCTATGATTCCTGCTGCTCTGATTGTGTTCTTGTTTGGATTATTGATCTGTTTTCTTCGCGATCTTTCCGTTTTGAAATACCTTAAATTCGGCCCTTCGAAATTGCATCTTCTGAGAATCACATGGGAAGATTGGAAAATAGGGTTTGTAAGAGCTGCAATTCCCCAAATTCCTCTTTCGATTTTGAACTCTGTAATTGCAGTTTGCAAATTGTCAGGGGATTTGTTTCCAGATCGTGAAGCTTCCGCCATGAGTGTGTCCATAAGTGTTGGGATAATGAACTTCGTCGGATGCTGGTTCGGCGCAATGCCGGTCTGTCACGGCGCAGGTGGCCTCGCCGGGCAGTATCGGTTCGGCGGCAGAAGTGGCGCATCGGTGGTGTTTTTAGGGATTGGGAAACTGATTTTGGGATTGGCGTTTGGGAATTCGTTTGCACAGGTTTTGAGTGAGTTCCCAATTGGGGTTCTTGGGGTGCTTCTTCTATTTGCAGGGATTGAATTGGCTATGGCTTCCAAAGATATGAACAGTAAAGAAGAATCATTTGTTATGTTAGTTTGTGCTGCTGTTTCACTCACAGGGTCAAGTGCTGCGTTGGGTTTTGGCGTTGGGATTGTGCTGTTTCTGCTTCTGAAACTGAGAGAATTCGACTGTTCTTCCTGTTCTTGCTTTGGGTTTCACAAGATGAAGCCCGAATCTGATGCTGAAGAAGAAGAACAACAACAAGGAACCCTCTTATTGAACTCATCTAATTTGTCAAAATTAATTACCATTTTCTTCTTAATAAAAGAACGACCACGTCGGACTCCTCGTCCACCGGCGACCGAGAAGATTACTGTCGCACTCATCCACTACTATGGTAGTCCACGCGCTACGAGGAGGAGTGGGGAAAATAAAAGAAATACAGTAGTTCGCAACCACCTATTCAGAACGACTAGAAAATTCGGAGTAGACTTCAGCTCCAAGATCCATACTTCAGTCAAGCCCGTTTCTCTCTGTCTCTCACACAGCCCGATCGCTTGCTTCCGCCATGGTTTTCCCATCTTTTTAGCGCAGAAGATCAAGTTATCCTTCGTAGAACAGAGACAGGGGATCGATCCCGACAGACACCAAGATGCCCTAGGATTTGCGGTTGTTGAATCTGAAACTAAAGATGAAATTCCTAATGAAACTTATAATTATGAAAGGCATGATGAGGTGGAGAAACAATGCAAATTTGTTCTGTCAGCTGCAGCTGAATTCAGCTCGGATACTACTAGGTTTACTAGAATGAAGGAACAGCTTCAGTTTATAAATGGAGATTGGTGGCAAGATGAGGGAAAGTATCCTATAATGCCTTATGAAAATCTAACTCTTTCAGAAAGGGACTTTATAAATGTTGAGAGCCCTTTGAAATTGATATCCTTTTGGGTTACTGATATTGATCCTGCCCATCAAACCAAGAAGTCTGTCAGTGTTAGTGGGTTAGTGTCAATGGGCATAGCTTTGGATCGTGCTTTTGACCAAAGGTCATATGGACATCCTCATTTTCAGTTTTGGCCTGGCTATTCTGAGCTCACACTGCCTTTGCAAGGAATCTATACTGAATCCAAGAAGAATGGTGGGGAAAGAGTGCTGTGTTTGTTGGGTAGTGGGATGTTACCTTCTCGTGATCAAGAGTCCGATAATCCCTGGAGTTGGGTCAAGGATTCAAATGGGAATCCTCACCAGATGCCACTTCTTCAAGACGATCAAATTCTACTTGTTTTGCGATATCCGATGAGGTATACGTTGACAAGTAGAGTAATCCTAGGTGAATTGAGAAGTTTGAACCCCAAGTCGAACTCTAAGTACTTCGACGACGTTCACATTTCGTCTCAACTCGATGATGTGAACTATGATTTCGCAGCTGAGAAAGTTGTCAAAAAAGCGTGTTCTCCGTACCCTTACAATGATGACTTTTTGAAGAAGAACATTAGTACGTATCGAGGTTCTTTTTGCAGGGTTTTGCAAGAAATGACAAGGGGACAAGCTTTCACAATCCTCCCAAACTGGAGATGCAACTCTACAGATGAATTTTGTAGGAAACTTGGTCCGTTTCTATCAGATAAAGAGATCAATGGTACCGACGGAGGTTTCAAAGATGTGAGCCTTTATATGCAGGACGTGAAATGCAAGCTGCGGGGCTCTAGCCATAACGACATATCTGCTAGCGTTTCTGCTGTCTTTCGGGCTGTTTTGCCATCGGAGAATATCTACACTGCTTGGAGAAGAACTGCACTTAATAACATGACAATGGTGTCTGAGGGAATGTGGAAGTCTTCCAGTGGGCAGCTTTGCATGGTTGGTTGCGTTGGGCTTGTTAATATCGATAAGAGCTCCTGTGACTCTAGGATCTGCCTGTATCTTCCGACCTCGTTTACTTTAAAACAACGAAGCATTCTTGTCGGTTCAATTTCGAGCACGAATGATAACCCAACGTACTACCCTTTGTCATTTGAAAAGTTATTAAGGCCTACAGAGTTGTGGAGTTATTTTAGGGAGTCCCATCCATTTTACAGTTACACAAAGATTGCTTCAGCTGGTGCCGTGCTCGAGAAAAACGAGCCTTTCAGTTTTCAGGCTGTCGTAAAGAAGTCATTGCTGCATTATCCCAAACTGGAAGACACCGAAACGTTCAAACTCAGTGAGTCTCTTCTCTTAGAAGATCTCACCCTTCATGTCCCTGCAGTTCCCATTCCAGCTCTTGGTTCTCAAGCTTCGAGAACGGATGTTCAGATGGATATTATCTCTGTTGGTTCCTTTTTCGGACGGGATTGGTCGAGGTTAAATGGATCCATCTCGGACATGGAAACTCCTTATCATGTTAAGCCTGAATACACTGAAAAGCAGCTGCTTGTGAATGTATCTGCACTACTCTCACTTTCAGGACAGACATATAGCAACTTTTCTGCACTTTTTGTGGAGGGTATTTACGATCCACATGTTGGACATATGTATCTAGTTGGTTGCAGAGATGTTCGTGCATCGTGGAACGTTTTGCTCGAGAGCATGGATCTTGAAGATGGCTTGGATTGTCAAATTGAAGTAGTTGTGTCATATCCTCCCACTACAGCTCAGTGGTTAATCAATCCAACTGCACAGGTCTCCATTTCCAGCCAACGAACAGAAGACGACCCTTTATATTTCAGCTCAATAAAACTCGAGACGATGCCGATCATGTATAGGAGGCAGCGACAAGATATCCTTTCTCGTAAGAGTGTCGAGGGTATACTCCGAATATTGACACTTTCACTAGCGATCGCTTGCATCACAAGTCAGATATTTTATATAAATCATAATCTCGAGTCTGTTCCATTCATATCTCTTGTTACACTGGGAGTTCAAGCCCTTTGTTATACTCTTCCACTGGTCACTGGTGCTGAAGCTCTCTTCAAACGACGCGATTCTGAATCATATGAGGAGTCGTATAATCTCGAAAATAATCTTTGGTTTGTCGTGATGGATTATGTCGTCAAGCTTCAAGTTGTAACCTCACTTCTATTGACTTTGAGACTTTGCCAGAAGGTTTGGAAATCTCGGATCAAGTTACTACGACAAGCTCCTCTCGAACCACATCGTGTCCCCAGTGATAAGTGGGTGCTTATTACTACCTTCTTTATACATCTTGTCGGGTATGTAGTTGTTGTCGTGGTTCATGCTTCAAGGACAACCAAAACCCGGGTCGAGAGTTTCTTGATATCTAACAGAGCTTCAAGTTCCCACATGATGCAGGGATGGGAAAGGGACTTACAAGAGTATGTGGGTCTTGTTCAAGATTTTTGCTTACTCCCTCAAATCATTGGCAATTTCTTATGGCAAATTGATTGCAAACCTCTTAGGAAGTGTTATTTCATTGGAATCACTCTGGTTAGACTTCTTCCACACATTTATGACTTAATTAGAGCTCCTTCTGTAAATCCTTACTTTGTTCAAGAGTATGAGTTTGTGAACCCAAGCATGGACTTCTACTCTAGATTTGGAGATGTTGCCATTCCTTCGATCGCATTGATCCTTGCAGTCGTCGTCTACGTTCAGCAACGATGGAGCTATGAGAAACTAAGCAACAGTCTCGTGGTCGGGCGGATTAGGCTTCTTCCAAGCGCTTCTAGAAAGTATCAGAGGTTGCCTTCCAAGTCATATGAAGCTGAGCTTGCTTCTGCTGAAAATGGTAACGCCGAACGGGAAGATGTAGAATGA 4890 44.7 MEEPSPDQSATVNRWFRRLPATLSPKNSVLAEISGAVGDLGTYIPIVLTLTLVSHLDLGTTLIFTALYNIVTGLLFGIPMPVQPMKSIAAVAVAESTHLTLPQIAAAGLSTAAVLLILGATGLMSVLYRYLPLPVVRGIQLSQGLSFAFTAIKYIRYDQDLVTSKSGGSRSWLGYDGLLVALISCLFLILTTGAGDSHNGEPSSSESHNGSESRSGRRTRRLRMLSMIPAALIVFLFGLLICFLRDLSVLKYLKFGPSKLHLLRITWEDWKIGFVRAAIPQIPLSILNSVIAVCKLSGDLFPDREASAMSVSISVGIMNFVGCWFGAMPVCHGAGGLAGQYRFGGRSGASVVFLGIGKLILGLAFGNSFAQVLSEFPIGVLGVLLLFAGIELAMASKDMNSKEESFVMLVCAAVSLTGSSAALGFGVGIVLFLLLKLREFDCSSCSCFGFHKMKPESDAEEEEQQQGTLLLNSSNLSKLITIFFLIKERPRRTPRPPATEKITVALIHYYGSPRATRRSGENKRNTVVRNHLFRTTRKFGVDFSSKIHTSVKPVSLCLSHSPIACFRHGFPIFLAQKIKLSFVEQRQGIDPDRHQDALGFAVVESETKDEIPNETYNYERHDEVEKQCKFVLSAAAEFSSDTTRFTRMKEQLQFINGDWWQDEGKYPIMPYENLTLSERDFINVESPLKLISFWVTDIDPAHQTKKSVSVSGLVSMGIALDRAFDQRSYGHPHFQFWPGYSELTLPLQGIYTESKKNGGERVLCLLGSGMLPSRDQESDNPWSWVKDSNGNPHQMPLLQDDQILLVLRYPMRYTLTSRVILGELRSLNPKSNSKYFDDVHISSQLDDVNYDFAAEKVVKKACSPYPYNDDFLKKNISTYRGSFCRVLQEMTRGQAFTILPNWRCNSTDEFCRKLGPFLSDKEINGTDGGFKDVSLYMQDVKCKLRGSSHNDISASVSAVFRAVLPSENIYTAWRRTALNNMTMVSEGMWKSSSGQLCMVGCVGLVNIDKSSCDSRICLYLPTSFTLKQRSILVGSISSTNDNPTYYPLSFEKLLRPTELWSYFRESHPFYSYTKIASAGAVLEKNEPFSFQAVVKKSLLHYPKLEDTETFKLSESLLLEDLTLHVPAVPIPALGSQASRTDVQMDIISVGSFFGRDWSRLNGSISDMETPYHVKPEYTEKQLLVNVSALLSLSGQTYSNFSALFVEGIYDPHVGHMYLVGCRDVRASWNVLLESMDLEDGLDCQIEVVVSYPPTTAQWLINPTAQVSISSQRTEDDPLYFSSIKLETMPIMYRRQRQDILSRKSVEGILRILTLSLAIACITSQIFYINHNLESVPFISLVTLGVQALCYTLPLVTGAEALFKRRDSESYEESYNLENNLWFVVMDYVVKLQVVTSLLLTLRLCQKVWKSRIKLLRQAPLEPHRVPSDKWVLITTFFIHLVGYVVVVVVHASRTTKTRVESFLISNRASSSHMMQGWERDLQEYVGLVQDFCLLPQIIGNFLWQIDCKPLRKCYFIGITLVRLLPHIYDLIRAPSVNPYFVQEYEFVNPSMDFYSRFGDVAIPSIALILAVVVYVQQRWSYEKLSNSLVVGRIRLLPSASRKYQRLPSKSYEAELASAENGNAEREDVE 1629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 6538218 6544272 - CmaCh17G008340.1 Cma17g00834 312729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g00834 1629 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 603 1616 IPR021319 -
Cma17g00834 1629 Pfam Molybdate transporter of MFS superfamily 274 392 IPR031563 GO:0015098|GO:0015689
Cma17g00834 1629 Pfam Molybdate transporter of MFS superfamily 31 147 IPR031563 GO:0015098|GO:0015689
Cma17g00834 1629 MobiDBLite consensus disorder prediction 1605 1629 - -
Cma17g00834 1629 Pfam Protein of unknown function (DUF2921) 626 1585 IPR021319 -
Cma17g00834 1629 PANTHER PII, URIDYLYLTRANSFERASE (DUF2921) 603 1616 - -
Cma17g00834 1629 MobiDBLite consensus disorder prediction 197 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g00301 Cma-Chr12:1537773 Cma17g00834 Cma-Chr17:6538218 2.18E-143 dispersed
Cma13g00646 Cma-Chr13:6097644 Cma17g00834 Cma-Chr17:6538218 2.80E-52 dispersed
Cma17g00834 Cma-Chr17:6538218 Cma18g00367 Cma-Chr18:1997700 3.78E-35 dispersed
Cma17g00834 Cma-Chr17:6538218 Cma08g00633 Cma-Chr8:3578243 1.14E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g00834 - - csv:101220341 1687.16