Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g00902 | ATGAATCGCCCTGAGATGGTTCCGAAAGAATGTTCGAAGCGATTGGCGGCTTGGAAAATGGGGATATATCTCAGCTCCCCCAAAACAGAAAAGGCCTCAGACGATGGTGAGAATGAAAGTCTTCGGTATGGGGTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGATTTTGACACATCAACATCTTTCTTTGGTGTTTACGATGGCCATGGAGGTAAAGCAGTTTCAAAGTTCTGTGCCAAGTATCTCCATCAACAGGTGCTCAAACATGAATCATACATGGCTGGTGATTTAGGAACTTCAGTACAGAAGGCCTTTCTTAGAATGGATGAGATGATGTGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTAGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGAGTGCGGAAGCTAACAATCAAGTGGATGATTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATCATACGAAATAACCAACTTGTGGTGGCCAATGCTGGGGATTCTCGCTGTGTCATTTCCAGAAAGGGCCAGGCATATAACCTATCTAAAGATCACAAGCCTGATCTTGAGGCAGAGAAGGACAGAATTTTGAAAGCCGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCACGGGCTATAGGTGACATGGAGTTTAAGCAGAATGAAACTATGCCTGCAGAAAAGCAGATTGTAACTGCCAATCCAGATGTAACAACTGTTGAGCTTTGCGAGGATGACGAATTTCTTGTTATTGCATGCGATGGCATCTGGGATTGTATGTCCAGCCAACAACTGGTTGATTACATTGGAGATCAACTTAAAACGGAAAGTAAACTCTCAGTCATTTGTGAGAGAGTATTTGACAGATGCTTGGCACCCTCAGTTGGTGGTGAAGGATGTGACAACATGACTATGATCTTGGTTCAATTTAAGAAGCCCATCCACAACCCAAATGCCGCTTCTACTTCTGCTGCGGAGCTGCCTTCAACGTCCAATCAACCGCCGTCTGATCCGAACGAAGGCCCTTCTAAAGCTGAATAG | 1152 | 45.4 | MNRPEMVPKECSKRLAAWKMGIYLSSPKTEKASDDGENESLRYGVSSMQGWRATMEDAHAACLDFDTSTSFFGVYDGHGGKAVSKFCAKYLHQQVLKHESYMAGDLGTSVQKAFLRMDEMMCGQRGWRELAILGDKMDKISGMIEGFIWSPKSAEANNQVDDWPPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEAEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNETMPAEKQIVTANPDVTTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVICERVFDRCLAPSVGGEGCDNMTMILVQFKKPIHNPNAASTSAAELPSTSNQPPSDPNEGPSKAE | 383 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 6820003 | 6827140 | - | CmaCh17G009020.1 | Cma17g00902 | 312797 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g00902 | 383 | MobiDBLite | consensus disorder prediction | 355 | 383 | - | - | |
Cma17g00902 | 383 | CDD | PP2Cc | 42 | 347 | IPR001932 | - | |
Cma17g00902 | 383 | MobiDBLite | consensus disorder prediction | 355 | 376 | - | - | |
Cma17g00902 | 383 | Pfam | Protein phosphatase 2C | 175 | 331 | IPR001932 | - | |
Cma17g00902 | 383 | Pfam | Protein phosphatase 2C | 42 | 121 | IPR001932 | - | |
Cma17g00902 | 383 | Gene3D | - | 19 | 348 | IPR036457 | - | |
Cma17g00902 | 383 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 17 | 360 | - | - | |
Cma17g00902 | 383 | ProSitePatterns | PPM-type phosphatase domain signature. | 71 | 79 | IPR000222 | GO:0043169 | |
Cma17g00902 | 383 | ProSiteProfiles | PPM-type phosphatase domain profile. | 42 | 347 | IPR001932 | - | |
Cma17g00902 | 383 | PANTHER | PROTEIN PHOSPHATASE 2C | 17 | 360 | IPR015655 | GO:0004722|GO:0006470 | |
Cma17g00902 | 383 | SMART | PP2C_4 | 32 | 345 | IPR001932 | - | |
Cma17g00902 | 383 | SUPERFAMILY | PP2C-like | 22 | 348 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01674 | Cma-Chr1:11423158 | Cma17g00902 | Cma-Chr17:6820003 | 0 | dispersed | |
Cma17g00902 | Cma-Chr17:6820003 | Cma09g00041 | Cma-Chr9:172537 | 3.08E-38 | dispersed | |
Cma17g00902 | Cma-Chr17:6820003 | Cma08g00588 | Cma-Chr8:3350272 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g00902 | K17499 | - | csv:101214132 | 685.256 |