Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g01003 | ATGAATACTTTGAGTGGAGAAGCCAAGCTTGTGAGTTTATTAATGGTGGGCATCGTAATGGCATCTAAAGCTTATTGTCAAGACTTGGAATTAGGGTTCTATCGTCAGACATGTCCTTTGGCTGAACGCATTGTGAGAGCCACAGTGGCGAAGGCTGTTCACCACAACCCTGGCATGGCTGCTGGCCTTATTCGTTTGCATTTTCATGATTGTATTGTTCTAGGATGCGATGCATCGATACTCCTCGACAAAACGCCGCAAAATCCTGATTCCGAAAAAGACAATTTCGCCAACCCATTATTACGAGGCTTCGAAGTAATCGACGACGCCAAATCCCATCTTGAATCCCTATGTCCAAACACAGTTTCTTGCGCCGACATTTTAGCCTTTGCAGCTCGAGACAGCGTCGCCATCACCGGTCAATTCACCTACGCGGTCCCTGGCGGCCGTCGCGACTCATTGGTTTCCCATGGAGCAAACGTTTCCGACAACGTGCCATTTCCGACATCCGACATTGGGTTCCTCAAACAACGATTCGAACAACGAGGCCTGTCGTTGAGAGACATGGTGGCTCTCTCAGGCGCCCACTCCATCGGCATTGCTCCTTGCAGCGCCTTCTCCGAACGCCTTTACTTTTTTAACGATACAATTAATCAAACTGATCCGTCTTTGGACCCAAAGTTTGCGGCTTTTTTGAAAACCAAGTGTCCGTTGAATAGTAGGTTGAATCAAATAACGGCGGATTTGGATAATGTGTCGCCGAACCGGTTGGATGTTCAGTTTTTTGAGAATTTGAAGAGAAAGATGGGGGTTTTGTCGTCCGATCAGGCGTTGGTGACTGACCCTTTGACGGCGGCGACGGTGAGGAGATACCTGAGGAATAGAGCGGTGTGGATGAGGGATTTCTCGAAGGCGATGGTGAAGATGGGGAAGCTGCTGGTTTTGACTGGAACTCAAGGGGAGATTAGAAGGAACTGCCATTTTAAGAACTAG | 993 | 48.34 | MNTLSGEAKLVSLLMVGIVMASKAYCQDLELGFYRQTCPLAERIVRATVAKAVHHNPGMAAGLIRLHFHDCIVLGCDASILLDKTPQNPDSEKDNFANPLLRGFEVIDDAKSHLESLCPNTVSCADILAFAARDSVAITGQFTYAVPGGRRDSLVSHGANVSDNVPFPTSDIGFLKQRFEQRGLSLRDMVALSGAHSIGIAPCSAFSERLYFFNDTINQTDPSLDPKFAAFLKTKCPLNSRLNQITADLDNVSPNRLDVQFFENLKRKMGVLSSDQALVTDPLTAATVRRYLRNRAVWMRDFSKAMVKMGKLLVLTGTQGEIRRNCHFKN | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7333465 | 7335164 | - | CmaCh17G010030.1 | Cma17g01003 | 312898 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g01003 | 330 | Gene3D | Peroxidase, domain 2 | 166 | 309 | - | - | |
Cma17g01003 | 330 | PRINTS | Haem peroxidase superfamily signature | 122 | 139 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Haem peroxidase superfamily signature | 188 | 203 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Haem peroxidase superfamily signature | 250 | 265 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Haem peroxidase superfamily signature | 60 | 74 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Haem peroxidase superfamily signature | 140 | 152 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | Gene3D | - | 32 | 330 | - | - | |
Cma17g01003 | 330 | PANTHER | PEROXIDASE 25-RELATED | 19 | 328 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 187 | 199 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 38 | 57 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 140 | 155 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 62 | 82 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 248 | 263 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 304 | 317 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 102 | 115 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 264 | 281 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PRINTS | Plant peroxidase signature | 121 | 131 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | PANTHER | PEROXIDASE | 19 | 328 | - | - | |
Cma17g01003 | 330 | ProSitePatterns | Peroxidases active site signature. | 60 | 71 | IPR019794 | GO:0004601 | |
Cma17g01003 | 330 | Pfam | Peroxidase | 45 | 293 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | ProSiteProfiles | Plant heme peroxidase family profile. | 28 | 330 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - | |
Cma17g01003 | 330 | SUPERFAMILY | Heme-dependent peroxidases | 29 | 330 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma17g01003 | 330 | CDD | secretory_peroxidase | 29 | 328 | IPR033905 | GO:0004601|GO:0042744 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma08g00491 | Cma-Chr8:2792619 | Cma17g01003 | Cma-Chr17:7333465 | 0 | dispersed | |
Cma17g01003 | Cma-Chr17:7333465 | Cma19g00264 | Cma-Chr19:1878536 | 2.03E-86 | dispersed | |
Cma17g01002 | Cma-Chr17:7327612 | Cma17g01003 | Cma-Chr17:7333465 | 4.17E-80 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g01003 | K00430 | - | csv:101216219 | 489.96 |