Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g00985 ATGTTTTCCCATGCAATTCCATTCCTTCATCACAAACCTATTATGGATTCCGGCAACCTCTCCTCCTCCTCCGCCCTGCCTGCTGTGGTTTCCGCTGAAAACTTCAGGCTCTGGCCGCTCCTTGACGTCCAAATCTTGGAGCTCTCTTTCGCTCTTTTCGTGTTCTTGGCCATCCATGTCATTAGACAACAGCGACGATATGGCTTGTCTGTTTGGCCGATCGTTGGAATGTTACCGTCTCTGATCACAGCAGCACGTGGGAATCTCTATGAATGGATTACTGACCTCCTCCGCCGTCATAAGGGTACGTTTCAATTTCGAGGCCCGTGGTTTAGTAGTCTCAATTGTGTAGTCACTGCTGATCCCCGGAACTTGGAGCACCTTCTCAAGACCAAATTTCCTTACTACCCTAAAGGGTCATTCTTCCGCGACACGGTGAGAGACCTTCTCGGTGATGGAATATTTGGGGCCGACGACGAGACGTGGCAACGACAGAGGAAGGTGGCCAGCATTGAGTTTCACTCGGCGAGATTCCGACAGATGACGGTGGAGTCGCTGGTGGAGCTCGTGCACTCGAGGTTGGAAACGGTGTTGGAGGATTTTGTGGAACGGAGGACGGCAGTGGACCTGCAGGATGTTCTTCTGAGATTGACGTTTGACAATGTGTGTATGATTGCCTTTGGGGTGGATCCCGGCTGCTTGCGCGGCGGCTTGCCGGAGATTCCATTTGCTAAGGCCTTTGAGGATGCGACTGAAGTCACTGTTCTACGCTTCATCACACCTACGTTCGTATGGAAAATCTTGAGGTACCTGAACTTGGGAGTGGAAAAGAAGCTGAAGCAATCGATAAAAACCGTCGACGAATTTGCAGAGGACGTGATTCAAACACGGAAGAGAGAACTCTCCACGACGGCGCAACCACAAGCCAATAACCAGAGATCCGACCTATTAACCGTATTTATGAGGCTAAGAGACGAGCAAGGGCGGCCATTCTCCGACAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTCGCCGGAAGAGACACGTCTTCCGTCGCATTGAGTTGGTTCTTCTGGTTGCTCGATCAAAATCCCGACGTGGAGAACAAAATTCTAGCAGAAATTTACAGAATCGTCGGCGAACGAGGAGAGGCCAAAACCAGAGAGTTCCGATTCGATTCGTTAGTGTTCAAACCAGAGGAAATCAAGAAAATGGAGTATTTGCACGCGGCGATTTCCGAAGCCCTAAGATTATATCCATCAGTTCCAGTCGATCACAAAGAGGTCGTGGAGGACGATGTATTCCCAGACGGAACGATTCTGAAGAAAGGAACAAAAATCATCTACGCTATATACGCGATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAAAGATGGATGAAAGACGGTCGGTTCATGAGCGAATCAGCGTATCGATTCACCGCCTTCAACGGCGGTCCTCGGCTGTGTCTGGGAAGGGATTTCGCGTACTATCAAATGAAATACGTCGCCGCCTCGATCATCAGCCGGTACCGGGTGGCGGTGGTGAAGGGGCATCCGGTGGAGCCGAAGCTTGCCCTAACTTTCTATATGAAGGACGGCTTGAAGGTCAATTTGATCAAACGAGAAGAGGGGCAGATTCGGAAATACATGAAGCTAAATTGA 1689 49.73 MFSHAIPFLHHKPIMDSGNLSSSSALPAVVSAENFRLWPLLDVQILELSFALFVFLAIHVIRQQRRYGLSVWPIVGMLPSLITAARGNLYEWITDLLRRHKGTFQFRGPWFSSLNCVVTADPRNLEHLLKTKFPYYPKGSFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLETVLEDFVERRTAVDLQDVLLRLTFDNVCMIAFGVDPGCLRGGLPEIPFAKAFEDATEVTVLRFITPTFVWKILRYLNLGVEKKLKQSIKTVDEFAEDVIQTRKRELSTTAQPQANNQRSDLLTVFMRLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPDVENKILAEIYRIVGERGEAKTREFRFDSLVFKPEEIKKMEYLHAAISEALRLYPSVPVDHKEVVEDDVFPDGTILKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMKDGRFMSESAYRFTAFNGGPRLCLGRDFAYYQMKYVAASIISRYRVAVVKGHPVEPKLALTFYMKDGLKVNLIKREEGQIRKYMKLN 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7250967 7253060 + CmaCh17G009850.1 Cma17g00985 312880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g00985 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 491 500 IPR017972 GO:0005506|GO:0016705
Cma17g00985 562 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PRINTS E-class P450 group I signature 488 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PRINTS E-class P450 group I signature 498 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PANTHER CYTOCHROME P450 86B1-LIKE 33 551 - -
Cma17g00985 562 PANTHER CYTOCHROME P450 33 551 - -
Cma17g00985 562 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PRINTS P450 superfamily signature 489 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 PRINTS P450 superfamily signature 498 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 Pfam Cytochrome P450 70 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 Gene3D Cytochrome P450 67 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g00985 562 SUPERFAMILY Cytochrome P450 70 550 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00654 Cma-Chr1:3418591 Cma17g00985 Cma-Chr17:7250967 1.57E-141 dispersed
Cma03g01042 Cma-Chr3:7223154 Cma17g00985 Cma-Chr17:7250967 4.64E-110 dispersed
Cma07g00760 Cma-Chr7:3370408 Cma17g00985 Cma-Chr17:7250967 8.62E-111 dispersed
Cma17g00437 Cma-Chr17:2600115 Cma17g00985 Cma-Chr17:7250967 7.61E-149 dispersed
Cma14g00499 Cma-Chr14:2440225 Cma17g00985 Cma-Chr17:7250967 8.98E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g00985 K15402 - csv:101212202 1006.13