Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma17g01387 | ATGGAAACCAGCAGCTATTTTGCAGCGTTGGTTACTCTCTTGGCTCTGGGTTCCATTTTTTTGTTGCAGAAAAGAAAGAACAGAGCCAAAAATCTCCCTCCGAGTCCCTGGGCTCTGCCCATCCTTGGTCATCTTCATCTCCTCAAGCACCCAGTCCACAGAACTTTACAGTCCCTCGCCCAGAAACACGGCCCAATTTTCACTCTCCGACTCGGCTCCCGTCTCGCCATCGTCGTATCATCGGCACCAGCCGTCGAAGAATGCTTCACCACAAACGACATCGTTTTCGCTAACCGCCCTCAATTCGTTTCCGGCATGTACCTCAGCTACGGCAACACCACGATGGGGGCTGCCCCGTACGGCGATCACTGGCGCAATCTAAGGCGCTTGAGCTCCACAGAAATCTTGTCGTCGATCCGCCTCAACATGTCGGCCGGTATCCGGAAGGAAGAAGTCAACATTTTACTCCGCAAATTGTATCAATTTTCGAGGCATGATTTTGGGAAAGTGAAATTGAAAACCCTGTTTTCGGAGCTGACATTCAACATAATTATGAGAATGGTGGCCGGAAAACGGTATTTCGGCGACGAAGTGACGGAATTGGAAGAGGCGAAAGAGTTCCGAGAAATTATGGAGACGTCGTTTCGATTGGGGTCGTACCCTGGTGATTTCTTACCATTCCTGAAGTGGGTTGATCGGCAATACCCCAAAAGGATGAAGAGTCTGGGCAGAGCCCTGGATTCGTTGCTGCAGAATTTGGTGGATGAACACCGGAGATATCAAAATGAAGGGAAAAAGCTTGATACCATGATCAGCCATCTGCTCTGTTTGCAGGAGTCTCAGCCCGAGTATTACTCAGATGAAATTATCAAAGGCCTCATCGTTACAATTTTAACAGCAGCGACGGAAACATCGTCTGTGACGATAGAATGGGCAATGTCCAATCTACTCAACCATCCAGAGGCATTAAACAAGGCCAGGGCTGAGCTTGACGCACAGATTGGGCAAGATCGGCTACTGGAAGAAGAAGACATCCCCACTCTGCCATACCTCCAGAACGTGATCTCTGAGACACTGCGCCTATACCCAGCAGCTCCACTCTTGGCGCCACATTTTTCATCCGAGAGTTGTTCTCTTGGGGGATACCATATTCCTGCTGGCACTACCATGTTGGTGAATGCGTGGGCGGTGCAAAGGGATCCCGAAGTTTGGGAGGACCCGACAAGGTTTAAACCTGAGAGGTTCGAGAGCGGGGGAGTGGCTGCCAACGCTTACAAATTCTTGCCGTTTGGATTGGGGAGGAGGGCTTGTCCTGGGATGGGCATGGCCAACCGTGTGGTGGGCTTGGCTTTGGGGTCACTGATTCAGAGCTTTGAGTGGAAGAGGGTGAGTGACGAGGAATTGGACATGACTGAAAGCCAAGGGATCTCTATGTACAAAGTTGAGCCATTGGAGGCCTTATGTAGAGCTCGCCCCATCATGAAAAACCTTGCATTTCATTGA | 1503 | 50.37 | METSSYFAALVTLLALGSIFLLQKRKNRAKNLPPSPWALPILGHLHLLKHPVHRTLQSLAQKHGPIFTLRLGSRLAIVVSSAPAVEECFTTNDIVFANRPQFVSGMYLSYGNTTMGAAPYGDHWRNLRRLSSTEILSSIRLNMSAGIRKEEVNILLRKLYQFSRHDFGKVKLKTLFSELTFNIIMRMVAGKRYFGDEVTELEEAKEFREIMETSFRLGSYPGDFLPFLKWVDRQYPKRMKSLGRALDSLLQNLVDEHRRYQNEGKKLDTMISHLLCLQESQPEYYSDEIIKGLIVTILTAATETSSVTIEWAMSNLLNHPEALNKARAELDAQIGQDRLLEEEDIPTLPYLQNVISETLRLYPAAPLLAPHFSSESCSLGGYHIPAGTTMLVNAWAVQRDPEVWEDPTRFKPERFESGGVAANAYKFLPFGLGRRACPGMGMANRVVGLALGSLIQSFEWKRVSDEELDMTESQGISMYKVEPLEALCRARPIMKNLAFH | 500 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 9243802 | 9245524 | - | CmaCh17G013870.1 | Cma17g01387 | 313282 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma17g01387 | 500 | Pfam | Cytochrome P450 | 33 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | Gene3D | Cytochrome P450 | 18 | 489 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PANTHER | CYTOCHROME P450 | 9 | 496 | - | - | |
Cma17g01387 | 500 | SUPERFAMILY | Cytochrome P450 | 33 | 491 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 352 | 370 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 393 | 417 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 9 | 496 | - | - | |
Cma17g01387 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506|GO:0016705 | |
Cma17g01387 | 500 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | P450 superfamily signature | 353 | 364 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma17g01387 | 500 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01805 | Cma-Chr1:12029068 | Cma17g01387 | Cma-Chr17:9243802 | 6.74E-173 | dispersed | |
Cma03g00950 | Cma-Chr3:6782028 | Cma17g01387 | Cma-Chr17:9243802 | 0 | dispersed | |
Cma09g00267 | Cma-Chr9:1109388 | Cma17g01387 | Cma-Chr17:9243802 | 0 | dispersed | |
Cma09g00271 | Cma-Chr9:1122974 | Cma17g01387 | Cma-Chr17:9243802 | 5.76E-170 | dispersed | |
Cma17g01387 | Cma-Chr17:9243802 | Cma20g00978 | Cma-Chr20:5097701 | 4.09E-179 | dispersed | |
Cma17g01387 | Cma-Chr17:9243802 | Cma08g00036 | Cma-Chr8:187633 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma17g01387 | K13260 | K25488 | csv:101207828 | 775.007 |