Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma17g01386 ATGGATCGTTGGGTGACAGCACTTGGCGCCCTGGCCATCGGCGCAGTCTTCCATTTTGTGTTGAGTCGTATCTTGTGGCGCAAACAAAAGCTCCCTCCTGGTCCGCTTGCCTTGCCGCTTATAGGCAACCCCATATGGCTCTTCAAGCCACTTTCCGAGCTGGAAGCCACCCTCCGCCATTACCATTCCAAATACGGTCCAGTAATCACCCTCCACTTCGGCAACACTCCTTCCATTTTCATCGCCAGCCACACTGCCGCTCACCAGGCCTTGGTTCAAAACGGCGCTGTCTTCGCAGACCGCTTCCCTATCATGGAGACTGTCAAAATCATCACCAGCAACCAACACAACATCAGCACCTCCTTCTACGGCCCCACCTGGCGCATCCTCCGCCGCAACCTCACCTCCGAGCTCCTCCATCCATCTCGCTTGAAGGCTCACTCCCCTTCTCGCAAATGGGTCTTGGATGATCTCCTCCATCGCCTCATCCAACATTCCCACCCCACCTCCCCTGCCCAATCCCCTGTTCCTGTAACACTCGTGGACCATCTTCGCCACGCCATATTTTGCCTGGCTGCCGCTATGTGTTTTGGGGAGAAATTTGATAGCAAATTAATCGATGAAATACAAGAATCTCAACGTGGGGTTTTGTTGAACATCGGTAAATTCAATGATCTTAACTTCTGGCCTCCGAAATTGGGGAAAATTTTGTTCCGGAAGCGTTGGGAAGAGATTCGTCAGCTACGTAAGCGGCAAGAAAATCTGTTACTTCCATTGATCAATGCAAGAAAGAAGATAGTCAAAGAGAAGGGCGGATCAGGTGATGGGAATAAGAACCCGATTCCGTACGTTGATACTCTGTTTGATTTAGAAATTGCAGAGAACAACGACGAGAAGAGGAAGAGAAAATTGGTGGAAGATGAACTGATAACTTTATGCACAGAGTTCATAGACGCCATCACGGACACTACGGTGGTGTCATTGCAATGGATAATGGCGAATTTGGTGAAATACCCAGAAATTCAAGAGAAGCTGTTCAAGGAAATGAAAGAAGTGGTGGGAGAGAGTGCGAAGGAGGAGATAGAAGAGGAGGATTTGCAGAAGATGACATATCTGAAAGCCGTAGTGCTTGAAGGGCTACGGCGGCACCCGCCGGGGCATCTGCTGCTGCCTCATACAGTGACGGAGGACAGTGTTCTGGAGGGCGGATACAGGGTGCCAAAAGGAACGTCGGTGAACTTTATGGTTGCCGACATGGGTTGGGACCCGAAGGTGTGGCCGGATCCGATGGCGTTCAAGCCGGAGAGGTTCTTGACGGATAGGTCGGAGGGTGGGGTTGAGGTGGAAGTTGATATCACAGGGAGTAAGGAAATAAAGATGATGCCGTTCGGGGCTGGGAGGAGGTTCTGCCCGGGATTCGCTTTGGGGTTGCTGCATTTGGAGTATTTCGTTGGGAATTTGGTGTGGAACTTCAAGTGGACGCCTGCCGGAGATGTTGATCTGTGTGAGAAGCTGGAATCTGCTGTCACCATGAAACAACCGCTGCTCTCCTACTTGTCGCCGAGGGCGGTTTCTAGTTAG 1581 51.23 MDRWVTALGALAIGAVFHFVLSRILWRKQKLPPGPLALPLIGNPIWLFKPLSELEATLRHYHSKYGPVITLHFGNTPSIFIASHTAAHQALVQNGAVFADRFPIMETVKIITSNQHNISTSFYGPTWRILRRNLTSELLHPSRLKAHSPSRKWVLDDLLHRLIQHSHPTSPAQSPVPVTLVDHLRHAIFCLAAAMCFGEKFDSKLIDEIQESQRGVLLNIGKFNDLNFWPPKLGKILFRKRWEEIRQLRKRQENLLLPLINARKKIVKEKGGSGDGNKNPIPYVDTLFDLEIAENNDEKRKRKLVEDELITLCTEFIDAITDTTVVSLQWIMANLVKYPEIQEKLFKEMKEVVGESAKEEIEEEDLQKMTYLKAVVLEGLRRHPPGHLLLPHTVTEDSVLEGGYRVPKGTSVNFMVADMGWDPKVWPDPMAFKPERFLTDRSEGGVEVEVDITGSKEIKMMPFGAGRRFCPGFALGLLHLEYFVGNLVWNFKWTPAGDVDLCEKLESAVTMKQPLLSYLSPRAVSS 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9241617 9243197 + CmaCh17G013860.1 Cma17g01386 313281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma17g01386 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Cma17g01386 526 Gene3D Cytochrome P450 26 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 SUPERFAMILY Cytochrome P450 24 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 Pfam Cytochrome P450 32 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma17g01386 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 521 - -
Cma17g01386 526 PANTHER CYTOCHROME P450 9 521 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma17g01386 Cma-Chr17:9241617 Cma20g00929 Cma-Chr20:4568111 0 dispersed
Cma17g01386 Cma-Chr17:9241617 Cma02g00476 Cma-Chr2:2508353 1.58E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma17g01386 K24184 - csv:101204774 790.801