Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g01319 ATGGCTTCCCTCTCTACCTGGTTCCGCTACATCGCCCACAAGCTCGAGTACTCCGTCTCTCTCAGTTGGAAGAACTATAAAGGAGGTCAAATTACTGACAAAGAAGTAGGTGATGCCGTTTGGAAGAATTTACTTCAGGGAAAGCTCACATACCTCCATTGGATTAAGGGAGAGGAGATGGCCCCAACTGTAGGTGTGGCAGGGGGAACGCTTCTCATACGCAAATTACCTGCTGCAGATCCAACGAGTGTTTTTGTTGGGGATGTCGTGGTGGTGAAGGAGCCAGAAAAACCAGAAAACTATCTTGTGAGAAGATTGGCTGCAGTTGAAGGGTATGAAATGCTGTCTACAGATGAAAAAGATAAGCCTTTCGTACTTGAGAAGGACCAGTGCTGGTTGTTGGCAGATAATGAGGAGTTGAAGCCGAAGGAGGCGTACGACAGTCGAACATTTGGTCCAGTTACGATGTCAAACATTGTAGGCAGAGCCATATATTGCCTACGAACCGCTGTCGACCATGGCCCAGTGCAGAATAGCATGAAAAAGGATTCACCAATACTGGAAATCGAACTGGATGTCGATGAGATGGCGAAAAATCACAAGGCCTGA 609 47.13 MASLSTWFRYIAHKLEYSVSLSWKNYKGGQITDKEVGDAVWKNLLQGKLTYLHWIKGEEMAPTVGVAGGTLLIRKLPAADPTSVFVGDVVVVKEPEKPENYLVRRLAAVEGYEMLSTDEKDKPFVLEKDQCWLLADNEELKPKEAYDSRTFGPVTMSNIVGRAIYCLRTAVDHGPVQNSMKKDSPILEIELDVDEMAKNHKA 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8903507 8906714 - CmaCh17G013190.1 Cma17g01319 313214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g01319 202 CDD S26_SPase_I 93 163 IPR019533 GO:0004252|GO:0006465
Cma17g01319 202 PANTHER OSJNBA0068L06.9 PROTEIN 1 202 - -
Cma17g01319 202 SUPERFAMILY LexA/Signal peptidase 51 167 IPR036286 -
Cma17g01319 202 Gene3D Umud Fragment, subunit A 47 181 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g00274 Cma17g01319 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma17g01319 Cma-Chr17:8903507 Cma07g00119 Cma-Chr7:638297 2.85E-07 dispersed
Cma17g01319 Cma-Chr17:8903507 Cma08g00274 Cma-Chr8:1598140 2.06E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g01319 - - csv:101216347 356.295