Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma18g00027 | ATGGCTTCCCTCCTCTCTTCTGCTTTCTTCCTCCTCTTTCTGTTCTTCCACTTCTTCTCTGCAACTTGCACTGAATTCCTCGTCGGTGATGAACATGGGTGGGCTGTCCCTCAGCATAAACACGCTGATAGATACAATAAATGGGCCTCCCATAACAGATTCAACGTTGATGACACCCTCCATTTCAAGTTCGAGAAAGATTCAGTGATGGAGGTGACAGAGGAAGAGTACAAGCAATGCCTTTCTTCGAAGCCTCTGTTGTACAACAACAATGGCGACGCAGTGGTGAGAGTTGAGAGAGCAGGGCTGTTCTATTTCATAAGTGGAGTTTCAGGGCACTGTGAGAAAGGGCAGAGGATGATAATCAAAGTGTTGGAACCGCTCAGCCCTCCGCAGCCACCCACTGCTCCGCCCCAAAACAACAACACCCCACTCTCTGTATCATCTCCAATGCTTGCACTTTTCTTCATGTTCTTTGTTTCCTTTCTGTTCATTTGA | 498 | 47.39 | MASLLSSAFFLLFLFFHFFSATCTEFLVGDEHGWAVPQHKHADRYNKWASHNRFNVDDTLHFKFEKDSVMEVTEEEYKQCLSSKPLLYNNNGDAVVRVERAGLFYFISGVSGHCEKGQRMIIKVLEPLSPPQPPTAPPQNNNTPLSVSSPMLALFFMFFVSFLFI | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 104630 | 105199 | + | CmaCh18G000270.1 | Cma18g00027 | 313365 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma18g00027 | 165 | PANTHER | EARLY NODULIN-LIKE PROTEIN 6 | 9 | 158 | - | - | |
Cma18g00027 | 165 | Pfam | Plastocyanin-like domain | 34 | 118 | IPR003245 | GO:0009055 | |
Cma18g00027 | 165 | SUPERFAMILY | Cupredoxins | 23 | 125 | IPR008972 | - | |
Cma18g00027 | 165 | ProSiteProfiles | Phytocyanin domain profile. | 24 | 126 | IPR003245 | GO:0009055 | |
Cma18g00027 | 165 | PANTHER | BLUE COPPER PROTEIN | 9 | 158 | IPR039391 | GO:0009055 | |
Cma18g00027 | 165 | Gene3D | - | 22 | 128 | IPR008972 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma13g01046 | Cma18g00027 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02660 | Cma-Chr4:18083173 | Cma18g00027 | Cma-Chr18:104630 | 3.60E-32 | dispersed | |
Cma18g00027 | Cma-Chr18:104630 | Cma09g00857 | Cma-Chr9:4202759 | 6.31E-23 | dispersed | |
Cma17g00783 | Cma-Chr17:6248468 | Cma18g00027 | Cma-Chr18:104630 | 3.58E-34 | transposed | |
Cma13g01046 | Cma-Chr13:7973924 | Cma18g00027 | Cma-Chr18:104630 | 2.79E-56 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma18g00027 | - | - | cmo:103495780 | 200.29 |