Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g00999 | ATGGATGATAGCTGTGCGGTGTGTGCCGATGCCCTTGAATGGGTTGCCTATGGCTCTTGCGGCCATCGGGATGTCTGCTCCACCTGCGTTGCTCGCCTTCGATTCATTTGTGGTGATCGCTGCTGTTGCATCTGCAAGTCCGAATCCACCGTCGTCTTCGTCACTAAGGCCTTAGGAGATTATACAAGGACTATTAACGACTTCACAGTCTTTCCTTCTGAACCTAGAGAAGGTCGTTGTGGATCCTATTGGTATCATGAAGACACACAAGCATTTTTTGATGACGTTGACCACTACAAGATGATAAAAGCAATGTGCAGGTTATCATGCAGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGGCTCAAAGCGCCGAGGAAGATTTCGGAATATTGAACAGCTAAAGGGTCATTTGTTTCATCGACATAAGTTGTTTATGTGCAGCCTTTGTTTGGAAGGAAGGAAGATCTTTATTTGTGAACAAAAGCTGTATAATAGAGCACAACTGAATCAGCACATACACACTGGTGACTCTGAGGTGGACGGAAGTGAGAGTGAGAGAGGTGGTTTCACCGGACACCCAATGTGTGAGTATTGCAGGACTCCTTTTTACGGAGATAATGAGCTGTATACTCATATGTCAACAGAGCATTATACATGTCATATATGCCAAAGGCTCCATCCTGGACAGTATGAATATTATAAGAATTATGATGACCTGGAGATCCATTTCCGACAAGCACATTTTCTTTGTGAAGATGAAGCCTGCCTTTCTAAGAAGTTTATAGTGTTCCAATCTGAATCAGAAATGAAGAGGCACAATACTATTGAACATGGTGGTAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAACGACCAAGATAATCGCCGTGGAAGACGAACATTTCGTCGTGATTCTTCTGACGATCTACTTTCTGTGGCCATTCAAGAAAGTTTTGAAACAGCCAATGTTGATGACACCACTCATGACCCACTACCTAGCGGACAAGTAGACTCAGATCAGGGAAATATAAGCAACATTGATCCCTTAATTGAACCATTTGAAGCCTTATCCACAACAGATTCTGAATCAGCTTCTAGATACCTTCAAGCATTGGGTCATTCTAGGAATTCCCAATTGGAGCAATCATCCTTTCCACCCCTATCAACAGCATCTAGCAGTAGCCATCCAAAACCCATTCCGGACAAAGATAATAACAGTATGGCTGCTCATCTTCGCCGCAAGAGGAATGTGACTGTAATAAATCCTGCCCAAGGTTGGCCAAAATCAAGTCGTGCGCCTGTGGTACCATCAAATAAATCATCTCAAGCTTGGCCTGCAATAAATGTCAATCATACGGCATCGAGCAGTTCTGGGCAGACTAAGGGTGCTGTGACCATCAGTAATGGCTCTTCAGGCTCTGGTTACTCAAATGCTGCTCAGATGCATGCGAAGGGTAAGACTAATTCTTCGAGTGGACCGGGTAGTAGTAGCAGTAGGATCAGCCATTCTGCTTCTGCTCCCAATCTCACCGACATGGCTTATACTGAACCCTCGGTTAATGATTTCCCTCCTGTATCTGCGGCACAGGCACGGAAGGTGCCCTCAAGTAGCCAGAGTTCGATGAACACCGAAGATGTCCAGACAGCTAACAAATCTCTAGTTGAAAAGATACGTGCTGCACTTGATTTTGACCAAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGCCAAGGTCAGATCGACCCGGAAATGTACCTAGACTGTGTGCAGCAGTTCGGTTTATCACATCTTGTGCTTGAACTGGCTAGGCTCTGTCCTGATGCTCAGAAACAGAAAGAACTTGTGGGGATCTATAATGCTAGTTTACAGCAAGAAGTGATCCAAGAAAATGGTAGGGCTCAAGATAGCATTCAAATTAAAGTTAAGGGAAAGAAGGGTAAAGGGAAGTCTATAGATGTTAAAGACAGCAGTTCAAAGGACAGTTCAAAGGACAGATTAGCAGACAGTATCTTGAGCAGTGTTCGGGAGCTGCAGTCGAGTCTCAGGCCATTGGAGGAAGATGTTGAGGTATTATCGAAGGGTGAGTACCGTGCTTTGAAAGGCAAAACGAAGATATCATCCGATGACCAGCAAAGTGGGACAGGAGGACAAAACAGACAACCGTCTACTGGACTATCGAACCACCACAGCACAGGGGATGGAGATGGTGGGGGGACCAAGCAAAGAAAGAAAACCTCCAAGTTCCATAGAGTTCGTTTAGGCGATGGTTCGGTTGCTGCACTCTTAGATTTAAAAAACTCCAACCCTGCTTCAGACTCGGACCCATCTGAAAGAGTTGAGGATGGGAACAATACCGCTGGGGCAGTGCCTGTTCGGGGTGTGTGGCGAAACGGTGCTCAGAGGCTTTTCTCCTAG | 2472 | 44.94 | MDDSCAVCADALEWVAYGSCGHRDVCSTCVARLRFICGDRCCCICKSESTVVFVTKALGDYTRTINDFTVFPSEPREGRCGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDGSKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKIFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEYCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQAHFLCEDEACLSKKFIVFQSESEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNDQDNRRGRRTFRRDSSDDLLSVAIQESFETANVDDTTHDPLPSGQVDSDQGNISNIDPLIEPFEALSTTDSESASRYLQALGHSRNSQLEQSSFPPLSTASSSSHPKPIPDKDNNSMAAHLRRKRNVTVINPAQGWPKSSRAPVVPSNKSSQAWPAINVNHTASSSSGQTKGAVTISNGSSGSGYSNAAQMHAKGKTNSSSGPGSSSSRISHSASAPNLTDMAYTEPSVNDFPPVSAAQARKVPSSSQSSMNTEDVQTANKSLVEKIRAALDFDQDRYAIFKDISAQYRQGQIDPEMYLDCVQQFGLSHLVLELARLCPDAQKQKELVGIYNASLQQEVIQENGRAQDSIQIKVKGKKGKGKSIDVKDSSSKDSSKDRLADSILSSVRELQSSLRPLEEDVEVLSKGEYRALKGKTKISSDDQQSGTGGQNRQPSTGLSNHHSTGDGDGGGTKQRKKTSKFHRVRLGDGSVAALLDLKNSNPASDSDPSERVEDGNNTAGAVPVRGVWRNGAQRLFS | 823 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7314011 | 7319316 | - | CmaCh17G009990.1 | Cma17g00999 | 312894 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 336 | 361 | - | - | |
Cma17g00999 | 823 | PANTHER | EBR1 | 1 | 821 | - | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 724 | 753 | - | - | |
Cma17g00999 | 823 | CDD | RING-HC_ZNF598 | 5 | 46 | IPR041888 | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 720 | 823 | - | - | |
Cma17g00999 | 823 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 199 | 220 | IPR013087 | - | |
Cma17g00999 | 823 | ProSiteProfiles | Zinc finger RING-type profile. | 5 | 46 | IPR001841 | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 666 | 685 | - | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 546 | 563 | - | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 433 | 563 | - | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 447 | 531 | - | - | |
Cma17g00999 | 823 | SMART | c2h2final6 | 108 | 145 | IPR013087 | - | |
Cma17g00999 | 823 | SMART | c2h2final6 | 221 | 251 | IPR013087 | - | |
Cma17g00999 | 823 | SMART | c2h2final6 | 197 | 220 | IPR013087 | - | |
Cma17g00999 | 823 | SMART | c2h2final6 | 252 | 281 | IPR013087 | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 389 | 421 | - | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 389 | 416 | - | - | |
Cma17g00999 | 823 | MobiDBLite | consensus disorder prediction | 336 | 362 | - | - | |
Cma17g00999 | 823 | PANTHER | ZINC FINGER PROTEIN 598 | 1 | 821 | IPR044288 | GO:0061630|GO:0072344 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g00999 | K22381 | - | csv:101214376 | 1356.66 |