Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma18g00027 ATGGCTTCCCTCCTCTCTTCTGCTTTCTTCCTCCTCTTTCTGTTCTTCCACTTCTTCTCTGCAACTTGCACTGAATTCCTCGTCGGTGATGAACATGGGTGGGCTGTCCCTCAGCATAAACACGCTGATAGATACAATAAATGGGCCTCCCATAACAGATTCAACGTTGATGACACCCTCCATTTCAAGTTCGAGAAAGATTCAGTGATGGAGGTGACAGAGGAAGAGTACAAGCAATGCCTTTCTTCGAAGCCTCTGTTGTACAACAACAATGGCGACGCAGTGGTGAGAGTTGAGAGAGCAGGGCTGTTCTATTTCATAAGTGGAGTTTCAGGGCACTGTGAGAAAGGGCAGAGGATGATAATCAAAGTGTTGGAACCGCTCAGCCCTCCGCAGCCACCCACTGCTCCGCCCCAAAACAACAACACCCCACTCTCTGTATCATCTCCAATGCTTGCACTTTTCTTCATGTTCTTTGTTTCCTTTCTGTTCATTTGA 498 47.39 MASLLSSAFFLLFLFFHFFSATCTEFLVGDEHGWAVPQHKHADRYNKWASHNRFNVDDTLHFKFEKDSVMEVTEEEYKQCLSSKPLLYNNNGDAVVRVERAGLFYFISGVSGHCEKGQRMIIKVLEPLSPPQPPTAPPQNNNTPLSVSSPMLALFFMFFVSFLFI 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 104630 105199 + CmaCh18G000270.1 Cma18g00027 313365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma18g00027 165 PANTHER EARLY NODULIN-LIKE PROTEIN 6 9 158 - -
Cma18g00027 165 Pfam Plastocyanin-like domain 34 118 IPR003245 GO:0009055
Cma18g00027 165 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Cma18g00027 165 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Cma18g00027 165 PANTHER BLUE COPPER PROTEIN 9 158 IPR039391 GO:0009055
Cma18g00027 165 Gene3D - 22 128 IPR008972 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma13g01046 Cma18g00027 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02660 Cma-Chr4:18083173 Cma18g00027 Cma-Chr18:104630 3.60E-32 dispersed
Cma18g00027 Cma-Chr18:104630 Cma09g00857 Cma-Chr9:4202759 6.31E-23 dispersed
Cma17g00783 Cma-Chr17:6248468 Cma18g00027 Cma-Chr18:104630 3.58E-34 transposed
Cma13g01046 Cma-Chr13:7973924 Cma18g00027 Cma-Chr18:104630 2.79E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma18g00027 - - cmo:103495780 200.29