Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g01110 ATGGAAGCCGATCGGACGGCTGAGAACGATCACTGTCCCGATCTCCAACAGAGCTCCGGCGAGTCAAGGCCTAACCTGACTGAAACGAATCTCCGACGACACGATTCATTGGACTTCGAATCCCGCTCTGTCAAGGCGGCGGGGAAGGCGGCGGCGAGCTGGGGAGTGATACTTCAACTGGCGTTTCAGAGCGTGGGGATTGTGTACGGAGATATCGGAACGTCGCCGTTGTACGTATATGCGAGCACGTTCAGTGAGGGAATCAAGCATAACGACGACGTTTTGGGTGTGCTGTCTTTGATTCTCTACACGCTTACCTTAATCCCTTTGGTTAAGTACGTCTTCTTGGTCTTACAGGCCAATGATAACGGCGAAGGTGGCACGTTTGCATTATACTCTTTACTATGCCGATACGCGAAAATTGGACTGATACCAAGCGAGCAAGTGGAAGATCAAGAGGTATCGAATTTTCAGGTGGAGCTACCGACCAACCGCCTCAAAATGGCGTCTTGCCTGAAGTCCAAGCTCGAGAACAGCCGCGCCGCCAAGGTTTTCTTGCTTTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACAGCGTCCTCACTCCTTCCATCTCCGTTTTGTCGGCCGTGGGAGGAATTAAGAACGCTACCTCGACTATGACCCAAGAGAAAATAGTGTGGATATCAGCAGCAATCTTGGTTTGCCTGTTCATGGTGCAAAGATTTGGAACCCATAAAGTTGGATACTCCTTTGCTCCCATTATTTGCACTTGGTTTGTACTTATTGGTGCCATTGGCTTCTACAATTTCTTGAAATTTGACCCTTCTGTCATCAAAGCTGTTAATCCTATATACATTTATTACTACTTCAAACGAAACAAAAGGGACGCTTGGATCTCTCTCGGCGGTGCCGTTCTTTCCATTACCGGGACTGAGGCTCTGTTTGCGGACCTGGGGCACTTTAGTGTGATGTCTATAAGACTGAGCATGTGTTGCGTGGCTTACCCTGCCCTTGTCTCTGCGTACGTTGGCCAAGCCTCCTTTCTCCGTGAGCATGCTGATCTTGTCTCCAACACCTTCTTTAGCTCCATTCCAGGTGCTCTCTATTGGCCTATGTTTGTGGTGGCCGTGCTCGCCTCCATCGTTGCTAGCCAAGCGATGATCTCGGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGCTGCTTCCCTAGAGTTAAAGTTATTCACACTTCTTCCAAGTATGAGGGTCAAGTTTACATCCCTGAAGTTAACTACCTTCTTATGGTGGCTTGTCTTGGAGTTACTCTTGGGTTCAAAGATACAACTAGAATCGGAAATGCTTATGGCATTGCAGTGGTGTTCGTAATGACACTTACTTCAAGTTTCTTGGTGCTCATCATGATCATGATATGGAAATCTCACATACTCGTCATACTATCCTATGTTTTCACCATTGGCTTATTGGAGCTTTTCTACCTAAGTTCAGTCCTTTACAAGTTCGATCGAGGGGGCTATCTTCCTTTAGCTTTTGCGGGGTTTCTCATGATAATAATGTACATTTGGTATGACGTCCATAGGAGAAAATACTACTACGAGCTTGAGCACAAGATTTCTCCTCAAAAGCTCAAGGACATGCCATCTCTCACAACTCTTAATCGTGTCCCTGGCCTCGCCTTGTTCTACTCCGAGCTTGTCCAAGGCATACCCCCAATCTTCAAGCATTATATAGCCAACATTCCCACTCTCCAAAGAGTCCTCATTTTCGTGTCCTTCAAGTCCCTCCCAATAAGCAGAGTCTTAATGGAAGAGCGGTTCCTGTTTAGACGAGTCGAGCCTGATGACCTCAACGTGTTTCGATGCGTGGTTCGATATGGGTACAAAGATATCATCCACGAGCAGGAGTCATTCGAGAGAGTACTAGTGGAGAAATTAAAGATGTTTATAGAAGAGGAGTCATGGATGTTACAAAACGAAGATAACGATAGATCGAGCAAAGTATATGGAGGGATAGAGGTGGTGGATAGAGCTTGGAGAGATGGAATTGTTCACTTGATTGGACAAAACGAGGTGGTGGCAAGTAATGGGTCAGGGTTAGCTAAACGGGTTTTGATCAATTATGCTTACAATGCATTAAGGAGAAATTTGAGACAAAATGAAGATATCTTCTACATCCCTAGAGAGCGTATGCTCAAAGTAGGAATGACGTATGAGCTTTAG 2232 46.64 MEADRTAENDHCPDLQQSSGESRPNLTETNLRRHDSLDFESRSVKAAGKAAASWGVILQLAFQSVGIVYGDIGTSPLYVYASTFSEGIKHNDDVLGVLSLILYTLTLIPLVKYVFLVLQANDNGEGGTFALYSLLCRYAKIGLIPSEQVEDQEVSNFQVELPTNRLKMASCLKSKLENSRAAKVFLLFATMLGTSMVIGDSVLTPSISVLSAVGGIKNATSTMTQEKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICTWFVLIGAIGFYNFLKFDPSVIKAVNPIYIYYYFKRNKRDAWISLGGAVLSITGTEALFADLGHFSVMSIRLSMCCVAYPALVSAYVGQASFLREHADLVSNTFFSSIPGALYWPMFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVIHTSSKYEGQVYIPEVNYLLMVACLGVTLGFKDTTRIGNAYGIAVVFVMTLTSSFLVLIMIMIWKSHILVILSYVFTIGLLELFYLSSVLYKFDRGGYLPLAFAGFLMIIMYIWYDVHRRKYYYELEHKISPQKLKDMPSLTTLNRVPGLALFYSELVQGIPPIFKHYIANIPTLQRVLIFVSFKSLPISRVLMEERFLFRRVEPDDLNVFRCVVRYGYKDIIHEQESFERVLVEKLKMFIEEESWMLQNEDNDRSSKVYGGIEVVDRAWRDGIVHLIGQNEVVASNGSGLAKRVLINYAYNALRRNLRQNEDIFYIPRERMLKVGMTYEL 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7779664 7783530 + CmaCh17G011100.1 Cma17g01110 313005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g01110 743 MobiDBLite consensus disorder prediction 1 32 - -
Cma17g01110 743 Pfam K+ potassium transporter 61 633 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma17g01110 743 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 26 742 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma17g01110 743 TIGRFAM kup: potassium uptake protein 60 742 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma17g01110 743 MobiDBLite consensus disorder prediction 12 26 - -
Cma17g01110 743 PANTHER POTASSIUM TRANSPORTER 26 742 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g00406 Cma17g01110 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00406 Cma-Chr8:2327699 Cma17g01110 Cma-Chr17:7779664 0 dispersed
Cma14g00890 Cma-Chr14:4609242 Cma17g01110 Cma-Chr17:7779664 0 dispersed
Cma14g01387 Cma-Chr14:10706082 Cma17g01110 Cma-Chr17:7779664 0 dispersed
Cma17g01110 Cma-Chr17:7779664 Cma04g01913 Cma-Chr4:10149523 0 dispersed
Cma17g01109 Cma-Chr17:7776646 Cma17g01110 Cma-Chr17:7779664 2.84E-17 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g01110 K03549 - csv:101213493 1301.58